RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 MARK1Q9P0L2 795 aa7.91□□□□□ -1.14
LINC02541-201ENST00000427157 LOC100996750A0A140TA64 210 aa7.9□□□□□ -1.14
LINC02541-201ENST00000427157 PALM3A6NDB9 673 aaPredicted RBP7.9□□□□□ -1.14
LINC02541-201ENST00000427157 MSTNO14793 375 aa7.9□□□□□ -1.14
LINC02541-201ENST00000427157 DGKGP49619 791 aa7.9□□□□□ -1.14
LINC02541-201ENST00000427157 PCBP4P57723 403 aaKnown RBP7.9□□□□□ -1.14
LINC02541-201ENST00000427157 PSMA6P60900 246 aaKnown RBP7.9□□□□□ -1.14
LINC02541-201ENST00000427157 ZNF468Q5VIY5 522 aaPredicted RBP7.9□□□□□ -1.14
LINC02541-201ENST00000427157 TSEN2Q8NCE0 465 aaKnown RBP7.9□□□□□ -1.14
LINC02541-201ENST00000427157 KRTAP4-6Q9BYQ5 205 aa7.9□□□□□ -1.14
LINC02541-201ENST00000427157 KRBA1A5PL33 1030 aa7.89□□□□□ -1.15
LINC02541-201ENST00000427157 SFI1A8K8P3 1242 aa7.89□□□□□ -1.15
LINC02541-201ENST00000427157 M0R2N6 131 aa7.89□□□□□ -1.15
LINC02541-201ENST00000427157 DKK1O94907 266 aa7.89□□□□□ -1.15
LINC02541-201ENST00000427157 PROCP04070 461 aa7.89□□□□□ -1.15
LINC02541-201ENST00000427157 LAMC2Q13753 1193 aa7.89□□□□□ -1.15
LINC02541-201ENST00000427157 CHSY3Q70JA7 882 aa7.89□□□□□ -1.15
LINC02541-201ENST00000427157 SUV39H2Q9H5I1 410 aa7.89□□□□□ -1.15
LINC02541-201ENST00000427157 GPC6Q9Y625 555 aaPredicted RBP7.89□□□□□ -1.15
LINC02541-201ENST00000427157 GNB5O14775 395 aa7.88□□□□□ -1.15
LINC02541-201ENST00000427157 GRIN2CQ14957 1233 aa7.88□□□□□ -1.15
LINC02541-201ENST00000427157 POTEAQ6S8J7 498 aa7.88□□□□□ -1.15
LINC02541-201ENST00000427157 RHPN1Q8TCX5 695 aa7.88□□□□□ -1.15
LINC02541-201ENST00000427157 TFIP11Q9UBB9 837 aaKnown RBP7.88□□□□□ -1.15
LINC02541-201ENST00000427157 PRR12Q9ULL5 1215 aa7.88□□□□□ -1.15
LINC02541-201ENST00000427157 MAFBQ9Y5Q3 323 aaPredicted RBP7.88□□□□□ -1.15
LINC02541-201ENST00000427157 HIRAP54198 1017 aaPredicted RBP7.87□□□□□ -1.15
LINC02541-201ENST00000427157 ALYREFQ86V81 257 aaKnown RBP7.87□□□□□ -1.15
LINC02541-201ENST00000427157 C21orf2O43822 256 aa7.86□□□□□ -1.15
LINC02541-201ENST00000427157 RASA1P20936 1047 aa7.86□□□□□ -1.15
LINC02541-201ENST00000427157 HSH2DQ96JZ2 352 aa7.86□□□□□ -1.15
LINC02541-201ENST00000427157 PHACTR1Q9C0D0 580 aa7.86□□□□□ -1.15
LINC02541-201ENST00000427157 NEUROD4Q9HD90 331 aa7.86□□□□□ -1.15
LINC02541-201ENST00000427157 CHMP3Q9Y3E7 222 aa7.86□□□□□ -1.15
LINC02541-201ENST00000427157 HCN4Q9Y3Q4 1203 aa7.86□□□□□ -1.15
LINC02541-201ENST00000427157 PIK3R2O00459 728 aa7.85□□□□□ -1.15
LINC02541-201ENST00000427157 PPP1R12BO60237 982 aaPredicted RBP7.85□□□□□ -1.15
LINC02541-201ENST00000427157 SFSWAPQ12872 951 aaKnown RBP7.85□□□□□ -1.15
LINC02541-201ENST00000427157 C1orf53Q5VUE5 145 aa7.85□□□□□ -1.15
LINC02541-201ENST00000427157 SYT9Q86SS6 491 aa7.85□□□□□ -1.15
LINC02541-201ENST00000427157 RBM19Q9Y4C8 960 aaKnown RBP7.85□□□□□ -1.15
LINC02541-201ENST00000427157 CALR3Q96L12 384 aaKnown RBP7.84□□□□□ -1.15
LINC02541-201ENST00000427157 SLC30A3Q99726 388 aa7.84□□□□□ -1.15
LINC02541-201ENST00000427157 MDFIQ99750 246 aa7.84□□□□□ -1.15
LINC02541-201ENST00000427157 A6NJR5 290 aa7.83□□□□□ -1.16
LINC02541-201ENST00000427157 SEC13P55735 322 aa7.83□□□□□ -1.16
LINC02541-201ENST00000427157 CRTC2Q53ET0 693 aaPredicted RBP7.83□□□□□ -1.16
LINC02541-201ENST00000427157 ZNF280CQ8ND82 737 aa7.83□□□□□ -1.16
LINC02541-201ENST00000427157 PPP1R12CQ9BZL4 782 aa7.83□□□□□ -1.16
LINC02541-201ENST00000427157 ELOA3CA0A087WX78 387 aaPredicted RBP7.82□□□□□ -1.16
LINC02541-201ENST00000427157 ELOA3DA6NLF2 546 aaPredicted RBP7.82□□□□□ -1.16
LINC02541-201ENST00000427157 SIN3BO75182 1162 aa7.82□□□□□ -1.16
LINC02541-201ENST00000427157 TYRO3Q06418 890 aa7.82□□□□□ -1.16
LINC02541-201ENST00000427157 ELOA3BQ3SY89 546 aa7.82□□□□□ -1.16
LINC02541-201ENST00000427157 ELOA3Q8NG57 546 aa7.82□□□□□ -1.16
LINC02541-201ENST00000427157 SCG3Q8WXD2 468 aaKnown RBP7.82□□□□□ -1.16
LINC02541-201ENST00000427157 SUSD3Q96L08 255 aa7.82□□□□□ -1.16
LINC02541-201ENST00000427157 CEP63Q96MT8 703 aa7.82□□□□□ -1.16
LINC02541-201ENST00000427157 BRD7Q9NPI1 651 aa7.82□□□□□ -1.16
LINC02541-201ENST00000427157 NOP53Q9NZM5 478 aaKnown RBP7.82□□□□□ -1.16
LINC02541-201ENST00000427157 SPEM2Q0P670 501 aa7.81□□□□□ -1.16
LINC02541-201ENST00000427157 PTK7Q13308 1070 aa7.81□□□□□ -1.16
LINC02541-201ENST00000427157 RAB44Q7Z6P3 723 aaPredicted RBP7.81□□□□□ -1.16
LINC02541-201ENST00000427157 ALDH16A1Q8IZ83 802 aa7.81□□□□□ -1.16
LINC02541-201ENST00000427157 STAG2Q8N3U4 1231 aa7.81□□□□□ -1.16
LINC02541-201ENST00000427157 TRIM11Q96F44 468 aa7.81□□□□□ -1.16
LINC02541-201ENST00000427157 C2orf49Q9BVC5 232 aaPredicted RBP7.81□□□□□ -1.16
LINC02541-201ENST00000427157 ANKIB1Q9P2G1 1089 aa7.81□□□□□ -1.16
LINC02541-201ENST00000427157 ATAD2Q6PL18 1390 aa7.81□□□□□ -1.16
LINC02541-201ENST00000427157 ADAM23O75077 832 aa7.8□□□□□ -1.16
LINC02541-201ENST00000427157 DPYDQ12882 1025 aa7.8□□□□□ -1.16
LINC02541-201ENST00000427157 KANK4Q5T7N3 995 aaPredicted RBP7.8□□□□□ -1.16
LINC02541-201ENST00000427157 LARP1Q6PKG0 1096 aaKnown RBP7.8□□□□□ -1.16
LINC02541-201ENST00000427157 CHMP7Q8WUX9 453 aaPredicted RBP7.8□□□□□ -1.16
LINC02541-201ENST00000427157 ADARB2-AS1A8MUL3 147 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 USP17L15C9J2P7 530 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 USP17L10C9JJH3 530 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 USP17L13C9JLJ4 530 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 USP17L12C9JPN9 530 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 USP17L11C9JVI0 530 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 USP17L21D6R901 530 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 USP17L18D6R9N7 530 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 USP17L22D6RA61 530 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 USP17L17D6RBQ6 530 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 USP17L19D6RCP7 530 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 USP17L20D6RJB6 530 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 LGR5O75473 907 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 ALAS2P22557 587 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 BAG6P46379 1132 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 USP17L24Q0WX57 530 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 TNFRSF25Q93038 417 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 NGLY1Q96IV0 654 aa7.79□□□□□ -1.16
LINC02541-201ENST00000427157 C1QTNF9BB2RNN3 333 aa7.78□□□□□ -1.16
LINC02541-201ENST00000427157 CHRNA4P43681 627 aa7.78□□□□□ -1.16
LINC02541-201ENST00000427157 KCNQ4P56696 695 aa7.78□□□□□ -1.16
LINC02541-201ENST00000427157 CD163Q86VB7 1156 aa7.78□□□□□ -1.16
LINC02541-201ENST00000427157 GAS2L2Q8NHY3 880 aa7.78□□□□□ -1.16
LINC02541-201ENST00000427157 HINFPQ9BQA5 517 aa7.78□□□□□ -1.16
LINC02541-201ENST00000427157 PLVAPQ9BX97 442 aa7.78□□□□□ -1.16
LINC02541-201ENST00000427157 KCNH4Q9UQ05 1017 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms