RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 NBPF6Q5VWK0 638 aa13.35□□□□□ -0.27
APP-213ENST00000464867 NBPF4Q96M43 638 aa13.35□□□□□ -0.27
APP-213ENST00000464867 CRISPLD2Q9H0B8 497 aa13.35□□□□□ -0.27
APP-213ENST00000464867 TERF2IPQ9NYB0 399 aa13.35□□□□□ -0.27
APP-213ENST00000464867 LHX6Q9UPM6 363 aa13.35□□□□□ -0.27
APP-213ENST00000464867 EDC4Q6P2E9 1401 aaKnown RBP13.35□□□□□ -0.27
APP-213ENST00000464867 SMG6Q86US8 1419 aaKnown RBP13.35□□□□□ -0.27
APP-213ENST00000464867 MAP3K19Q56UN5 1328 aa13.35□□□□□ -0.27
APP-213ENST00000464867 RGS19P49795 217 aa13.34□□□□□ -0.27
APP-213ENST00000464867 USHBP1Q8N6Y0 703 aa13.34□□□□□ -0.27
APP-213ENST00000464867 PTCD2Q8WV60 388 aaKnown RBP13.34□□□□□ -0.27
APP-213ENST00000464867 COG3Q96JB2 828 aa13.34□□□□□ -0.27
APP-213ENST00000464867 CD163L1Q9NR16 1453 aa13.34□□□□□ -0.27
APP-213ENST00000464867 CNTNAP1P78357 1384 aa13.33□□□□□ -0.27
APP-213ENST00000464867 TMOD3Q9NYL9 352 aa13.33□□□□□ -0.28
APP-213ENST00000464867 MAP2P11137 1827 aaKnown RBP13.33□□□□□ -0.28
APP-213ENST00000464867 GYS1P13807 737 aa13.32□□□□□ -0.28
APP-213ENST00000464867 ITPK1Q13572 414 aa13.32□□□□□ -0.28
APP-213ENST00000464867 ARHGEF1Q92888 912 aaKnown RBP13.32□□□□□ -0.28
APP-213ENST00000464867 WBP1LQ9NX94 342 aa13.32□□□□□ -0.28
APP-213ENST00000464867 CCDC88AQ3V6T2 1871 aa13.31□□□□□ -0.28
APP-213ENST00000464867 CYP27B1O15528 508 aa13.31□□□□□ -0.28
APP-213ENST00000464867 CHRNA5P30532 468 aa13.31□□□□□ -0.28
APP-213ENST00000464867 RASSF7Q02833 373 aa13.31□□□□□ -0.28
APP-213ENST00000464867 CFAP44Q96MT7 982 aa13.31□□□□□ -0.28
APP-213ENST00000464867 PDE4DIPQ5VU43 2346 aa13.3□□□□□ -0.28
APP-213ENST00000464867 VEGFBP49765 207 aa13.3□□□□□ -0.28
APP-213ENST00000464867 RTL1A6NKG5 1358 aa13.3□□□□□ -0.28
APP-213ENST00000464867 MAP2K1Q02750 393 aaPredicted RBP13.29□□□□□ -0.28
APP-213ENST00000464867 SLC12A5Q9H2X9 1139 aa13.29□□□□□ -0.28
APP-213ENST00000464867 ASAP1Q9ULH1 1129 aa13.29□□□□□ -0.28
APP-213ENST00000464867 TIAM2Q8IVF5 1701 aa13.29□□□□□ -0.28
APP-213ENST00000464867 KDM6AO15550 1401 aaPredicted RBP13.29□□□□□ -0.28
APP-213ENST00000464867 HSPA8P11142 646 aaKnown RBP13.28□□□□□ -0.28
APP-213ENST00000464867 RC3H1Q5TC82 1133 aaKnown RBP13.28□□□□□ -0.28
APP-213ENST00000464867 RTN4Q9NQC3 1192 aaKnown RBP13.28□□□□□ -0.28
APP-213ENST00000464867 SPG7Q9UQ90 795 aa13.28□□□□□ -0.28
APP-213ENST00000464867 TMEM88BA6NKF7 163 aa13.27□□□□□ -0.29
APP-213ENST00000464867 POTECB2RU33 542 aa13.27□□□□□ -0.29
APP-213ENST00000464867 RPS6KA4O75676 772 aa13.27□□□□□ -0.29
APP-213ENST00000464867 BEGAINQ9BUH8 593 aa13.27□□□□□ -0.29
APP-213ENST00000464867 ROCK2O75116 1388 aaKnown RBP13.27□□□□□ -0.29
APP-213ENST00000464867 VIRMAQ69YN4 1812 aaKnown RBP13.27□□□□□ -0.29
APP-213ENST00000464867 FBLN1P23142 703 aa13.26□□□□□ -0.29
APP-213ENST00000464867 PPP1R15BQ5SWA1 713 aa13.26□□□□□ -0.29
APP-213ENST00000464867 POTEEQ6S8J3 1075 aa13.26□□□□□ -0.29
APP-213ENST00000464867 A0A1W2PP64 1363 aa13.25□□□□□ -0.29
APP-213ENST00000464867 ATG3Q9NT62 314 aa13.25□□□□□ -0.29
APP-213ENST00000464867 CNTNAP4Q9C0A0 1308 aa13.24□□□□□ -0.29
APP-213ENST00000464867 RRS1Q15050 365 aaKnown RBP13.24□□□□□ -0.29
APP-213ENST00000464867 DEFB115Q30KQ5 88 aa13.24□□□□□ -0.29
APP-213ENST00000464867 ERFEQ4G0M1 354 aa13.24□□□□□ -0.29
APP-213ENST00000464867 AMER1Q5JTC6 1135 aaPredicted RBP13.24□□□□□ -0.29
APP-213ENST00000464867 TTLL6Q8N841 843 aa13.24□□□□□ -0.29
APP-213ENST00000464867 PASKQ96RG2 1323 aa13.23□□□□□ -0.29
APP-213ENST00000464867 IQCA1LA6NCM1 817 aa13.23□□□□□ -0.29
APP-213ENST00000464867 PDE4AP27815 886 aa13.23□□□□□ -0.29
APP-213ENST00000464867 LDHDQ86WU2 507 aa13.23□□□□□ -0.29
APP-213ENST00000464867 OXER1Q8TDS5 423 aa13.23□□□□□ -0.29
APP-213ENST00000464867 DDR1Q08345 913 aa13.22□□□□□ -0.29
APP-213ENST00000464867 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.29
APP-213ENST00000464867 INSRP06213 1382 aa13.21□□□□□ -0.29
APP-213ENST00000464867 DICER1Q9UPY3 1922 aaKnown RBP13.21□□□□□ -0.29
APP-213ENST00000464867 WDR33Q9C0J8 1336 aaKnown RBP13.21□□□□□ -0.29
APP-213ENST00000464867 HSP90AB2PQ58FF8 381 aa13.21□□□□□ -0.29
APP-213ENST00000464867 IFNL2Q8IZJ0 200 aa13.21□□□□□ -0.29
APP-213ENST00000464867 LARP6Q9BRS8 491 aaKnown RBP13.21□□□□□ -0.29
APP-213ENST00000464867 ANKRD13DQ6ZTN6 518 aa13.2□□□□□ -0.3
APP-213ENST00000464867 SRP68Q9UHB9 627 aaKnown RBP13.2□□□□□ -0.3
APP-213ENST00000464867 TNRC18O15417 2968 aaPredicted RBP13.2□□□□□ -0.3
APP-213ENST00000464867 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
APP-213ENST00000464867 USP42Q9H9J4 1324 aaKnown RBP13.19□□□□□ -0.3
APP-213ENST00000464867 RASSF10A6NK89 507 aa13.19□□□□□ -0.3
APP-213ENST00000464867 H0YIN7 160 aa13.19□□□□□ -0.3
APP-213ENST00000464867 NFKBIEO00221 500 aa13.19□□□□□ -0.3
APP-213ENST00000464867 POLRMTO00411 1230 aaKnown RBP13.19□□□□□ -0.3
APP-213ENST00000464867 ZPR1O75312 459 aa13.19□□□□□ -0.3
APP-213ENST00000464867 LSM11P83369 360 aaKnown RBP eCLIP13.19□□□□□ -0.39e-8■□□□□ 8.2
APP-213ENST00000464867 ABT1Q9ULW3 272 aaKnown RBP13.19□□□□□ -0.3
APP-213ENST00000464867 KDRP35968 1356 aa13.19□□□□□ -0.3
APP-213ENST00000464867 TBC1D12O60347 775 aa13.18□□□□□ -0.3
APP-213ENST00000464867 DDNO94850 711 aaPredicted RBP13.18□□□□□ -0.3
APP-213ENST00000464867 C2CD5Q86YS7 1000 aa13.18□□□□□ -0.3
APP-213ENST00000464867 BBXQ8WY36 941 aaPredicted RBP13.18□□□□□ -0.3
APP-213ENST00000464867 L3MBTL2Q969R5 705 aa13.18□□□□□ -0.3
APP-213ENST00000464867 PUS7Q96PZ0 661 aaKnown RBP13.18□□□□□ -0.3
APP-213ENST00000464867 FLT4P35916 1363 aa13.18□□□□□ -0.3
APP-213ENST00000464867 MYH14Q7Z406 1995 aaKnown RBP13.18□□□□□ -0.3
APP-213ENST00000464867 DLEC1Q9Y238 1755 aa13.17□□□□□ -0.3
APP-213ENST00000464867 ITGBL1O95965 494 aaPredicted RBP13.17□□□□□ -0.3
APP-213ENST00000464867 PHKG2P15735 406 aa13.17□□□□□ -0.3
APP-213ENST00000464867 TM4SF1P30408 202 aa13.17□□□□□ -0.3
APP-213ENST00000464867 EAPPQ56P03 285 aaPredicted RBP13.17□□□□□ -0.3
APP-213ENST00000464867 PAXIP1Q6ZW49 1069 aaPredicted RBP13.17□□□□□ -0.3
APP-213ENST00000464867 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
APP-213ENST00000464867 SCN4AP35499 1836 aa13.17□□□□□ -0.3
APP-213ENST00000464867 KIF24Q5T7B8 1368 aa13.17□□□□□ -0.3
APP-213ENST00000464867 ERVV-2B6SEH9 535 aa13.16□□□□□ -0.3
APP-213ENST00000464867 PBX2P40425 430 aa13.16□□□□□ -0.3
APP-213ENST00000464867 ECE1P42892 770 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms