RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 KCNH5Q8NCM2 988 aa8.31□□□□□ -1.08
ECHDC1-208ENST00000436638 PRKD2Q9BZL6 878 aa8.31□□□□□ -1.08
ECHDC1-208ENST00000436638 PCDHGC3Q9UN70 934 aa8.31□□□□□ -1.08
ECHDC1-208ENST00000436638 PNPLA6Q8IY17 1366 aa8.31□□□□□ -1.08
ECHDC1-208ENST00000436638 SSH2Q76I76 1423 aa8.3□□□□□ -1.08
ECHDC1-208ENST00000436638 ZBTB7CA1YPR0 619 aa8.3□□□□□ -1.08
ECHDC1-208ENST00000436638 FYB1O15117 783 aa8.3□□□□□ -1.08
ECHDC1-208ENST00000436638 GGNBP2Q9H3C7 697 aa8.3□□□□□ -1.08
ECHDC1-208ENST00000436638 PRDM9Q9NQV7 894 aa8.3□□□□□ -1.08
ECHDC1-208ENST00000436638 TRPM3Q9HCF6 1732 aaPredicted RBP8.29□□□□□ -1.08
ECHDC1-208ENST00000436638 MSS51Q4VC12 460 aa8.29□□□□□ -1.08
ECHDC1-208ENST00000436638 CC2D1BQ5T0F9 858 aaKnown RBP8.29□□□□□ -1.08
ECHDC1-208ENST00000436638 RIC3Q7Z5B4 369 aa8.29□□□□□ -1.08
ECHDC1-208ENST00000436638 MORC1Q86VD1 984 aa8.29□□□□□ -1.08
ECHDC1-208ENST00000436638 ANKLE1Q8NAG6 615 aa8.29□□□□□ -1.08
ECHDC1-208ENST00000436638 CABLES1Q8TDN4 633 aa8.29□□□□□ -1.08
ECHDC1-208ENST00000436638 NSD2O96028 1365 aa8.29□□□□□ -1.08
ECHDC1-208ENST00000436638 USP31Q70CQ4 1352 aa8.29□□□□□ -1.08
ECHDC1-208ENST00000436638 NRKQ7Z2Y5 1582 aa8.28□□□□□ -1.08
ECHDC1-208ENST00000436638 ADAMTS2O95450 1211 aa8.28□□□□□ -1.08
ECHDC1-208ENST00000436638 GCP02774 474 aa8.28□□□□□ -1.08
ECHDC1-208ENST00000436638 CSPP1Q1MSJ5 1256 aa8.28□□□□□ -1.08
ECHDC1-208ENST00000436638 RSBN1LQ6PCB5 846 aaPredicted RBP8.28□□□□□ -1.08
ECHDC1-208ENST00000436638 FAM117AQ9C073 453 aa8.28□□□□□ -1.08
ECHDC1-208ENST00000436638 SHPRHQ149N8 1683 aa8.27□□□□□ -1.08
ECHDC1-208ENST00000436638 ALS2Q96Q42 1657 aa8.27□□□□□ -1.08
ECHDC1-208ENST00000436638 SPTLC1O15269 473 aa8.27□□□□□ -1.09
ECHDC1-208ENST00000436638 PER1O15534 1290 aaPredicted RBP8.27□□□□□ -1.09
ECHDC1-208ENST00000436638 ZC3H6P61129 1189 aaKnown RBP8.27□□□□□ -1.09
ECHDC1-208ENST00000436638 MYSM1Q5VVJ2 828 aa8.27□□□□□ -1.09
ECHDC1-208ENST00000436638 RETREG3Q86VR2 466 aa8.27□□□□□ -1.09
ECHDC1-208ENST00000436638 RSPH6AQ9H0K4 717 aa8.27□□□□□ -1.09
ECHDC1-208ENST00000436638 PRDM11Q9NQV5 511 aa8.27□□□□□ -1.09
ECHDC1-208ENST00000436638 FCF1Q9Y324 198 aaKnown RBP8.27□□□□□ -1.09
ECHDC1-208ENST00000436638 PCDHB15Q9Y5E8 787 aa8.27□□□□□ -1.09
ECHDC1-208ENST00000436638 USP19O94966 1318 aa8.27□□□□□ -1.09
ECHDC1-208ENST00000436638 COL22A1Q8NFW1 1626 aaPredicted RBP8.26□□□□□ -1.09
ECHDC1-208ENST00000436638 NPC1L1Q9UHC9 1359 aa8.26□□□□□ -1.09
ECHDC1-208ENST00000436638 SLC19A1P41440 591 aa8.26□□□□□ -1.09
ECHDC1-208ENST00000436638 TNNT2P45379 298 aaPredicted RBP8.26□□□□□ -1.09
ECHDC1-208ENST00000436638 AMPHP49418 695 aa8.26□□□□□ -1.09
ECHDC1-208ENST00000436638 FGD1P98174 961 aa8.26□□□□□ -1.09
ECHDC1-208ENST00000436638 DDRGK1Q96HY6 314 aa8.26□□□□□ -1.09
ECHDC1-208ENST00000436638 NGLY1Q96IV0 654 aa8.26□□□□□ -1.09
ECHDC1-208ENST00000436638 POLR3EQ9NVU0 708 aa8.26□□□□□ -1.09
ECHDC1-208ENST00000436638 BCCIPQ9P287 314 aaKnown RBP eCLIP8.26□□□□□ -1.09
ECHDC1-208ENST00000436638 PIK3C2AO00443 1686 aa8.26□□□□□ -1.09
ECHDC1-208ENST00000436638 KIF20BQ96Q89 1820 aa8.26□□□□□ -1.09
ECHDC1-208ENST00000436638 MED1Q15648 1581 aaPredicted RBP8.26□□□□□ -1.09
ECHDC1-208ENST00000436638 PPM1GO15355 546 aaPredicted RBP8.25□□□□□ -1.09
ECHDC1-208ENST00000436638 ANP32CO43423 234 aa8.25□□□□□ -1.09
ECHDC1-208ENST00000436638 GJA5P36382 358 aa8.25□□□□□ -1.09
ECHDC1-208ENST00000436638 MTMR2Q13614 643 aa8.25□□□□□ -1.09
ECHDC1-208ENST00000436638 C8orf37Q96NL8 207 aa8.25□□□□□ -1.09
ECHDC1-208ENST00000436638 V9GY48 417 aaPredicted RBP8.25□□□□□ -1.09
ECHDC1-208ENST00000436638 OVOS2A0A0J9YW53 1432 aa8.25□□□□□ -1.09
ECHDC1-208ENST00000436638 OVOS2Q6IE36 1432 aa8.25□□□□□ -1.09
ECHDC1-208ENST00000436638 SLIT3O75094 1523 aa8.24□□□□□ -1.09
ECHDC1-208ENST00000436638 IGSF3O75054 1194 aa8.24□□□□□ -1.09
ECHDC1-208ENST00000436638 MMP16P51512 607 aa8.24□□□□□ -1.09
ECHDC1-208ENST00000436638 EVA1CP58658 441 aa8.24□□□□□ -1.09
ECHDC1-208ENST00000436638 CHRNA2Q15822 529 aa8.24□□□□□ -1.09
ECHDC1-208ENST00000436638 PLA2G2CQ5R387 149 aa8.24□□□□□ -1.09
ECHDC1-208ENST00000436638 CCDC24Q8N4L8 307 aa8.24□□□□□ -1.09
ECHDC1-208ENST00000436638 LIMD1Q9UGP4 676 aa8.24□□□□□ -1.09
ECHDC1-208ENST00000436638 KIAA0232Q92628 1395 aa8.23□□□□□ -1.09
ECHDC1-208ENST00000436638 PHRF1Q9P1Y6 1649 aaKnown RBP8.23□□□□□ -1.09
ECHDC1-208ENST00000436638 CSB-PGBD3P0DP91 1061 aa8.23□□□□□ -1.09
ECHDC1-208ENST00000436638 RRS1Q15050 365 aaKnown RBP8.23□□□□□ -1.09
ECHDC1-208ENST00000436638 RALBP1Q15311 655 aa8.23□□□□□ -1.09
ECHDC1-208ENST00000436638 LIAT1Q6ZQX7 453 aa8.23□□□□□ -1.09
ECHDC1-208ENST00000436638 ARHGEF25Q86VW2 580 aa8.23□□□□□ -1.09
ECHDC1-208ENST00000436638 PRR7Q8TB68 274 aa8.23□□□□□ -1.09
ECHDC1-208ENST00000436638 ZBTB3Q9H5J0 574 aa8.23□□□□□ -1.09
ECHDC1-208ENST00000436638 CPDO75976 1380 aa8.22□□□□□ -1.09
ECHDC1-208ENST00000436638 AATKQ6ZMQ8 1374 aa8.22□□□□□ -1.09
ECHDC1-208ENST00000436638 FAM83GA6ND36 823 aa8.22□□□□□ -1.09
ECHDC1-208ENST00000436638 SPDYE5A6NIY4 337 aa8.22□□□□□ -1.09
ECHDC1-208ENST00000436638 DXOO77932 396 aaKnown RBP8.22□□□□□ -1.09
ECHDC1-208ENST00000436638 JUNDP17535 347 aa8.22□□□□□ -1.09
ECHDC1-208ENST00000436638 FBLN1P23142 703 aa8.22□□□□□ -1.09
ECHDC1-208ENST00000436638 CLK2P49760 499 aaKnown RBP8.22□□□□□ -1.09
ECHDC1-208ENST00000436638 IL27Q8NEV9 243 aa8.22□□□□□ -1.09
ECHDC1-208ENST00000436638 CFAP53Q96M91 514 aa8.22□□□□□ -1.09
ECHDC1-208ENST00000436638 IRX2Q9BZI1 471 aaPredicted RBP8.22□□□□□ -1.09
ECHDC1-208ENST00000436638 STRN4Q9NRL3 753 aa8.22□□□□□ -1.09
ECHDC1-208ENST00000436638 ANKRD26Q9UPS8 1709 aa8.22□□□□□ -1.09
ECHDC1-208ENST00000436638 MAP3K19Q56UN5 1328 aa8.22□□□□□ -1.09
ECHDC1-208ENST00000436638 LRP6O75581 1613 aa8.21□□□□□ -1.09
ECHDC1-208ENST00000436638 USP54Q70EL1 1684 aa8.21□□□□□ -1.09
ECHDC1-208ENST00000436638 ZBTB24O43167 697 aaPredicted RBP8.21□□□□□ -1.1
ECHDC1-208ENST00000436638 ZNF772Q68DY9 489 aaPredicted RBP8.21□□□□□ -1.1
ECHDC1-208ENST00000436638 IP6K1Q92551 441 aa8.21□□□□□ -1.1
ECHDC1-208ENST00000436638 EMID1Q96A84 441 aaPredicted RBP8.21□□□□□ -1.1
ECHDC1-208ENST00000436638 LTV1Q96GA3 475 aaPredicted RBP8.21□□□□□ -1.1
ECHDC1-208ENST00000436638 BTG4Q9NY30 223 aa8.21□□□□□ -1.1
ECHDC1-208ENST00000436638 USP21Q9UK80 565 aa8.21□□□□□ -1.1
ECHDC1-208ENST00000436638 AFF2P51816 1311 aa8.21□□□□□ -1.1
ECHDC1-208ENST00000436638 RTL1A6NKG5 1358 aa8.21□□□□□ -1.1
ECHDC1-208ENST00000436638 ABCA3Q99758 1704 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms