RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 HSPA4P34932 840 aa22.73■■□□□ 1.23
TSPAN4-210ENST00000464987 FOXD4L5Q5VV16 416 aaPredicted RBP22.73■■□□□ 1.23
TSPAN4-210ENST00000464987 CNTROBQ8N137 903 aa22.73■■□□□ 1.23
TSPAN4-210ENST00000464987 FOXD4L4Q8WXT5 416 aaPredicted RBP22.73■■□□□ 1.23
TSPAN4-210ENST00000464987 CWC27Q6UX04 472 aaKnown RBP22.72■■□□□ 1.23
TSPAN4-210ENST00000464987 DDX49Q9Y6V7 483 aaKnown RBP22.72■■□□□ 1.23
TSPAN4-210ENST00000464987 USP42Q9H9J4 1324 aaKnown RBP22.72■■□□□ 1.23
TSPAN4-210ENST00000464987 CYP27B1O15528 508 aa22.72■■□□□ 1.23
TSPAN4-210ENST00000464987 PTMSP20962 102 aa22.72■■□□□ 1.23
TSPAN4-210ENST00000464987 MRE11P49959 708 aa22.72■■□□□ 1.23
TSPAN4-210ENST00000464987 RIC3Q7Z5B4 369 aa22.72■■□□□ 1.23
TSPAN4-210ENST00000464987 CLASRPQ8N2M8 674 aaKnown RBP22.72■■□□□ 1.23
TSPAN4-210ENST00000464987 SPG7Q9UQ90 795 aa22.71■■□□□ 1.23
TSPAN4-210ENST00000464987 USP16Q9Y5T5 823 aa22.71■■□□□ 1.23
TSPAN4-210ENST00000464987 DDX58O95786 925 aaKnown RBP22.7■■□□□ 1.23
TSPAN4-210ENST00000464987 IFNL2Q8IZJ0 200 aa22.7■■□□□ 1.23
TSPAN4-210ENST00000464987 XAGE3Q8WTP9 111 aa22.7■■□□□ 1.23
TSPAN4-210ENST00000464987 IL17RAQ96F46 866 aa22.7■■□□□ 1.23
TSPAN4-210ENST00000464987 LSG1Q9H089 658 aaKnown RBP22.7■■□□□ 1.23
TSPAN4-210ENST00000464987 LMBRD1Q9NUN5 540 aa22.7■■□□□ 1.23
TSPAN4-210ENST00000464987 UTYO14607 1347 aa22.7■■□□□ 1.22
TSPAN4-210ENST00000464987 SASH1O94885 1247 aa22.7■■□□□ 1.22
TSPAN4-210ENST00000464987 COPS6Q7L5N1 327 aa22.7■■□□□ 1.22
TSPAN4-210ENST00000464987 TTC41PQ6P2S7 1318 aa22.7■■□□□ 1.22
TSPAN4-210ENST00000464987 RAD50Q92878 1312 aa22.7■■□□□ 1.22
TSPAN4-210ENST00000464987 TNS3Q68CZ2 1445 aa22.69■■□□□ 1.22
TSPAN4-210ENST00000464987 CUL4AQ13619 759 aa22.69■■□□□ 1.22
TSPAN4-210ENST00000464987 KLHL40Q2TBA0 621 aa22.69■■□□□ 1.22
TSPAN4-210ENST00000464987 KLHDC4Q8TBB5 520 aa22.69■■□□□ 1.22
TSPAN4-210ENST00000464987 GLRX3O76003 335 aaKnown RBP22.69■■□□□ 1.22
TSPAN4-210ENST00000464987 MCM2P49736 904 aa22.68■■□□□ 1.22
TSPAN4-210ENST00000464987 HSPA2P54652 639 aa22.68■■□□□ 1.22
TSPAN4-210ENST00000464987 RASEFQ8IZ41 740 aa22.68■■□□□ 1.22
TSPAN4-210ENST00000464987 JARID2Q92833 1246 aaPredicted RBP22.68■■□□□ 1.22
TSPAN4-210ENST00000464987 AACSQ86V21 672 aa22.67■■□□□ 1.22
TSPAN4-210ENST00000464987 SIL1Q9H173 461 aa22.67■■□□□ 1.22
TSPAN4-210ENST00000464987 DCCP43146 1447 aa22.67■■□□□ 1.22
TSPAN4-210ENST00000464987 NEURL1BA8MQ27 555 aa22.67■■□□□ 1.22
TSPAN4-210ENST00000464987 EPHA10Q5JZY3 1008 aa22.67■■□□□ 1.22
TSPAN4-210ENST00000464987 LRP10Q7Z4F1 713 aa22.67■■□□□ 1.22
TSPAN4-210ENST00000464987 MYD88Q99836 296 aa22.67■■□□□ 1.22
TSPAN4-210ENST00000464987 ECHDC1Q9NTX5 307 aa22.67■■□□□ 1.22
TSPAN4-210ENST00000464987 SNX14Q9Y5W7 946 aa22.67■■□□□ 1.22
TSPAN4-210ENST00000464987 PKD1L3Q7Z443 1732 aa22.67■■□□□ 1.22
TSPAN4-210ENST00000464987 IFIT2P09913 472 aaKnown RBP22.66■■□□□ 1.22
TSPAN4-210ENST00000464987 EAF2Q96CJ1 260 aaPredicted RBP22.66■■□□□ 1.22
TSPAN4-210ENST00000464987 AFDNP55196 1824 aaKnown RBP22.66■■□□□ 1.22
TSPAN4-210ENST00000464987 XIRP1Q702N8 1843 aaKnown RBP22.66■■□□□ 1.22
TSPAN4-210ENST00000464987 UBE2Q2Q8WVN8 375 aa22.66■■□□□ 1.22
TSPAN4-210ENST00000464987 CCDC8Q9H0W5 538 aaPredicted RBP22.66■■□□□ 1.22
TSPAN4-210ENST00000464987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.66■■□□□ 1.22
TSPAN4-210ENST00000464987 TLR7Q9NYK1 1049 aaKnown RBP22.66■■□□□ 1.22
TSPAN4-210ENST00000464987 PRPF40AO75400 957 aaKnown RBP22.65■■□□□ 1.22
TSPAN4-210ENST00000464987 LARP1Q6PKG0 1096 aaKnown RBP22.65■■□□□ 1.22
TSPAN4-210ENST00000464987 CADPS2Q86UW7 1296 aa22.65■■□□□ 1.22
TSPAN4-210ENST00000464987 FAM43AQ8N2R8 423 aa22.65■■□□□ 1.22
TSPAN4-210ENST00000464987 SPATA31A3Q5VYP0 1347 aa22.65■■□□□ 1.22
TSPAN4-210ENST00000464987 EPB41L2O43491 1005 aaKnown RBP22.65■■□□□ 1.22
TSPAN4-210ENST00000464987 ERC1Q8IUD2 1116 aa22.65■■□□□ 1.22
TSPAN4-210ENST00000464987 LARP6Q9BRS8 491 aaKnown RBP22.65■■□□□ 1.22
TSPAN4-210ENST00000464987 RRAGDQ9NQL2 400 aaPredicted RBP22.65■■□□□ 1.22
TSPAN4-210ENST00000464987 MRC1P22897 1456 aa22.64■■□□□ 1.22
TSPAN4-210ENST00000464987 NCLP19338 710 aaKnown RBP22.64■■□□□ 1.21
TSPAN4-210ENST00000464987 PTH1RQ03431 593 aa22.64■■□□□ 1.21
TSPAN4-210ENST00000464987 GCKRQ14397 625 aa22.64■■□□□ 1.21
TSPAN4-210ENST00000464987 DCAF5Q96JK2 942 aa22.64■■□□□ 1.21
TSPAN4-210ENST00000464987 TCHHQ07283 1943 aa22.64■■□□□ 1.21
TSPAN4-210ENST00000464987 METTL22Q9BUU2 404 aaPredicted RBP22.63■■□□□ 1.21
TSPAN4-210ENST00000464987 G3BP1Q13283 466 aaKnown RBP eCLIP22.63■■□□□ 1.21
TSPAN4-210ENST00000464987 CAVIN1Q6NZI2 390 aaKnown RBP22.63■■□□□ 1.21
TSPAN4-210ENST00000464987 TTC5Q8N0Z6 440 aa22.63■■□□□ 1.21
TSPAN4-210ENST00000464987 DIAPH3Q9NSV4 1193 aa22.63■■□□□ 1.21
TSPAN4-210ENST00000464987 ISY1Q9ULR0 285 aaKnown RBP22.63■■□□□ 1.21
TSPAN4-210ENST00000464987 HDAC5Q9UQL6 1122 aa22.63■■□□□ 1.21
TSPAN4-210ENST00000464987 SNRPA1P09661 255 aaKnown RBP22.62■■□□□ 1.21
TSPAN4-210ENST00000464987 CPA1P15085 419 aa22.62■■□□□ 1.21
TSPAN4-210ENST00000464987 NEXNQ0ZGT2 675 aa22.62■■□□□ 1.21
TSPAN4-210ENST00000464987 GPT2Q8TD30 523 aa22.62■■□□□ 1.21
TSPAN4-210ENST00000464987 ARFGEF2Q9Y6D5 1785 aa22.62■■□□□ 1.21
TSPAN4-210ENST00000464987 BRD1O95696 1058 aa22.62■■□□□ 1.21
TSPAN4-210ENST00000464987 ANKRD13DQ6ZTN6 518 aa22.62■■□□□ 1.21
TSPAN4-210ENST00000464987 INTS4Q96HW7 963 aaKnown RBP22.62■■□□□ 1.21
TSPAN4-210ENST00000464987 GLI3P10071 1580 aa22.61■■□□□ 1.21
TSPAN4-210ENST00000464987 ABCC6O95255 1503 aa22.61■■□□□ 1.21
TSPAN4-210ENST00000464987 KIAA1211Q6ZU35 1233 aa22.61■■□□□ 1.21
TSPAN4-210ENST00000464987 TTC14Q96N46 770 aa22.61■■□□□ 1.21
TSPAN4-210ENST00000464987 NSFL1CQ9UNZ2 370 aaKnown RBP22.61■■□□□ 1.21
TSPAN4-210ENST00000464987 RBM27Q9P2N5 1060 aaKnown RBP22.6■■□□□ 1.21
TSPAN4-210ENST00000464987 AK2P54819 239 aa22.59■■□□□ 1.21
TSPAN4-210ENST00000464987 CABP4P57796 275 aa22.59■■□□□ 1.21
TSPAN4-210ENST00000464987 GPATCH3Q96I76 525 aa22.59■■□□□ 1.21
TSPAN4-210ENST00000464987 FMNL2Q96PY5 1086 aa22.59■■□□□ 1.21
TSPAN4-210ENST00000464987 ATP5J2-PTCD1G3V325 749 aa22.59■■□□□ 1.21
TSPAN4-210ENST00000464987 PTCD1O75127 700 aaKnown RBP22.59■■□□□ 1.21
TSPAN4-210ENST00000464987 ADCK5Q3MIX3 580 aa22.58■■□□□ 1.21
TSPAN4-210ENST00000464987 EVI5LQ96CN4 794 aa22.58■■□□□ 1.21
TSPAN4-210ENST00000464987 FAM227BQ96M60 508 aa22.58■■□□□ 1.21
TSPAN4-210ENST00000464987 BOLA2Q9H3K6 86 aa22.58■■□□□ 1.21
TSPAN4-210ENST00000464987 FOXD4L6Q3SYB3 417 aaPredicted RBP22.58■■□□□ 1.2
TSPAN4-210ENST00000464987 FOXD4L3Q6VB84 417 aaPredicted RBP22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms