RNA–Protein interactions for RNA: ENST00000431387.8

NF1-204, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-204ENST00000431387 PPP4R3BQ5MIZ7 849 aa16.34■□□□□ 0.21
NF1-204ENST00000431387 LTN1O94822 1766 aa16.34■□□□□ 0.21
NF1-204ENST00000431387 DMTNQ08495 405 aa16.34■□□□□ 0.21
NF1-204ENST00000431387 FER1L4A9Z1Z3 1794 aa16.34■□□□□ 0.21
NF1-204ENST00000431387 ADCY5O95622 1261 aa16.33■□□□□ 0.21
NF1-204ENST00000431387 HCLS1P14317 486 aaPredicted RBP16.33■□□□□ 0.21
NF1-204ENST00000431387 LRRC59Q96AG4 307 aaKnown RBP16.33■□□□□ 0.21
NF1-204ENST00000431387 MED1Q15648 1581 aaPredicted RBP16.33■□□□□ 0.2
NF1-204ENST00000431387 SGSM2O43147 1006 aa16.33■□□□□ 0.2
NF1-204ENST00000431387 IGSF3O75054 1194 aa16.33■□□□□ 0.2
NF1-204ENST00000431387 PIBF1Q8WXW3 757 aa16.33■□□□□ 0.2
NF1-204ENST00000431387 BTBD11A6QL63 1104 aa16.32■□□□□ 0.2
NF1-204ENST00000431387 EPB41L2O43491 1005 aaKnown RBP16.32■□□□□ 0.2
NF1-204ENST00000431387 HOXB7P09629 217 aa16.32■□□□□ 0.2
NF1-204ENST00000431387 MPRIPQ6WCQ1 1025 aa16.32■□□□□ 0.2
NF1-204ENST00000431387 LARP6Q9BRS8 491 aaKnown RBP16.32■□□□□ 0.2
NF1-204ENST00000431387 TEFQ10587 303 aa16.32■□□□□ 0.2
NF1-204ENST00000431387 RAD50Q92878 1312 aa16.32■□□□□ 0.2
NF1-204ENST00000431387 NFAT5O94916 1531 aa16.32■□□□□ 0.2
NF1-204ENST00000431387 ADCY9O60503 1353 aa16.32■□□□□ 0.2
NF1-204ENST00000431387 ZNF530Q6P9A1 599 aaPredicted RBP16.32■□□□□ 0.2
NF1-204ENST00000431387 CNTROBQ8N137 903 aa16.32■□□□□ 0.2
NF1-204ENST00000431387 LSG1Q9H089 658 aaKnown RBP16.31■□□□□ 0.2
NF1-204ENST00000431387 SNX14Q9Y5W7 946 aa16.31■□□□□ 0.2
NF1-204ENST00000431387 SYAP1Q96A49 352 aaPredicted RBP16.31■□□□□ 0.2
NF1-204ENST00000431387 PSME1Q06323 249 aa16.3■□□□□ 0.2
NF1-204ENST00000431387 AKAP4Q5JQC9 854 aa16.3■□□□□ 0.2
NF1-204ENST00000431387 CWC27Q6UX04 472 aaKnown RBP16.3■□□□□ 0.2
NF1-204ENST00000431387 KDM3BQ7LBC6 1761 aa16.3■□□□□ 0.2
NF1-204ENST00000431387 SETD1BQ9UPS6 1966 aaKnown RBP16.3■□□□□ 0.2
NF1-204ENST00000431387 ESCO1Q5FWF5 840 aa16.3■□□□□ 0.2
NF1-204ENST00000431387 RASEFQ8IZ41 740 aa16.3■□□□□ 0.2
NF1-204ENST00000431387 BCL2L12Q9HB09 334 aa16.3■□□□□ 0.2
NF1-204ENST00000431387 OS9Q13438 667 aaPredicted RBP16.29■□□□□ 0.2
NF1-204ENST00000431387 SPG7Q9UQ90 795 aa16.29■□□□□ 0.2
NF1-204ENST00000431387 CNPY2Q9Y2B0 182 aa16.29■□□□□ 0.2
NF1-204ENST00000431387 KIF3AQ9Y496 699 aa16.29■□□□□ 0.2
NF1-204ENST00000431387 HSP90AB4PQ58FF6 505 aa16.29■□□□□ 0.2
NF1-204ENST00000431387 PRIMPOLQ96LW4 560 aa16.28■□□□□ 0.2
NF1-204ENST00000431387 TTC14Q96N46 770 aa16.28■□□□□ 0.2
NF1-204ENST00000431387 WDR33Q9C0J8 1336 aaKnown RBP16.28■□□□□ 0.2
NF1-204ENST00000431387 PLEKHO1Q53GL0 409 aaPredicted RBP16.28■□□□□ 0.2
NF1-204ENST00000431387 KCNH5Q8NCM2 988 aa16.28■□□□□ 0.2
NF1-204ENST00000431387 CHMP4AQ9BY43 222 aa16.28■□□□□ 0.2
NF1-204ENST00000431387 MAP3K2Q9Y2U5 619 aa16.28■□□□□ 0.2
NF1-204ENST00000431387 USP42Q9H9J4 1324 aaKnown RBP16.28■□□□□ 0.2
NF1-204ENST00000431387 AK2P54819 239 aa16.28■□□□□ 0.2
NF1-204ENST00000431387 PROSER3Q2NL68 480 aa16.28■□□□□ 0.2
NF1-204ENST00000431387 SPC24Q8NBT2 197 aa16.28■□□□□ 0.2
NF1-204ENST00000431387 DBF4Q9UBU7 674 aaPredicted RBP16.28■□□□□ 0.2
NF1-204ENST00000431387 RGPD2P0DJD1 1756 aa16.28■□□□□ 0.2
NF1-204ENST00000431387 RPAP1Q9BWH6 1393 aaPredicted RBP16.27■□□□□ 0.2
NF1-204ENST00000431387 RNMTO43148 476 aaKnown RBP16.27■□□□□ 0.2
NF1-204ENST00000431387 AP5Z1O43299 807 aa16.27■□□□□ 0.19
NF1-204ENST00000431387 GLRX3O76003 335 aaKnown RBP16.27■□□□□ 0.19
NF1-204ENST00000431387 HMGN5P82970 282 aaKnown RBP16.27■□□□□ 0.19
NF1-204ENST00000431387 PYCARDQ9ULZ3 195 aa16.27■□□□□ 0.19
NF1-204ENST00000431387 TTC41PQ6P2S7 1318 aa16.26■□□□□ 0.19
NF1-204ENST00000431387 PHF14O94880 888 aa16.26■□□□□ 0.19
NF1-204ENST00000431387 MTX1Q13505 466 aa16.26■□□□□ 0.19
NF1-204ENST00000431387 GIMAP6Q6P9H5 292 aa16.26■□□□□ 0.19
NF1-204ENST00000431387 RUFY3Q7L099 469 aa16.26■□□□□ 0.19
NF1-204ENST00000431387 C9orf78Q9NZ63 289 aaPredicted RBP16.26■□□□□ 0.19
NF1-204ENST00000431387 PA2G4Q9UQ80 394 aaKnown RBP16.26■□□□□ 0.19
NF1-204ENST00000431387 PRAMEF22A3QJZ6 481 aa16.26■□□□□ 0.19
NF1-204ENST00000431387 CPA1P15085 419 aa16.26■□□□□ 0.19
NF1-204ENST00000431387 U2AF2P26368 475 aaKnown RBP eCLIP16.26■□□□□ 0.194e-7■■■□□ 18.5
NF1-204ENST00000431387 UTP14CQ5TAP6 766 aaKnown RBP16.26■□□□□ 0.19
NF1-204ENST00000431387 CLASRPQ8N2M8 674 aaKnown RBP16.26■□□□□ 0.19
NF1-204ENST00000431387 PXDNQ92626 1479 aa16.26■□□□□ 0.19
NF1-204ENST00000431387 LMO7Q8WWI1 1683 aa16.26■□□□□ 0.19
NF1-204ENST00000431387 CWF19L2Q2TBE0 894 aaKnown RBP16.25■□□□□ 0.19
NF1-204ENST00000431387 BCL11BQ9C0K0 894 aaPredicted RBP16.25■□□□□ 0.19
NF1-204ENST00000431387 DIAPH3Q9NSV4 1193 aa16.25■□□□□ 0.19
NF1-204ENST00000431387 FIBPO43427 364 aa16.25■□□□□ 0.19
NF1-204ENST00000431387 GIGYF1O75420 1035 aaPredicted RBP16.25■□□□□ 0.19
NF1-204ENST00000431387 C1orf141Q5JVX7 400 aa16.25■□□□□ 0.19
NF1-204ENST00000431387 GTF2F1P35269 517 aaKnown RBP eCLIP16.24■□□□□ 0.195e-6■■■■□ 24.4
NF1-204ENST00000431387 AMOTQ4VCS5 1084 aa16.24■□□□□ 0.19
NF1-204ENST00000431387 LIMCH1Q9UPQ0 1083 aa16.24■□□□□ 0.19
NF1-204ENST00000431387 RIOK3O14730 519 aaKnown RBP16.24■□□□□ 0.19
NF1-204ENST00000431387 PTH1RQ03431 593 aa16.24■□□□□ 0.19
NF1-204ENST00000431387 KSR2Q6VAB6 950 aa16.24■□□□□ 0.19
NF1-204ENST00000431387 KCNF1Q9H3M0 494 aa16.24■□□□□ 0.19
NF1-204ENST00000431387 ALDH1L1O75891 902 aa16.24■□□□□ 0.19
NF1-204ENST00000431387 GCP02774 474 aa16.24■□□□□ 0.19
NF1-204ENST00000431387 CASTP20810 708 aaKnown RBP16.24■□□□□ 0.19
NF1-204ENST00000431387 CCDC183Q5T5S1 534 aa16.24■□□□□ 0.19
NF1-204ENST00000431387 PDCL2Q8N4E4 241 aa16.24■□□□□ 0.19
NF1-204ENST00000431387 ECHDC1Q9NTX5 307 aa16.24■□□□□ 0.19
NF1-204ENST00000431387 CRYBG1Q9Y4K1 1723 aa16.24■□□□□ 0.19
NF1-204ENST00000431387 TCHHQ07283 1943 aa16.23■□□□□ 0.19
NF1-204ENST00000431387 KDM4AO75164 1064 aa16.23■□□□□ 0.19
NF1-204ENST00000431387 ANKLE2Q86XL3 938 aa16.23■□□□□ 0.19
NF1-204ENST00000431387 FAM184AQ8NB25 1140 aa16.23■□□□□ 0.19
NF1-204ENST00000431387 SPTLC3Q9NUV7 552 aa16.23■□□□□ 0.19
NF1-204ENST00000431387 CHD2O14647 1828 aaKnown RBP16.23■□□□□ 0.19
NF1-204ENST00000431387 ADGRL3Q9HAR2 1447 aa16.23■□□□□ 0.19
NF1-204ENST00000431387 LARGE1O95461 756 aa16.22■□□□□ 0.19
NF1-204ENST00000431387 IFIT2P09913 472 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms