RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 FCHSD2O94868 740 aa10.59□□□□□ -0.71
SHQ1-203ENST00000463369 TCF3P15923 654 aa10.59□□□□□ -0.71
SHQ1-203ENST00000463369 FOSBP53539 338 aa10.59□□□□□ -0.71
SHQ1-203ENST00000463369 HDAC1Q13547 482 aaPredicted RBP10.59□□□□□ -0.71
SHQ1-203ENST00000463369 KIF2CQ99661 725 aa10.59□□□□□ -0.71
SHQ1-203ENST00000463369 GTPBP4Q9BZE4 634 aaKnown RBP10.59□□□□□ -0.71
SHQ1-203ENST00000463369 RBSNQ9H1K0 784 aa10.59□□□□□ -0.71
SHQ1-203ENST00000463369 AXIN2Q9Y2T1 843 aa10.59□□□□□ -0.71
SHQ1-203ENST00000463369 ZNF330Q9Y3S2 320 aaPredicted RBP10.59□□□□□ -0.71
SHQ1-203ENST00000463369 ZSCAN23Q3MJ62 389 aa10.59□□□□□ -0.71
SHQ1-203ENST00000463369 NWD2Q9ULI1 1742 aa10.58□□□□□ -0.72
SHQ1-203ENST00000463369 K7ELQ4 463 aaPredicted RBP10.58□□□□□ -0.72
SHQ1-203ENST00000463369 KIF20AO95235 890 aa10.58□□□□□ -0.72
SHQ1-203ENST00000463369 RUNDC1Q96C34 613 aa10.58□□□□□ -0.72
SHQ1-203ENST00000463369 JCADQ9P266 1359 aa10.58□□□□□ -0.72
SHQ1-203ENST00000463369 IGSF1Q8N6C5 1336 aa10.58□□□□□ -0.72
SHQ1-203ENST00000463369 CHRNA2Q15822 529 aa10.57□□□□□ -0.72
SHQ1-203ENST00000463369 TSR1Q2NL82 804 aaKnown RBP10.57□□□□□ -0.72
SHQ1-203ENST00000463369 PLEKHF1Q96S99 279 aa10.57□□□□□ -0.72
SHQ1-203ENST00000463369 EYA1Q99502 592 aa10.57□□□□□ -0.72
SHQ1-203ENST00000463369 PRDM11Q9NQV5 511 aa10.57□□□□□ -0.72
SHQ1-203ENST00000463369 CCDC39Q9UFE4 941 aa10.57□□□□□ -0.72
SHQ1-203ENST00000463369 KDRP35968 1356 aa10.57□□□□□ -0.72
SHQ1-203ENST00000463369 CD2BP2O95400 341 aaKnown RBP10.57□□□□□ -0.72
SHQ1-203ENST00000463369 MLLT3P42568 568 aaPredicted RBP10.57□□□□□ -0.72
SHQ1-203ENST00000463369 C1QBPQ07021 282 aaKnown RBP10.57□□□□□ -0.72
SHQ1-203ENST00000463369 WDR63Q8IWG1 891 aa10.57□□□□□ -0.72
SHQ1-203ENST00000463369 GPATCH11Q8N954 259 aa10.57□□□□□ -0.72
SHQ1-203ENST00000463369 LTV1Q96GA3 475 aaPredicted RBP10.57□□□□□ -0.72
SHQ1-203ENST00000463369 BCL2L13Q9BXK5 485 aa10.57□□□□□ -0.72
SHQ1-203ENST00000463369 FAM83GA6ND36 823 aa10.56□□□□□ -0.72
SHQ1-203ENST00000463369 HMOX1P09601 288 aa10.56□□□□□ -0.72
SHQ1-203ENST00000463369 PPP4R3BQ5MIZ7 849 aa10.56□□□□□ -0.72
SHQ1-203ENST00000463369 GORABQ5T7V8 394 aa10.56□□□□□ -0.72
SHQ1-203ENST00000463369 CAVIN1Q6NZI2 390 aaKnown RBP10.56□□□□□ -0.72
SHQ1-203ENST00000463369 MYRIPQ8NFW9 859 aa10.56□□□□□ -0.72
SHQ1-203ENST00000463369 ANKRD24Q8TF21 1146 aa10.56□□□□□ -0.72
SHQ1-203ENST00000463369 PCMTD1Q96MG8 357 aaPredicted RBP10.56□□□□□ -0.72
SHQ1-203ENST00000463369 ERBB3P21860 1342 aa10.56□□□□□ -0.72
SHQ1-203ENST00000463369 NRAPQ86VF7 1730 aa10.56□□□□□ -0.72
SHQ1-203ENST00000463369 HSPA1LP34931 641 aa10.56□□□□□ -0.72
SHQ1-203ENST00000463369 PRIM1P49642 420 aaKnown RBP10.56□□□□□ -0.72
SHQ1-203ENST00000463369 FOXD4L6Q3SYB3 417 aaPredicted RBP10.56□□□□□ -0.72
SHQ1-203ENST00000463369 ZKSCAN2Q63HK3 967 aa10.56□□□□□ -0.72
SHQ1-203ENST00000463369 SULT6B1Q6IMI4 303 aa10.56□□□□□ -0.72
SHQ1-203ENST00000463369 FOXD4L3Q6VB84 417 aaPredicted RBP10.56□□□□□ -0.72
SHQ1-203ENST00000463369 LMBRD1Q9NUN5 540 aa10.56□□□□□ -0.72
SHQ1-203ENST00000463369 NCAPD2Q15021 1401 aa10.56□□□□□ -0.72
SHQ1-203ENST00000463369 LETM1O95202 739 aaPredicted RBP10.55□□□□□ -0.72
SHQ1-203ENST00000463369 GTF2E1P29083 439 aaPredicted RBP10.55□□□□□ -0.72
SHQ1-203ENST00000463369 NBPF6Q5VWK0 638 aa10.55□□□□□ -0.72
SHQ1-203ENST00000463369 SPTY2D1Q68D10 685 aaPredicted RBP10.55□□□□□ -0.72
SHQ1-203ENST00000463369 DZIP1LQ8IYY4 767 aaKnown RBP10.55□□□□□ -0.72
SHQ1-203ENST00000463369 TMTC2Q8N394 836 aa10.55□□□□□ -0.72
SHQ1-203ENST00000463369 GAS2L2Q8NHY3 880 aa10.55□□□□□ -0.72
SHQ1-203ENST00000463369 NBPF4Q96M43 638 aa10.55□□□□□ -0.72
SHQ1-203ENST00000463369 C8orf37Q96NL8 207 aa10.55□□□□□ -0.72
SHQ1-203ENST00000463369 COL5A2P05997 1499 aaPredicted RBP10.55□□□□□ -0.72
SHQ1-203ENST00000463369 PRKAR2BP31323 418 aa10.54□□□□□ -0.72
SHQ1-203ENST00000463369 UBXN4Q92575 508 aa10.54□□□□□ -0.72
SHQ1-203ENST00000463369 MCTP1Q6DN14 999 aa10.54□□□□□ -0.72
SHQ1-203ENST00000463369 FAM43BQ6ZT52 329 aaPredicted RBP10.54□□□□□ -0.72
SHQ1-203ENST00000463369 FTSJ3Q8IY81 847 aaKnown RBP10.54□□□□□ -0.72
SHQ1-203ENST00000463369 TCP11L2Q8N4U5 519 aa10.54□□□□□ -0.72
SHQ1-203ENST00000463369 DNAJC2Q99543 621 aaKnown RBP10.54□□□□□ -0.72
SHQ1-203ENST00000463369 SPATA31A6Q5VVP1 1343 aa10.54□□□□□ -0.72
SHQ1-203ENST00000463369 WNK3Q9BYP7 1800 aa10.53□□□□□ -0.72
SHQ1-203ENST00000463369 PARP4Q9UKK3 1724 aaKnown RBP10.53□□□□□ -0.72
SHQ1-203ENST00000463369 GTF2F1P35269 517 aaKnown RBP eCLIP10.53□□□□□ -0.72
SHQ1-203ENST00000463369 NUCB2P80303 420 aa10.53□□□□□ -0.72
SHQ1-203ENST00000463369 CBX1P83916 185 aa10.53□□□□□ -0.72
SHQ1-203ENST00000463369 NUCB1Q02818 461 aa10.53□□□□□ -0.72
SHQ1-203ENST00000463369 ZNF710Q8N1W2 664 aa10.53□□□□□ -0.72
SHQ1-203ENST00000463369 PHACTR3Q96KR7 559 aa10.53□□□□□ -0.72
SHQ1-203ENST00000463369 PRIMPOLQ96LW4 560 aa10.53□□□□□ -0.72
SHQ1-203ENST00000463369 USTQ9Y2C2 406 aa10.53□□□□□ -0.72
SHQ1-203ENST00000463369 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.52□□□□□ -0.72
SHQ1-203ENST00000463369 AK9Q5TCS8 1911 aa10.52□□□□□ -0.73
SHQ1-203ENST00000463369 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.52□□□□□ -0.73
SHQ1-203ENST00000463369 NUTM2BA6NNL0 878 aaPredicted RBP10.52□□□□□ -0.73
SHQ1-203ENST00000463369 NUTM2EB1AL46 878 aaPredicted RBP10.52□□□□□ -0.73
SHQ1-203ENST00000463369 CYP2E1P05181 493 aaPredicted RBP10.52□□□□□ -0.73
SHQ1-203ENST00000463369 TMPOP42166 694 aaKnown RBP10.52□□□□□ -0.73
SHQ1-203ENST00000463369 BMP2KLQ5H9B9 411 aa10.52□□□□□ -0.73
SHQ1-203ENST00000463369 LRSAM1Q6UWE0 723 aa10.52□□□□□ -0.73
SHQ1-203ENST00000463369 NUTM2AQ8IVF1 878 aaPredicted RBP10.52□□□□□ -0.73
SHQ1-203ENST00000463369 RBM42Q9BTD8 480 aaKnown RBP10.52□□□□□ -0.73
SHQ1-203ENST00000463369 DDX19BQ9UMR2 479 aa10.52□□□□□ -0.73
SHQ1-203ENST00000463369 RRP7AQ9Y3A4 280 aaKnown RBP10.52□□□□□ -0.73
SHQ1-203ENST00000463369 WDR17Q8IZU2 1322 aa10.52□□□□□ -0.73
SHQ1-203ENST00000463369 PKD1L3Q7Z443 1732 aa10.52□□□□□ -0.73
SHQ1-203ENST00000463369 ADAMTS2O95450 1211 aa10.51□□□□□ -0.73
SHQ1-203ENST00000463369 HMGN5P82970 282 aaKnown RBP10.51□□□□□ -0.73
SHQ1-203ENST00000463369 CACNB1Q02641 598 aaPredicted RBP10.51□□□□□ -0.73
SHQ1-203ENST00000463369 KIAA2012Q0VF49 1180 aa10.51□□□□□ -0.73
SHQ1-203ENST00000463369 APBB1IPQ7Z5R6 666 aaPredicted RBP10.51□□□□□ -0.73
SHQ1-203ENST00000463369 USHBP1Q8N6Y0 703 aa10.51□□□□□ -0.73
SHQ1-203ENST00000463369 BTG4Q9NY30 223 aa10.51□□□□□ -0.73
SHQ1-203ENST00000463369 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.51□□□□□ -0.734e-6■■■■■ 27.4
SHQ1-203ENST00000463369 KIF16BQ96L93 1317 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms