RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 EIF4A2Q14240 407 aaKnown RBP13.65□□□□□ -0.22
SMARCAD1-204ENST00000457823 TCEANC2Q96MN5 208 aa13.65□□□□□ -0.22
SMARCAD1-204ENST00000457823 PANK2Q9BZ23 570 aa13.65□□□□□ -0.22
SMARCAD1-204ENST00000457823 C6orf229H3BNL8 230 aa13.64□□□□□ -0.23
SMARCAD1-204ENST00000457823 MICU3Q86XE3 530 aa13.64□□□□□ -0.23
SMARCAD1-204ENST00000457823 CCDC144CPQ8IYA2 1237 aa13.64□□□□□ -0.23
SMARCAD1-204ENST00000457823 TXLNBQ8N3L3 684 aa13.64□□□□□ -0.23
SMARCAD1-204ENST00000457823 UBXN4Q92575 508 aa13.64□□□□□ -0.23
SMARCAD1-204ENST00000457823 PLEKHH1Q9ULM0 1364 aa13.64□□□□□ -0.23
SMARCAD1-204ENST00000457823 ERLIN1O75477 346 aa13.64□□□□□ -0.23
SMARCAD1-204ENST00000457823 IARSP41252 1262 aaKnown RBP13.64□□□□□ -0.23
SMARCAD1-204ENST00000457823 ERLIN2O94905 339 aa13.64□□□□□ -0.23
SMARCAD1-204ENST00000457823 TNRQ92752 1358 aa13.64□□□□□ -0.23
SMARCAD1-204ENST00000457823 BIN1O00499 593 aa13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 SSRP1Q08945 709 aaKnown RBP13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 KIAA1328Q86T90 577 aa13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 C16orf71Q8IYS4 520 aaPredicted RBP13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 PAF1Q8N7H5 531 aa13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 CCDC194A0A1B0GVG4 234 aa13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 CNNM3Q8NE01 707 aa13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 BRF1Q92994 677 aa13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 TMX3Q96JJ7 454 aa13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 CWC15Q9P013 229 aaKnown RBP13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 NLRP5P59047 1200 aa13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 PTPN14Q15678 1187 aa13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 TMEM67Q5HYA8 995 aa13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 TSPYL6Q8N831 410 aa13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 CDC5LQ99459 802 aaKnown RBP13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 TSPYL1Q9H0U9 437 aa13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 KRT24Q2M2I5 525 aa13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 MRPL50Q8N5N7 158 aaKnown RBP13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 DDX19AQ9NUU7 478 aaKnown RBP13.63□□□□□ -0.23
SMARCAD1-204ENST00000457823 TTC21AQ8NDW8 1320 aa13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 RLBP1P12271 317 aa13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 LMBR1LQ6UX01 489 aa13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 CATIPQ7Z7H3 387 aa13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 NECAB1Q8N987 351 aa13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 RPGRQ92834 1020 aaKnown RBP13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 CARD14Q9BXL6 1004 aa13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 PLCH2O75038 1416 aa13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 NEFHP12036 1026 aa13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 TTF1Q15361 905 aaPredicted RBP13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 CENPHQ9H3R5 247 aa13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 ZNF219Q9P2Y4 722 aaPredicted RBP13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 CTAGE5O15320 804 aa13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 CCDC96Q2M329 555 aa13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 TOP1P11387 765 aaKnown RBP13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 MTHFSDQ2M296 383 aaKnown RBP13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 LEKR1Q6ZMV7 388 aa13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 PHACTR3Q96KR7 559 aa13.62□□□□□ -0.23
SMARCAD1-204ENST00000457823 GOLGA6L10A6NI86 522 aa13.61□□□□□ -0.23
SMARCAD1-204ENST00000457823 GRM8O00222 908 aa13.61□□□□□ -0.23
SMARCAD1-204ENST00000457823 VAMP4O75379 141 aa13.61□□□□□ -0.23
SMARCAD1-204ENST00000457823 ATP8B2P98198 1209 aa13.61□□□□□ -0.23
SMARCAD1-204ENST00000457823 CLIP2Q9UDT6 1046 aa13.61□□□□□ -0.23
SMARCAD1-204ENST00000457823 HMGB2P26583 209 aaKnown RBP13.61□□□□□ -0.23
SMARCAD1-204ENST00000457823 LRRC2Q9BYS8 371 aa13.61□□□□□ -0.23
SMARCAD1-204ENST00000457823 CCDC66A2RUB6 948 aa13.61□□□□□ -0.23
SMARCAD1-204ENST00000457823 ZNF165P49910 485 aa13.61□□□□□ -0.23
SMARCAD1-204ENST00000457823 ZCRB1Q8TBF4 217 aaKnown RBP13.61□□□□□ -0.23
SMARCAD1-204ENST00000457823 PHAXQ9H814 394 aaKnown RBP13.61□□□□□ -0.23
SMARCAD1-204ENST00000457823 HMG20BQ9P0W2 317 aa13.61□□□□□ -0.23
SMARCAD1-204ENST00000457823 PARD3Q8TEW0 1356 aa13.61□□□□□ -0.23
SMARCAD1-204ENST00000457823 KSR2Q6VAB6 950 aa13.6□□□□□ -0.23
SMARCAD1-204ENST00000457823 MFSD6Q6ZSS7 791 aa13.6□□□□□ -0.23
SMARCAD1-204ENST00000457823 NCOA7Q8NI08 942 aa13.6□□□□□ -0.23
SMARCAD1-204ENST00000457823 CPLX3Q8WVH0 158 aa13.6□□□□□ -0.23
SMARCAD1-204ENST00000457823 RBM27Q9P2N5 1060 aaKnown RBP13.6□□□□□ -0.23
SMARCAD1-204ENST00000457823 RALGAPBQ86X10 1494 aa13.6□□□□□ -0.23
SMARCAD1-204ENST00000457823 PRAG1Q86YV5 1406 aa13.6□□□□□ -0.23
SMARCAD1-204ENST00000457823 LRRC59Q96AG4 307 aaKnown RBP13.6□□□□□ -0.23
SMARCAD1-204ENST00000457823 KAT6BQ8WYB5 2073 aa13.6□□□□□ -0.23
SMARCAD1-204ENST00000457823 TSPY2A6NKD2 308 aa13.6□□□□□ -0.23
SMARCAD1-204ENST00000457823 ZNF397Q8NF99 534 aaPredicted RBP13.6□□□□□ -0.23
SMARCAD1-204ENST00000457823 VAT1LQ9HCJ6 419 aa13.6□□□□□ -0.23
SMARCAD1-204ENST00000457823 ALDH1L1O75891 902 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 FAM193AP78312 1265 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 RAB34Q9BZG1 259 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 IQSEC3Q9UPP2 1182 aaPredicted RBP13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 PA2G4Q9UQ80 394 aaKnown RBP13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 URI1O94763 535 aaPredicted RBP13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 LDHCP07864 332 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 METAP2P50579 478 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 ESYT1Q9BSJ8 1104 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 TRMT1Q9NXH9 659 aaKnown RBP13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 ASXL1Q8IXJ9 1541 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 POLR3AO14802 1390 aaPredicted RBP13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 PPIP5K1Q6PFW1 1433 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 PPP1R12BO60237 982 aaPredicted RBP13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 EIF3JO75822 258 aaKnown RBP13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 KLHL40Q2TBA0 621 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 ISM2Q6H9L7 571 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 KIF18AQ8NI77 898 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 TAF4BQ92750 862 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 UBA5Q9GZZ9 404 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 RBM8AQ9Y5S9 174 aaKnown RBP13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 SLC4A8Q2Y0W8 1093 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 AKAP4Q5JQC9 854 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 CABLES1Q8TDN4 633 aa13.59□□□□□ -0.23
SMARCAD1-204ENST00000457823 MAPKBP1O60336 1514 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms