RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 GOLGB1Q14789 3259 aaKnown RBP17.47■□□□□ 0.39
COMMD3-205ENST00000463688 NBPF26B4DH59 902 aa17.47■□□□□ 0.39
COMMD3-205ENST00000463688 PARP10Q53GL7 1025 aa17.47■□□□□ 0.39
COMMD3-205ENST00000463688 STYK1Q6J9G0 422 aa17.47■□□□□ 0.39
COMMD3-205ENST00000463688 PRR5LQ6MZQ0 368 aa17.47■□□□□ 0.39
COMMD3-205ENST00000463688 NBPF10Q6P3W6 841 aaKnown RBP17.47■□□□□ 0.39
COMMD3-205ENST00000463688 NGEFQ8N5V2 710 aa17.47■□□□□ 0.39
COMMD3-205ENST00000463688 NBPF15Q8N660 670 aa17.47■□□□□ 0.39
COMMD3-205ENST00000463688 KIF13BQ9NQT8 1826 aa17.46■□□□□ 0.39
COMMD3-205ENST00000463688 CHRNA5P30532 468 aa17.46■□□□□ 0.39
COMMD3-205ENST00000463688 ZNF622Q969S3 477 aaKnown RBP eCLIP17.46■□□□□ 0.39
COMMD3-205ENST00000463688 MASTLQ96GX5 879 aa17.46■□□□□ 0.39
COMMD3-205ENST00000463688 IFT57Q9NWB7 429 aa17.46■□□□□ 0.39
COMMD3-205ENST00000463688 LAS1LQ9Y4W2 734 aaKnown RBP17.46■□□□□ 0.39
COMMD3-205ENST00000463688 PRAMEF22A3QJZ6 481 aa17.45■□□□□ 0.38
COMMD3-205ENST00000463688 EIF2S2P20042 333 aaKnown RBP17.45■□□□□ 0.38
COMMD3-205ENST00000463688 ALDH1B1P30837 517 aa17.45■□□□□ 0.38
COMMD3-205ENST00000463688 PPP1R42Q7Z4L9 355 aa17.45■□□□□ 0.38
COMMD3-205ENST00000463688 RNF123Q5XPI4 1314 aa17.44■□□□□ 0.38
COMMD3-205ENST00000463688 MYL6BP14649 208 aa17.44■□□□□ 0.38
COMMD3-205ENST00000463688 GRIPAP1Q4V328 841 aa17.44■□□□□ 0.38
COMMD3-205ENST00000463688 TMX4Q9H1E5 349 aaPredicted RBP17.44■□□□□ 0.38
COMMD3-205ENST00000463688 WWC3Q9ULE0 1092 aa17.44■□□□□ 0.38
COMMD3-205ENST00000463688 TRIM35Q9UPQ4 493 aa17.44■□□□□ 0.38
COMMD3-205ENST00000463688 APAF1O14727 1248 aa17.43■□□□□ 0.38
COMMD3-205ENST00000463688 NPR1P16066 1061 aa17.43■□□□□ 0.38
COMMD3-205ENST00000463688 CCDC27Q2M243 656 aa17.43■□□□□ 0.38
COMMD3-205ENST00000463688 DDX21Q9NR30 783 aaKnown RBP eCLIP17.43■□□□□ 0.38
COMMD3-205ENST00000463688 DBF4Q9UBU7 674 aaPredicted RBP17.43■□□□□ 0.38
COMMD3-205ENST00000463688 KDM2BQ8NHM5 1336 aa17.43■□□□□ 0.38
COMMD3-205ENST00000463688 IBTKQ9P2D0 1353 aaPredicted RBP17.42■□□□□ 0.38
COMMD3-205ENST00000463688 HSP90B1P14625 803 aaKnown RBP17.42■□□□□ 0.38
COMMD3-205ENST00000463688 LMNB1P20700 586 aa17.42■□□□□ 0.38
COMMD3-205ENST00000463688 GIGYF2Q6Y7W6 1299 aaKnown RBP17.42■□□□□ 0.38
COMMD3-205ENST00000463688 MRS2Q9HD23 443 aa17.42■□□□□ 0.38
COMMD3-205ENST00000463688 HYPKQ9NX55 129 aa17.42■□□□□ 0.38
COMMD3-205ENST00000463688 ATP10DQ9P241 1426 aa17.42■□□□□ 0.38
COMMD3-205ENST00000463688 SRGNP10124 158 aa17.41■□□□□ 0.38
COMMD3-205ENST00000463688 MAPK8IP2Q13387 824 aaPredicted RBP17.41■□□□□ 0.38
COMMD3-205ENST00000463688 HDGFL1Q5TGJ6 251 aa17.41■□□□□ 0.38
COMMD3-205ENST00000463688 ADCY9O60503 1353 aa17.41■□□□□ 0.38
COMMD3-205ENST00000463688 KLRG2A4D1S0 409 aaPredicted RBP17.4■□□□□ 0.38
COMMD3-205ENST00000463688 PIP4K2AP48426 406 aaPredicted RBP17.4■□□□□ 0.38
COMMD3-205ENST00000463688 C1QTNF8P60827 252 aa17.4■□□□□ 0.38
COMMD3-205ENST00000463688 C9orf131Q5VYM1 1079 aa17.4■□□□□ 0.38
COMMD3-205ENST00000463688 CC2D2BQ6DHV5 1058 aa17.4■□□□□ 0.38
COMMD3-205ENST00000463688 RTKN2Q8IZC4 609 aa17.38■□□□□ 0.37
COMMD3-205ENST00000463688 RNF181Q9P0P0 153 aa17.38■□□□□ 0.37
COMMD3-205ENST00000463688 SCN7AQ01118 1682 aa17.38■□□□□ 0.37
COMMD3-205ENST00000463688 HLFQ16534 295 aa17.38■□□□□ 0.37
COMMD3-205ENST00000463688 DPY19L2Q6NUT2 758 aa17.38■□□□□ 0.37
COMMD3-205ENST00000463688 C16orf71Q8IYS4 520 aaPredicted RBP17.38■□□□□ 0.37
COMMD3-205ENST00000463688 UTP14AQ9BVJ6 771 aaKnown RBP17.38■□□□□ 0.37
COMMD3-205ENST00000463688 ZBTB3Q9H5J0 574 aa17.38■□□□□ 0.37
COMMD3-205ENST00000463688 IL16Q14005 1332 aa17.37■□□□□ 0.37
COMMD3-205ENST00000463688 NRXN2Q9P2S2 1712 aa17.37■□□□□ 0.37
COMMD3-205ENST00000463688 ZNF853P0CG23 659 aa17.37■□□□□ 0.37
COMMD3-205ENST00000463688 CCDC30Q5VVM6 783 aa17.37■□□□□ 0.37
COMMD3-205ENST00000463688 DUSP27Q5VZP5 1158 aa17.37■□□□□ 0.37
COMMD3-205ENST00000463688 RPGRQ92834 1020 aaKnown RBP17.37■□□□□ 0.37
COMMD3-205ENST00000463688 NLRP3Q96P20 1036 aa17.37■□□□□ 0.37
COMMD3-205ENST00000463688 LTBP3Q9NS15 1303 aa17.37■□□□□ 0.37
COMMD3-205ENST00000463688 KDM3BQ7LBC6 1761 aa17.36■□□□□ 0.37
COMMD3-205ENST00000463688 DDX58O95786 925 aaKnown RBP17.36■□□□□ 0.37
COMMD3-205ENST00000463688 CCDC93Q567U6 631 aa17.36■□□□□ 0.37
COMMD3-205ENST00000463688 TTLL7Q6ZT98 887 aa17.36■□□□□ 0.37
COMMD3-205ENST00000463688 COPS6Q7L5N1 327 aa17.36■□□□□ 0.37
COMMD3-205ENST00000463688 ZNF34Q8IZ26 560 aa17.36■□□□□ 0.37
COMMD3-205ENST00000463688 TAOK3Q9H2K8 898 aa17.36■□□□□ 0.37
COMMD3-205ENST00000463688 MBIPQ9NS73 344 aa17.36■□□□□ 0.37
COMMD3-205ENST00000463688 DLG5Q8TDM6 1919 aa17.35■□□□□ 0.37
COMMD3-205ENST00000463688 GOLGA2Q08379 1002 aa17.35■□□□□ 0.37
COMMD3-205ENST00000463688 PDIA6Q15084 440 aa17.35■□□□□ 0.37
COMMD3-205ENST00000463688 PRPF40BQ6NWY9 871 aaKnown RBP17.35■□□□□ 0.37
COMMD3-205ENST00000463688 ANKRD13DQ6ZTN6 518 aa17.35■□□□□ 0.37
COMMD3-205ENST00000463688 PLBD2Q8NHP8 589 aa17.35■□□□□ 0.37
COMMD3-205ENST00000463688 RBM17Q96I25 401 aaKnown RBP17.35■□□□□ 0.37
COMMD3-205ENST00000463688 LAMB4A4D0S4 1761 aa17.34■□□□□ 0.37
COMMD3-205ENST00000463688 C21orf2O43822 256 aa17.34■□□□□ 0.37
COMMD3-205ENST00000463688 TCIRG1Q13488 830 aa17.34■□□□□ 0.37
COMMD3-205ENST00000463688 RIC1Q4ADV7 1423 aa17.34■□□□□ 0.37
COMMD3-205ENST00000463688 XAGE3Q8WTP9 111 aa17.34■□□□□ 0.37
COMMD3-205ENST00000463688 FAM177BA6PVY3 158 aa17.33■□□□□ 0.36
COMMD3-205ENST00000463688 GPTP24298 496 aa17.33■□□□□ 0.36
COMMD3-205ENST00000463688 AIMP1Q12904 312 aaKnown RBP17.33■□□□□ 0.36
COMMD3-205ENST00000463688 CRY2Q49AN0 593 aa17.33■□□□□ 0.36
COMMD3-205ENST00000463688 WDR63Q8IWG1 891 aa17.33■□□□□ 0.36
COMMD3-205ENST00000463688 ZNF526Q8TF50 670 aaPredicted RBP17.33■□□□□ 0.36
COMMD3-205ENST00000463688 STK31Q9BXU1 1019 aa17.33■□□□□ 0.36
COMMD3-205ENST00000463688 TOMM70O94826 608 aa17.32■□□□□ 0.36
COMMD3-205ENST00000463688 HOXA10P31260 410 aaPredicted RBP17.32■□□□□ 0.36
COMMD3-205ENST00000463688 SLC10A5Q5PT55 438 aa17.32■□□□□ 0.36
COMMD3-205ENST00000463688 CHPF2Q9P2E5 772 aa17.32■□□□□ 0.36
COMMD3-205ENST00000463688 N4BP2Q86UW6 1770 aaPredicted RBP17.32■□□□□ 0.36
COMMD3-205ENST00000463688 TMC4Q7Z404 712 aa17.31■□□□□ 0.36
COMMD3-205ENST00000463688 LRP10Q7Z4F1 713 aa17.31■□□□□ 0.36
COMMD3-205ENST00000463688 WWC1Q8IX03 1113 aa17.31■□□□□ 0.36
COMMD3-205ENST00000463688 CRAMP1Q96RY5 1269 aa17.31■□□□□ 0.36
COMMD3-205ENST00000463688 ARFGEF1Q9Y6D6 1849 aa17.31■□□□□ 0.36
COMMD3-205ENST00000463688 SH3TC1Q8TE82 1336 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms