RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 MTMR6Q9Y217 621 aa13.79□□□□□ -0.2
SMPD4-209ENST00000439886 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.79□□□□□ -0.2
SMPD4-209ENST00000439886 MRVI1Q9Y6F6 885 aa13.79□□□□□ -0.2
SMPD4-209ENST00000439886 RIMS2Q9UQ26 1411 aa13.79□□□□□ -0.2
SMPD4-209ENST00000439886 USP27XA6NNY8 438 aa13.79□□□□□ -0.2
SMPD4-209ENST00000439886 RAB11FIP3O75154 756 aa13.79□□□□□ -0.2
SMPD4-209ENST00000439886 ADCK5Q3MIX3 580 aa13.79□□□□□ -0.2
SMPD4-209ENST00000439886 ZNF75DP51815 510 aa13.79□□□□□ -0.2
SMPD4-209ENST00000439886 PAXBP1Q9Y5B6 917 aa13.79□□□□□ -0.2
SMPD4-209ENST00000439886 GTF2A1P52655 376 aaPredicted RBP13.78□□□□□ -0.2
SMPD4-209ENST00000439886 SLC20A2Q08357 652 aa13.78□□□□□ -0.2
SMPD4-209ENST00000439886 FLIIQ13045 1269 aa13.78□□□□□ -0.2
SMPD4-209ENST00000439886 PPP1R42Q7Z4L9 355 aa13.78□□□□□ -0.2
SMPD4-209ENST00000439886 PTPRCP08575 1304 aa13.78□□□□□ -0.2
SMPD4-209ENST00000439886 TXNDC2Q86VQ3 553 aa13.78□□□□□ -0.2
SMPD4-209ENST00000439886 RGS12O14924 1447 aa13.78□□□□□ -0.2
SMPD4-209ENST00000439886 RPAP1Q9BWH6 1393 aaPredicted RBP13.77□□□□□ -0.2
SMPD4-209ENST00000439886 SMC2O95347 1197 aa13.77□□□□□ -0.2
SMPD4-209ENST00000439886 HSP90AB2PQ58FF8 381 aa13.77□□□□□ -0.2
SMPD4-209ENST00000439886 KIF18AQ8NI77 898 aa13.77□□□□□ -0.2
SMPD4-209ENST00000439886 NOL10Q9BSC4 688 aaKnown RBP13.77□□□□□ -0.2
SMPD4-209ENST00000439886 HTATSF1O43719 755 aaKnown RBP13.77□□□□□ -0.21
SMPD4-209ENST00000439886 NPM1P06748 294 aaKnown RBP eCLIP13.77□□□□□ -0.21
SMPD4-209ENST00000439886 TOMM22Q9NS69 142 aa13.77□□□□□ -0.21
SMPD4-209ENST00000439886 GEMIN8Q9NWZ8 242 aaKnown RBP13.77□□□□□ -0.21
SMPD4-209ENST00000439886 DDX41Q9UJV9 622 aaKnown RBP13.77□□□□□ -0.21
SMPD4-209ENST00000439886 GABPB1Q06547 395 aaPredicted RBP13.77□□□□□ -0.21
SMPD4-209ENST00000439886 CCDC144BQ3MJ40 725 aa13.77□□□□□ -0.21
SMPD4-209ENST00000439886 CCDC144CPQ8IYA2 1237 aa13.77□□□□□ -0.21
SMPD4-209ENST00000439886 ZNF397Q8NF99 534 aaPredicted RBP13.77□□□□□ -0.21
SMPD4-209ENST00000439886 RUFY2Q8WXA3 655 aa13.77□□□□□ -0.21
SMPD4-209ENST00000439886 PLCD4Q9BRC7 762 aa13.77□□□□□ -0.21
SMPD4-209ENST00000439886 PIK3R4Q99570 1358 aa13.76□□□□□ -0.21
SMPD4-209ENST00000439886 ANXA1P04083 346 aa13.76□□□□□ -0.21
SMPD4-209ENST00000439886 IFIT2P09913 472 aaKnown RBP13.76□□□□□ -0.21
SMPD4-209ENST00000439886 ATP8B2P98198 1209 aa13.76□□□□□ -0.21
SMPD4-209ENST00000439886 KMT5BQ4FZB7 885 aa13.76□□□□□ -0.21
SMPD4-209ENST00000439886 SHROOM2Q13796 1616 aa13.76□□□□□ -0.21
SMPD4-209ENST00000439886 ATP10DQ9P241 1426 aa13.76□□□□□ -0.21
SMPD4-209ENST00000439886 RPGRIP1LQ68CZ1 1315 aa13.76□□□□□ -0.21
SMPD4-209ENST00000439886 NR1I2O75469 434 aa13.76□□□□□ -0.21
SMPD4-209ENST00000439886 PTH1RQ03431 593 aa13.76□□□□□ -0.21
SMPD4-209ENST00000439886 TERF2Q15554 542 aa13.76□□□□□ -0.21
SMPD4-209ENST00000439886 ME3Q16798 604 aa13.76□□□□□ -0.21
SMPD4-209ENST00000439886 ERCC6LQ2NKX8 1250 aa13.76□□□□□ -0.21
SMPD4-209ENST00000439886 CALCOCO1Q9P1Z2 691 aa13.76□□□□□ -0.21
SMPD4-209ENST00000439886 LRRC7Q96NW7 1537 aa13.76□□□□□ -0.21
SMPD4-209ENST00000439886 CCDC69A6NI79 296 aa13.75□□□□□ -0.21
SMPD4-209ENST00000439886 RAPGEF3O95398 923 aa13.75□□□□□ -0.21
SMPD4-209ENST00000439886 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
SMPD4-209ENST00000439886 GUCY1B3Q02153 619 aa13.75□□□□□ -0.21
SMPD4-209ENST00000439886 SGSM2O43147 1006 aa13.75□□□□□ -0.21
SMPD4-209ENST00000439886 SLFN14P0C7P3 912 aa13.75□□□□□ -0.21
SMPD4-209ENST00000439886 FBXO38Q6PIJ6 1188 aa13.75□□□□□ -0.21
SMPD4-209ENST00000439886 RHPN1Q8TCX5 695 aa13.75□□□□□ -0.21
SMPD4-209ENST00000439886 OSBPL3Q9H4L5 887 aa13.75□□□□□ -0.21
SMPD4-209ENST00000439886 MYOM2P54296 1465 aa13.75□□□□□ -0.21
SMPD4-209ENST00000439886 CTIFO43310 598 aaKnown RBP13.75□□□□□ -0.21
SMPD4-209ENST00000439886 CAPN2P17655 700 aa13.75□□□□□ -0.21
SMPD4-209ENST00000439886 LARP1Q6PKG0 1096 aaKnown RBP13.75□□□□□ -0.21
SMPD4-209ENST00000439886 MNS1Q8NEH6 495 aa13.75□□□□□ -0.21
SMPD4-209ENST00000439886 SDF4Q9BRK5 362 aa13.75□□□□□ -0.21
SMPD4-209ENST00000439886 FAM135BQ49AJ0 1406 aa13.75□□□□□ -0.21
SMPD4-209ENST00000439886 CHL1O00533 1208 aa13.74□□□□□ -0.21
SMPD4-209ENST00000439886 EIF4A2Q14240 407 aaKnown RBP13.74□□□□□ -0.21
SMPD4-209ENST00000439886 SKIDA1Q1XH10 827 aa13.74□□□□□ -0.21
SMPD4-209ENST00000439886 ISM2Q6H9L7 571 aa13.74□□□□□ -0.21
SMPD4-209ENST00000439886 LRRC2Q9BYS8 371 aa13.74□□□□□ -0.21
SMPD4-209ENST00000439886 TSPYL1Q9H0U9 437 aa13.74□□□□□ -0.21
SMPD4-209ENST00000439886 QRICH2Q9H0J4 1663 aa13.74□□□□□ -0.21
SMPD4-209ENST00000439886 NUTM2GQ5VZR2 741 aa13.74□□□□□ -0.21
SMPD4-209ENST00000439886 SYT10Q6XYQ8 523 aa13.74□□□□□ -0.21
SMPD4-209ENST00000439886 RAD50Q92878 1312 aa13.74□□□□□ -0.21
SMPD4-209ENST00000439886 CCDC30Q5VVM6 783 aa13.74□□□□□ -0.21
SMPD4-209ENST00000439886 BIN1O00499 593 aa13.73□□□□□ -0.21
SMPD4-209ENST00000439886 NRDCO43847 1150 aa13.73□□□□□ -0.21
SMPD4-209ENST00000439886 AMPHP49418 695 aa13.73□□□□□ -0.21
SMPD4-209ENST00000439886 FBXO31Q5XUX0 539 aaPredicted RBP13.73□□□□□ -0.21
SMPD4-209ENST00000439886 BLOC1S2Q6QNY1 142 aa13.73□□□□□ -0.21
SMPD4-209ENST00000439886 CLASRPQ8N2M8 674 aaKnown RBP13.73□□□□□ -0.21
SMPD4-209ENST00000439886 SIL1Q9H173 461 aa13.73□□□□□ -0.21
SMPD4-209ENST00000439886 RSPH14Q9UHP6 348 aa13.73□□□□□ -0.21
SMPD4-209ENST00000439886 FANCAO15360 1455 aa13.73□□□□□ -0.21
SMPD4-209ENST00000439886 CCDC73Q6ZRK6 1079 aa13.73□□□□□ -0.21
SMPD4-209ENST00000439886 HYPKQ9NX55 129 aa13.73□□□□□ -0.21
SMPD4-209ENST00000439886 SLU7O95391 586 aaKnown RBP13.72□□□□□ -0.21
SMPD4-209ENST00000439886 PDCP20941 246 aa13.72□□□□□ -0.21
SMPD4-209ENST00000439886 TMEM87AQ8NBN3 555 aa13.72□□□□□ -0.21
SMPD4-209ENST00000439886 NEK11Q8NG66 645 aa13.72□□□□□ -0.21
SMPD4-209ENST00000439886 ZSCAN31Q96LW9 406 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-209ENST00000439886 FUCA2Q9BTY2 467 aa13.72□□□□□ -0.21
SMPD4-209ENST00000439886 SCAND2PQ9GZW5 306 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-209ENST00000439886 ADGRB2O60241 1585 aa13.72□□□□□ -0.21
SMPD4-209ENST00000439886 SNW1Q13573 536 aaKnown RBP13.72□□□□□ -0.21
SMPD4-209ENST00000439886 SF3A1Q15459 793 aaKnown RBP13.72□□□□□ -0.21
SMPD4-209ENST00000439886 HDGFL1Q5TGJ6 251 aa13.72□□□□□ -0.21
SMPD4-209ENST00000439886 FSD1Q9BTV5 496 aa13.72□□□□□ -0.21
SMPD4-209ENST00000439886 PHAXQ9H814 394 aaKnown RBP13.72□□□□□ -0.21
SMPD4-209ENST00000439886 TPCN1Q9ULQ1 816 aa13.72□□□□□ -0.21
SMPD4-209ENST00000439886 KINO60870 393 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms