RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-207ENST00000441725 ATP2B1P20020 1258 aa6.05□□□□□ -1.44
CDC42BPA-207ENST00000441725 ZAP70P43403 619 aa6.05□□□□□ -1.44
CDC42BPA-207ENST00000441725 DGKZQ13574 1117 aa6.05□□□□□ -1.44
CDC42BPA-207ENST00000441725 TLR1Q15399 786 aa6.05□□□□□ -1.44
CDC42BPA-207ENST00000441725 ZNF394Q53GI3 561 aa6.05□□□□□ -1.44
CDC42BPA-207ENST00000441725 CCDC116Q8IYX3 515 aa6.05□□□□□ -1.44
CDC42BPA-207ENST00000441725 ALDH16A1Q8IZ83 802 aa6.05□□□□□ -1.44
CDC42BPA-207ENST00000441725 CRELD1Q96HD1 420 aa6.05□□□□□ -1.44
CDC42BPA-207ENST00000441725 KLK14Q9P0G3 267 aa6.05□□□□□ -1.44
CDC42BPA-207ENST00000441725 CHMP3Q9Y3E7 222 aa6.05□□□□□ -1.44
CDC42BPA-207ENST00000441725 PCDHGB7Q9Y5F8 929 aa6.05□□□□□ -1.44
CDC42BPA-207ENST00000441725 CDK2AP1O14519 115 aa6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 USP5P45974 858 aa6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 RACK1P63244 317 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 ZDHHC1Q8WTX9 485 aa6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 CNKSR1Q969H4 720 aa6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 NLRP2Q9NX02 1062 aa6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 HCN4Q9Y3Q4 1203 aa6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 SERTM1A2A2V5 107 aa6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 RPIAP49247 311 aa6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 ZNF598Q86UK7 904 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 XAGE2Q96GT9 111 aa6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 CSRNP1Q96S65 589 aa6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 GMLQ99445 158 aa6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 CUEDC1Q9NWM3 386 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 HRH3Q9Y5N1 445 aa6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 AK5Q9Y6K8 562 aa6.04□□□□□ -1.44
CDC42BPA-207ENST00000441725 EIF1AYO14602 144 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 HIRAP54198 1017 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 C11orf91Q3C1V1 193 aa6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 ZNF295-AS1Q8N0V1 137 aa6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 FBF1Q8TES7 1133 aa6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 ZNF232Q9UNY5 417 aa6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 PARP3Q9Y6F1 533 aa6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 A6NHS1 94 aa6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 NR3C2P08235 984 aa6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 NOS2P35228 1153 aa6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 GNL2Q13823 731 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 RTN1Q16799 776 aa6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 CCDC144BQ3MJ40 725 aa6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 ZNF697Q5TEC3 545 aa6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 TRIM52Q96A61 297 aa6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 IFT43Q96FT9 208 aa6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 DDX41Q9UJV9 622 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-207ENST00000441725 ADH1CP00326 375 aa6.02□□□□□ -1.45
CDC42BPA-207ENST00000441725 LAPTM4AQ15012 233 aa6.02□□□□□ -1.45
CDC42BPA-207ENST00000441725 TEAD4Q15561 434 aa6.02□□□□□ -1.45
CDC42BPA-207ENST00000441725 RC3H1Q5TC82 1133 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-207ENST00000441725 GPR152Q8TDT2 470 aa6.02□□□□□ -1.45
CDC42BPA-207ENST00000441725 L3MBTL2Q969R5 705 aa6.02□□□□□ -1.45
CDC42BPA-207ENST00000441725 NUDT16Q96DE0 195 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-207ENST00000441725 ESYT1Q9BSJ8 1104 aa6.02□□□□□ -1.45
CDC42BPA-207ENST00000441725 INPP5FQ9Y2H2 1132 aa6.02□□□□□ -1.45
CDC42BPA-207ENST00000441725 OPLAHO14841 1288 aa6.01□□□□□ -1.45
CDC42BPA-207ENST00000441725 GFRA3O60609 400 aa6.01□□□□□ -1.45
CDC42BPA-207ENST00000441725 C8orf34Q49A92 452 aa6.01□□□□□ -1.45
CDC42BPA-207ENST00000441725 ZNF662Q6ZS27 426 aa6.01□□□□□ -1.45
CDC42BPA-207ENST00000441725 TRIM67Q6ZTA4 783 aa6.01□□□□□ -1.45
CDC42BPA-207ENST00000441725 NOP9Q86U38 636 aaKnown RBP6.01□□□□□ -1.45
CDC42BPA-207ENST00000441725 GGNBP2Q9H3C7 697 aa6.01□□□□□ -1.45
CDC42BPA-207ENST00000441725 CABP1Q9NZU7 370 aa6.01□□□□□ -1.45
CDC42BPA-207ENST00000441725 ANKRD62A6NC57 917 aa6.01□□□□□ -1.45
CDC42BPA-207ENST00000441725 NRG2O14511 850 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-207ENST00000441725 KDF1Q8NAX2 398 aaPredicted RBP6.01□□□□□ -1.45
CDC42BPA-207ENST00000441725 ARMC5Q96C12 935 aa6.01□□□□□ -1.45
CDC42BPA-207ENST00000441725 PHACTR1Q9C0D0 580 aa6.01□□□□□ -1.45
CDC42BPA-207ENST00000441725 PDZRN3Q9UPQ7 1066 aa6.01□□□□□ -1.45
CDC42BPA-207ENST00000441725 SIAH2O43255 324 aa6□□□□□ -1.45
CDC42BPA-207ENST00000441725 NR5A1Q13285 461 aa6□□□□□ -1.45
CDC42BPA-207ENST00000441725 PI16Q6UXB8 463 aa6□□□□□ -1.45
CDC42BPA-207ENST00000441725 USP48Q86UV5 1035 aa6□□□□□ -1.45
CDC42BPA-207ENST00000441725 TREML1Q86YW5 311 aa6□□□□□ -1.45
CDC42BPA-207ENST00000441725 NBPF15Q8N660 670 aa6□□□□□ -1.45
CDC42BPA-207ENST00000441725 PMFBP1Q8TBY8 1022 aa6□□□□□ -1.45
CDC42BPA-207ENST00000441725 HIRIP3Q9BW71 556 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-207ENST00000441725 CHMP4AQ9BY43 222 aa6□□□□□ -1.45
CDC42BPA-207ENST00000441725 SRA1Q9HD15 236 aaKnown RBP6□□□□□ -1.45
CDC42BPA-207ENST00000441725 CD2BP2O95400 341 aaKnown RBP6□□□□□ -1.45
CDC42BPA-207ENST00000441725 ARID5AQ03989 594 aa6□□□□□ -1.45
CDC42BPA-207ENST00000441725 LARP7Q4G0J3 582 aaKnown RBP eCLIP6□□□□□ -1.45
CDC42BPA-207ENST00000441725 MPNDQ8N594 471 aa6□□□□□ -1.45
CDC42BPA-207ENST00000441725 FHDC1Q9C0D6 1143 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-207ENST00000441725 PIF1Q9H611 641 aa6□□□□□ -1.45
CDC42BPA-207ENST00000441725 SPG7Q9UQ90 795 aa6□□□□□ -1.45
CDC42BPA-207ENST00000441725 BCS1LQ9Y276 419 aa6□□□□□ -1.45
CDC42BPA-207ENST00000441725 NCLP19338 710 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 EIF4BP23588 611 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 PRR20EP86478 221 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 PRR20CP86479 221 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 PRR20DP86480 221 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 PRR20BP86481 221 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 PRR20AP86496 221 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 RBL2Q08999 1139 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 CLN3Q13286 438 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 ZNF654Q8IZM8 581 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 GDF9O60383 454 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 CENPCQ03188 943 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 MEI1Q5TIA1 1274 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 HS2ST1Q7LGA3 356 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms