RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 MEGF6O75095 1541 aa17.35■□□□□ 0.37
MSH5-206ENST00000423982 CUL4AQ13619 759 aa17.35■□□□□ 0.37
MSH5-206ENST00000423982 OSBPL3Q9H4L5 887 aa17.35■□□□□ 0.37
MSH5-206ENST00000423982 PTPRCP08575 1304 aa17.35■□□□□ 0.37
MSH5-206ENST00000423982 TATP17735 454 aaPredicted RBP17.34■□□□□ 0.37
MSH5-206ENST00000423982 PLEKHO1Q53GL0 409 aaPredicted RBP17.34■□□□□ 0.37
MSH5-206ENST00000423982 USP48Q86UV5 1035 aa17.34■□□□□ 0.37
MSH5-206ENST00000423982 IL17REQ8NFR9 667 aa17.34■□□□□ 0.37
MSH5-206ENST00000423982 CCDC9Q9Y3X0 531 aaKnown RBP17.34■□□□□ 0.37
MSH5-206ENST00000423982 HMMRO75330 724 aa17.34■□□□□ 0.37
MSH5-206ENST00000423982 C1orf141Q5JVX7 400 aa17.34■□□□□ 0.37
MSH5-206ENST00000423982 MAP3K5Q99683 1374 aa17.34■□□□□ 0.37
MSH5-206ENST00000423982 MAP4K4O95819 1239 aaPredicted RBP17.34■□□□□ 0.37
MSH5-206ENST00000423982 CHMLP26374 656 aa17.34■□□□□ 0.37
MSH5-206ENST00000423982 MX1P20591 662 aa17.33■□□□□ 0.36
MSH5-206ENST00000423982 USP25Q9UHP3 1055 aa17.33■□□□□ 0.36
MSH5-206ENST00000423982 SALL3Q9BXA9 1300 aa17.33■□□□□ 0.36
MSH5-206ENST00000423982 FAM177BA6PVY3 158 aa17.33■□□□□ 0.36
MSH5-206ENST00000423982 CSPP1Q1MSJ5 1256 aa17.33■□□□□ 0.36
MSH5-206ENST00000423982 SASS6Q6UVJ0 657 aa17.33■□□□□ 0.36
MSH5-206ENST00000423982 PRDM10Q9NQV6 1147 aa17.32■□□□□ 0.36
MSH5-206ENST00000423982 MCM5P33992 734 aa17.32■□□□□ 0.36
MSH5-206ENST00000423982 DDX54Q8TDD1 881 aaKnown RBP17.32■□□□□ 0.36
MSH5-206ENST00000423982 DNTTIP2Q5QJE6 756 aaKnown RBP17.31■□□□□ 0.36
MSH5-206ENST00000423982 LRRCC1Q9C099 1032 aa17.31■□□□□ 0.36
MSH5-206ENST00000423982 TTC12Q9H892 705 aaPredicted RBP17.31■□□□□ 0.36
MSH5-206ENST00000423982 IL1RAPL2Q9NP60 686 aa17.31■□□□□ 0.36
MSH5-206ENST00000423982 TSPYL4Q9UJ04 414 aa17.31■□□□□ 0.36
MSH5-206ENST00000423982 DYNC1I1O14576 645 aa17.31■□□□□ 0.36
MSH5-206ENST00000423982 LMO7Q8WWI1 1683 aa17.31■□□□□ 0.36
MSH5-206ENST00000423982 GNAI2P04899 355 aa17.3■□□□□ 0.36
MSH5-206ENST00000423982 KIAA2012Q0VF49 1180 aa17.3■□□□□ 0.36
MSH5-206ENST00000423982 NGLY1Q96IV0 654 aa17.3■□□□□ 0.36
MSH5-206ENST00000423982 CNPY2Q9Y2B0 182 aa17.3■□□□□ 0.36
MSH5-206ENST00000423982 SRCIN1Q9C0H9 1055 aa17.3■□□□□ 0.36
MSH5-206ENST00000423982 CRB1P82279 1406 aa17.29■□□□□ 0.36
MSH5-206ENST00000423982 AMOTQ4VCS5 1084 aa17.29■□□□□ 0.36
MSH5-206ENST00000423982 PRDM4Q9UKN5 801 aa17.29■□□□□ 0.36
MSH5-206ENST00000423982 MCCP23508 829 aa17.29■□□□□ 0.36
MSH5-206ENST00000423982 HCLS1P14317 486 aaPredicted RBP17.28■□□□□ 0.36
MSH5-206ENST00000423982 MCM2P49736 904 aa17.28■□□□□ 0.36
MSH5-206ENST00000423982 AKAP4Q5JQC9 854 aa17.28■□□□□ 0.36
MSH5-206ENST00000423982 NUTM1Q86Y26 1132 aa17.28■□□□□ 0.36
MSH5-206ENST00000423982 JCADQ9P266 1359 aa17.28■□□□□ 0.36
MSH5-206ENST00000423982 CYP27B1O15528 508 aa17.28■□□□□ 0.36
MSH5-206ENST00000423982 CARD10Q9BWT7 1032 aa17.28■□□□□ 0.36
MSH5-206ENST00000423982 TUBGCP6Q96RT7 1819 aa17.28■□□□□ 0.36
MSH5-206ENST00000423982 IL2RBP14784 551 aa17.27■□□□□ 0.36
MSH5-206ENST00000423982 CCT4P50991 539 aaKnown RBP17.27■□□□□ 0.36
MSH5-206ENST00000423982 TEFQ10587 303 aa17.27■□□□□ 0.36
MSH5-206ENST00000423982 INTS4Q96HW7 963 aaKnown RBP17.27■□□□□ 0.36
MSH5-206ENST00000423982 SPG7Q9UQ90 795 aa17.27■□□□□ 0.36
MSH5-206ENST00000423982 FAM208AQ9UK61 1670 aaKnown RBP17.27■□□□□ 0.36
MSH5-206ENST00000423982 FKBP5Q13451 457 aaPredicted RBP17.27■□□□□ 0.36
MSH5-206ENST00000423982 MAP7D2Q96T17 732 aa17.27■□□□□ 0.36
MSH5-206ENST00000423982 LRRFIP2Q9Y608 721 aaKnown RBP17.27■□□□□ 0.36
MSH5-206ENST00000423982 NCAPD2Q15021 1401 aa17.27■□□□□ 0.36
MSH5-206ENST00000423982 RPAP1Q9BWH6 1393 aaPredicted RBP17.27■□□□□ 0.35
MSH5-206ENST00000423982 COL22A1Q8NFW1 1626 aaPredicted RBP17.27■□□□□ 0.35
MSH5-206ENST00000423982 CPA1P15085 419 aa17.27■□□□□ 0.35
MSH5-206ENST00000423982 PLCB2Q00722 1185 aa17.27■□□□□ 0.35
MSH5-206ENST00000423982 MEX3CQ5U5Q3 659 aaKnown RBP17.27■□□□□ 0.35
MSH5-206ENST00000423982 SYAP1Q96A49 352 aaPredicted RBP17.27■□□□□ 0.35
MSH5-206ENST00000423982 EP400Q96L91 3159 aa17.26■□□□□ 0.35
MSH5-206ENST00000423982 ADCY5O95622 1261 aa17.26■□□□□ 0.35
MSH5-206ENST00000423982 KCNQ3O43525 872 aa17.26■□□□□ 0.35
MSH5-206ENST00000423982 PHKG2P15735 406 aa17.25■□□□□ 0.35
MSH5-206ENST00000423982 A0A0G2JS52 829 aa17.25■□□□□ 0.35
MSH5-206ENST00000423982 RNMTO43148 476 aaKnown RBP17.25■□□□□ 0.35
MSH5-206ENST00000423982 ANAPC15P60006 121 aa17.25■□□□□ 0.35
MSH5-206ENST00000423982 ZCRB1Q8TBF4 217 aaKnown RBP17.25■□□□□ 0.35
MSH5-206ENST00000423982 FLIIQ13045 1269 aa17.24■□□□□ 0.35
MSH5-206ENST00000423982 WDR33Q9C0J8 1336 aaKnown RBP17.24■□□□□ 0.35
MSH5-206ENST00000423982 FIBPO43427 364 aa17.24■□□□□ 0.35
MSH5-206ENST00000423982 NOLC1Q14978 699 aaKnown RBP eCLIP17.24■□□□□ 0.35
MSH5-206ENST00000423982 ZNF710Q8N1W2 664 aa17.24■□□□□ 0.35
MSH5-206ENST00000423982 ATP8B2P98198 1209 aa17.23■□□□□ 0.35
MSH5-206ENST00000423982 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
MSH5-206ENST00000423982 RASEFQ8IZ41 740 aa17.23■□□□□ 0.35
MSH5-206ENST00000423982 IFNL2Q8IZJ0 200 aa17.23■□□□□ 0.35
MSH5-206ENST00000423982 ABCC6O95255 1503 aa17.23■□□□□ 0.35
MSH5-206ENST00000423982 AP5Z1O43299 807 aa17.23■□□□□ 0.35
MSH5-206ENST00000423982 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
MSH5-206ENST00000423982 GIMAP6Q6P9H5 292 aa17.23■□□□□ 0.35
MSH5-206ENST00000423982 MYRIPQ8NFW9 859 aa17.23■□□□□ 0.35
MSH5-206ENST00000423982 LRP6O75581 1613 aa17.23■□□□□ 0.35
MSH5-206ENST00000423982 COL14A1Q05707 1796 aaKnown RBP17.22■□□□□ 0.35
MSH5-206ENST00000423982 BTBD11A6QL63 1104 aa17.22■□□□□ 0.35
MSH5-206ENST00000423982 NFATC2IPQ8NCF5 419 aa17.22■□□□□ 0.35
MSH5-206ENST00000423982 PIBF1Q8WXW3 757 aa17.22■□□□□ 0.35
MSH5-206ENST00000423982 HTATSF1O43719 755 aaKnown RBP17.22■□□□□ 0.35
MSH5-206ENST00000423982 PHF14O94880 888 aa17.22■□□□□ 0.35
MSH5-206ENST00000423982 HSPA4P34932 840 aa17.22■□□□□ 0.35
MSH5-206ENST00000423982 STK31Q9BXU1 1019 aa17.22■□□□□ 0.35
MSH5-206ENST00000423982 OVOS2A0A0G2JMS6 1433 aa17.21■□□□□ 0.35
MSH5-206ENST00000423982 LARGE1O95461 756 aa17.21■□□□□ 0.35
MSH5-206ENST00000423982 AK2P54819 239 aa17.21■□□□□ 0.35
MSH5-206ENST00000423982 KAT6BQ8WYB5 2073 aa17.21■□□□□ 0.35
MSH5-206ENST00000423982 SYT1P21579 422 aa17.21■□□□□ 0.35
MSH5-206ENST00000423982 CCDC183Q5T5S1 534 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms