RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 WDR33Q9C0J8 1336 aaKnown RBP12.57□□□□□ -0.4
LINC00342-202ENST00000448494 EIF3JO75822 258 aaKnown RBP12.57□□□□□ -0.4
LINC00342-202ENST00000448494 RWDD2BP57060 319 aa12.57□□□□□ -0.4
LINC00342-202ENST00000448494 DDR1Q08345 913 aa12.57□□□□□ -0.4
LINC00342-202ENST00000448494 CCDC30Q5VVM6 783 aa12.57□□□□□ -0.4
LINC00342-202ENST00000448494 LRRC8AQ8IWT6 810 aa12.57□□□□□ -0.4
LINC00342-202ENST00000448494 CCAR2Q8N163 923 aaKnown RBP12.57□□□□□ -0.4
LINC00342-202ENST00000448494 DDX11Q96FC9 970 aa12.57□□□□□ -0.4
LINC00342-202ENST00000448494 NRBP1Q9UHY1 535 aa12.57□□□□□ -0.4
LINC00342-202ENST00000448494 USP27XA6NNY8 438 aa12.57□□□□□ -0.4
LINC00342-202ENST00000448494 CT47B1P0C2W7 299 aaPredicted RBP12.57□□□□□ -0.4
LINC00342-202ENST00000448494 TBC1D8BQ0IIM8 1120 aa12.57□□□□□ -0.4
LINC00342-202ENST00000448494 LRRIQ1Q96JM4 1722 aa12.57□□□□□ -0.4
LINC00342-202ENST00000448494 PPFIA4O75335 1185 aa12.56□□□□□ -0.4
LINC00342-202ENST00000448494 WWC2Q6AWC2 1192 aa12.56□□□□□ -0.4
LINC00342-202ENST00000448494 FOXR1Q6PIV2 292 aa12.56□□□□□ -0.4
LINC00342-202ENST00000448494 WDR63Q8IWG1 891 aa12.56□□□□□ -0.4
LINC00342-202ENST00000448494 MSL3Q8N5Y2 521 aaKnown RBP12.56□□□□□ -0.4
LINC00342-202ENST00000448494 CCDC26Q8TAB7 109 aa12.56□□□□□ -0.4
LINC00342-202ENST00000448494 GCC1Q96CN9 775 aa12.56□□□□□ -0.4
LINC00342-202ENST00000448494 DISP3Q9P2K9 1392 aa12.56□□□□□ -0.4
LINC00342-202ENST00000448494 KIAA0586Q9BVV6 1533 aa12.56□□□□□ -0.4
LINC00342-202ENST00000448494 CCDC96Q2M329 555 aa12.56□□□□□ -0.4
LINC00342-202ENST00000448494 GIMAP6Q6P9H5 292 aa12.56□□□□□ -0.4
LINC00342-202ENST00000448494 KCNV1Q6PIU1 500 aa12.56□□□□□ -0.4
LINC00342-202ENST00000448494 KLHL23Q8NBE8 558 aa12.56□□□□□ -0.4
LINC00342-202ENST00000448494 KAT2BQ92831 832 aa12.56□□□□□ -0.4
LINC00342-202ENST00000448494 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
LINC00342-202ENST00000448494 EFCAB8A8MWE9 144 aa12.55□□□□□ -0.4
LINC00342-202ENST00000448494 PAX7P23759 505 aa12.55□□□□□ -0.4
LINC00342-202ENST00000448494 GPTP24298 496 aa12.55□□□□□ -0.4
LINC00342-202ENST00000448494 RBM5P52756 815 aaKnown RBP eCLIP12.55□□□□□ -0.45e-10■■■■□ 19.6
LINC00342-202ENST00000448494 CWC27Q6UX04 472 aaKnown RBP12.55□□□□□ -0.4
LINC00342-202ENST00000448494 SLC24A3Q9HC58 644 aa12.55□□□□□ -0.4
LINC00342-202ENST00000448494 ZBTB40Q9NUA8 1239 aa12.55□□□□□ -0.4
LINC00342-202ENST00000448494 IRAK4Q9NWZ3 460 aa12.55□□□□□ -0.4
LINC00342-202ENST00000448494 ERBINQ96RT1 1412 aa12.55□□□□□ -0.4
LINC00342-202ENST00000448494 RPAP1Q9BWH6 1393 aaPredicted RBP12.55□□□□□ -0.4
LINC00342-202ENST00000448494 TRPM1Q7Z4N2 1603 aa12.55□□□□□ -0.4
LINC00342-202ENST00000448494 CAND2O75155 1236 aa12.55□□□□□ -0.4
LINC00342-202ENST00000448494 SEC31AO94979 1220 aaKnown RBP12.55□□□□□ -0.4
LINC00342-202ENST00000448494 MRPL12P52815 198 aaKnown RBP12.55□□□□□ -0.4
LINC00342-202ENST00000448494 CTCFLQ8NI51 663 aaPredicted RBP12.55□□□□□ -0.4
LINC00342-202ENST00000448494 ZNF483Q8TF39 744 aaPredicted RBP12.55□□□□□ -0.4
LINC00342-202ENST00000448494 TRIM5Q9C035 493 aa12.55□□□□□ -0.4
LINC00342-202ENST00000448494 GDPD2Q9HCC8 539 aa12.55□□□□□ -0.4
LINC00342-202ENST00000448494 ARFGAP3Q9NP61 516 aa12.55□□□□□ -0.4
LINC00342-202ENST00000448494 SPATS2LQ9NUQ6 558 aaKnown RBP12.55□□□□□ -0.4
LINC00342-202ENST00000448494 DAPK1P53355 1430 aa12.54□□□□□ -0.4
LINC00342-202ENST00000448494 NF2P35240 595 aa12.54□□□□□ -0.4
LINC00342-202ENST00000448494 FUT8Q9BYC5 575 aa12.54□□□□□ -0.4
LINC00342-202ENST00000448494 SKILP12757 684 aa12.54□□□□□ -0.4
LINC00342-202ENST00000448494 SCRN1Q12765 414 aa12.54□□□□□ -0.4
LINC00342-202ENST00000448494 C1QTNF12Q5T7M4 302 aa12.54□□□□□ -0.4
LINC00342-202ENST00000448494 LRRC31Q6UY01 552 aa12.54□□□□□ -0.4
LINC00342-202ENST00000448494 ARMC2Q8NEN0 867 aa12.54□□□□□ -0.4
LINC00342-202ENST00000448494 CCDC34Q96HJ3 373 aa12.54□□□□□ -0.4
LINC00342-202ENST00000448494 TESK2Q96S53 571 aa12.54□□□□□ -0.4
LINC00342-202ENST00000448494 CPSF2Q9P2I0 782 aaKnown RBP12.54□□□□□ -0.4
LINC00342-202ENST00000448494 KINO60870 393 aaKnown RBP12.53□□□□□ -0.4
LINC00342-202ENST00000448494 MYBL2P10244 700 aa12.53□□□□□ -0.4
LINC00342-202ENST00000448494 TMF1P82094 1093 aa12.53□□□□□ -0.4
LINC00342-202ENST00000448494 SNW1Q13573 536 aaKnown RBP12.53□□□□□ -0.4
LINC00342-202ENST00000448494 SETDB1Q15047 1291 aa12.53□□□□□ -0.4
LINC00342-202ENST00000448494 INTS3Q68E01 1043 aaKnown RBP12.53□□□□□ -0.4
LINC00342-202ENST00000448494 CPLX2Q6PUV4 134 aaKnown RBP12.53□□□□□ -0.4
LINC00342-202ENST00000448494 TDRD7Q8NHU6 1098 aaKnown RBP12.53□□□□□ -0.4
LINC00342-202ENST00000448494 N4BP2L2Q92802 583 aaPredicted RBP12.53□□□□□ -0.4
LINC00342-202ENST00000448494 JPH2Q9BR39 696 aaPredicted RBP12.53□□□□□ -0.4
LINC00342-202ENST00000448494 BCL2L13Q9BXK5 485 aa12.53□□□□□ -0.4
LINC00342-202ENST00000448494 ADGRL1O94910 1474 aa12.53□□□□□ -0.4
LINC00342-202ENST00000448494 PPRC1Q5VV67 1664 aaKnown RBP12.53□□□□□ -0.4
LINC00342-202ENST00000448494 SOS1Q07889 1333 aaPredicted RBP12.53□□□□□ -0.4
LINC00342-202ENST00000448494 H3BQF6 201 aa12.52□□□□□ -0.4
LINC00342-202ENST00000448494 TADA3O75528 432 aa12.52□□□□□ -0.4
LINC00342-202ENST00000448494 PREPLQ4J6C6 727 aaPredicted RBP12.52□□□□□ -0.4
LINC00342-202ENST00000448494 PLEKHO1Q53GL0 409 aaPredicted RBP12.52□□□□□ -0.4
LINC00342-202ENST00000448494 POTEDQ86YR6 584 aa12.52□□□□□ -0.4
LINC00342-202ENST00000448494 ITPRIPQ8IWB1 547 aa12.52□□□□□ -0.4
LINC00342-202ENST00000448494 GPR161Q8N6U8 529 aaKnown RBP12.52□□□□□ -0.4
LINC00342-202ENST00000448494 LRRN4CLQ8ND94 238 aa12.52□□□□□ -0.4
LINC00342-202ENST00000448494 PHF23Q9BUL5 403 aaPredicted RBP12.52□□□□□ -0.4
LINC00342-202ENST00000448494 ASXL1Q8IXJ9 1541 aa12.52□□□□□ -0.4
LINC00342-202ENST00000448494 PLEKHD1A6NEE1 506 aa12.52□□□□□ -0.41
LINC00342-202ENST00000448494 MAP2K7O14733 419 aa12.52□□□□□ -0.41
LINC00342-202ENST00000448494 RTN2O75298 545 aa12.52□□□□□ -0.41
LINC00342-202ENST00000448494 RBBP5Q15291 538 aaKnown RBP12.52□□□□□ -0.41
LINC00342-202ENST00000448494 PDCD2Q16342 344 aaPredicted RBP12.52□□□□□ -0.41
LINC00342-202ENST00000448494 SUDS3Q9H7L9 328 aaPredicted RBP12.52□□□□□ -0.41
LINC00342-202ENST00000448494 DNMT1P26358 1616 aaKnown RBP12.52□□□□□ -0.41
LINC00342-202ENST00000448494 SRGAP3O43295 1099 aa12.51□□□□□ -0.41
LINC00342-202ENST00000448494 RDXP35241 583 aaKnown RBP12.51□□□□□ -0.41
LINC00342-202ENST00000448494 CCDC144BQ3MJ40 725 aa12.51□□□□□ -0.41
LINC00342-202ENST00000448494 CCDC144CPQ8IYA2 1237 aa12.51□□□□□ -0.41
LINC00342-202ENST00000448494 MKL1Q969V6 931 aa12.51□□□□□ -0.41
LINC00342-202ENST00000448494 VPS18Q9P253 973 aa12.51□□□□□ -0.41
LINC00342-202ENST00000448494 PRDM15P57071 1507 aaPredicted RBP12.51□□□□□ -0.41
LINC00342-202ENST00000448494 MAGI2Q86UL8 1455 aa12.51□□□□□ -0.41
LINC00342-202ENST00000448494 ITSN2Q9NZM3 1697 aa12.51□□□□□ -0.41
LINC00342-202ENST00000448494 PRPF38AQ8NAV1 312 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms