RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 FAM157BP0CG42 384 aa7.32□□□□□ -1.24
HMGB3P23-201ENST00000414981 FGFR3P22607 806 aa7.32□□□□□ -1.24
HMGB3P23-201ENST00000414981 LAMC2Q13753 1193 aa7.32□□□□□ -1.24
HMGB3P23-201ENST00000414981 FAM182BQ5T319 152 aa7.32□□□□□ -1.24
HMGB3P23-201ENST00000414981 ALDH16A1Q8IZ83 802 aa7.32□□□□□ -1.24
HMGB3P23-201ENST00000414981 CHMP7Q8WUX9 453 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P23-201ENST00000414981 ABHD17AQ96GS6 310 aa7.32□□□□□ -1.24
HMGB3P23-201ENST00000414981 FOXO3O43524 673 aa7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 ARHGEF15O94989 841 aa7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 CELA2BP08218 269 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 MAPTP10636 758 aaKnown RBP7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 CTBSQ01459 385 aa7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 FAM69CQ0P6D2 419 aa7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 HIF1AQ16665 826 aa7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 LYPD4Q6UWN0 246 aa7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 CCDC82Q8N4S0 544 aa7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 RHPN1Q8TCX5 695 aa7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 WHAMMQ8TF30 809 aa7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 KLRG1Q96E93 195 aa7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 C1orf115Q9H7X2 142 aa7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 ZMIZ1Q9ULJ6 1067 aa7.31□□□□□ -1.24
HMGB3P23-201ENST00000414981 C2CD2LO14523 706 aa7.3□□□□□ -1.24
HMGB3P23-201ENST00000414981 PPP1R15AO75807 674 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P23-201ENST00000414981 LRRC69Q6ZNQ3 347 aa7.3□□□□□ -1.24
HMGB3P23-201ENST00000414981 ACDQ96AP0 544 aa7.3□□□□□ -1.24
HMGB3P23-201ENST00000414981 ENAMQ9NRM1 1142 aa7.3□□□□□ -1.24
HMGB3P23-201ENST00000414981 KHNYNO15037 678 aaKnown RBP7.29□□□□□ -1.24
HMGB3P23-201ENST00000414981 EFSO43281 561 aa7.29□□□□□ -1.24
HMGB3P23-201ENST00000414981 BCRP11274 1271 aa7.29□□□□□ -1.24
HMGB3P23-201ENST00000414981 BMP4P12644 408 aa7.29□□□□□ -1.24
HMGB3P23-201ENST00000414981 RTN1Q16799 776 aa7.29□□□□□ -1.24
HMGB3P23-201ENST00000414981 SVOPQ8N4V2 548 aa7.29□□□□□ -1.24
HMGB3P23-201ENST00000414981 SUSD3Q96L08 255 aa7.29□□□□□ -1.24
HMGB3P23-201ENST00000414981 MARK1Q9P0L2 795 aa7.29□□□□□ -1.24
HMGB3P23-201ENST00000414981 ADAMTS8Q9UP79 889 aa7.29□□□□□ -1.24
HMGB3P23-201ENST00000414981 LGR5O75473 907 aa7.28□□□□□ -1.24
HMGB3P23-201ENST00000414981 MAP3K10Q02779 954 aa7.28□□□□□ -1.24
HMGB3P23-201ENST00000414981 OXCT2Q9BYC2 517 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P23-201ENST00000414981 GDF2Q9UK05 429 aaPredicted RBP7.28□□□□□ -1.24
HMGB3P23-201ENST00000414981 HCN2Q9UL51 889 aa7.28□□□□□ -1.24
HMGB3P23-201ENST00000414981 STK32AQ8WU08 396 aa7.27□□□□□ -1.25
HMGB3P23-201ENST00000414981 VTI1AQ96AJ9 217 aa7.27□□□□□ -1.25
HMGB3P23-201ENST00000414981 AVENQ9NQS1 362 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P23-201ENST00000414981 DCDC2BA2VCK2 349 aa7.26□□□□□ -1.25
HMGB3P23-201ENST00000414981 OIP5O43482 229 aa7.26□□□□□ -1.25
HMGB3P23-201ENST00000414981 ARAFP10398 606 aa7.26□□□□□ -1.25
HMGB3P23-201ENST00000414981 KCNQ4P56696 695 aa7.26□□□□□ -1.25
HMGB3P23-201ENST00000414981 TMEM164Q5U3C3 297 aa7.26□□□□□ -1.25
HMGB3P23-201ENST00000414981 GOLGA6L1Q8N7Z2 621 aa7.26□□□□□ -1.25
HMGB3P23-201ENST00000414981 ZNF280CQ8ND82 737 aa7.26□□□□□ -1.25
HMGB3P23-201ENST00000414981 CLP1Q92989 425 aaKnown RBP7.26□□□□□ -1.25
HMGB3P23-201ENST00000414981 NGLY1Q96IV0 654 aa7.26□□□□□ -1.25
HMGB3P23-201ENST00000414981 CD33P20138 364 aa7.25□□□□□ -1.25
HMGB3P23-201ENST00000414981 OCLNQ16625 522 aa7.25□□□□□ -1.25
HMGB3P23-201ENST00000414981 IER5Q5VY09 327 aa7.25□□□□□ -1.25
HMGB3P23-201ENST00000414981 COL26A1Q96A83 441 aa7.25□□□□□ -1.25
HMGB3P23-201ENST00000414981 MYO19Q96H55 970 aa7.25□□□□□ -1.25
HMGB3P23-201ENST00000414981 PRIMPOLQ96LW4 560 aa7.25□□□□□ -1.25
HMGB3P23-201ENST00000414981 CEP63Q96MT8 703 aa7.25□□□□□ -1.25
HMGB3P23-201ENST00000414981 STRN4Q9NRL3 753 aa7.25□□□□□ -1.25
HMGB3P23-201ENST00000414981 C11orf91Q3C1V1 193 aa7.24□□□□□ -1.25
HMGB3P23-201ENST00000414981 GALNT6Q8NCL4 622 aa7.24□□□□□ -1.25
HMGB3P23-201ENST00000414981 PRMT3O60678 531 aa7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 MARSP56192 900 aaKnown RBP7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 TYRO3Q06418 890 aa7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 SFSWAPQ12872 951 aaKnown RBP7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 BTLAQ7Z6A9 289 aa7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 EDARADDQ8WWZ3 215 aa7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 HSH2DQ96JZ2 352 aa7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 QTRT2Q9H974 415 aaKnown RBP7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 BRD7Q9NPI1 651 aa7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 CXXC1Q9P0U4 656 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 DMGDHQ9UI17 866 aaKnown RBP7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 GGA1Q9UJY5 639 aa7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 PRR12Q9ULL5 1215 aa7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 KCNH4Q9UQ05 1017 aa7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 DNMT3AQ9Y6K1 912 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P23-201ENST00000414981 TGFBR3LH3BV60 316 aa7.22□□□□□ -1.25
HMGB3P23-201ENST00000414981 PTCD1O75127 700 aaKnown RBP7.22□□□□□ -1.25
HMGB3P23-201ENST00000414981 ADH6P28332 368 aa7.22□□□□□ -1.25
HMGB3P23-201ENST00000414981 FKBP5Q13451 457 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P23-201ENST00000414981 ZNF468Q5VIY5 522 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P23-201ENST00000414981 SLCO4C1Q6ZQN7 724 aa7.22□□□□□ -1.25
HMGB3P23-201ENST00000414981 C1orf229Q6ZS94 237 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P23-201ENST00000414981 SCARF2Q96GP6 870 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P23-201ENST00000414981 EFCC1Q9HA90 598 aa7.22□□□□□ -1.25
HMGB3P23-201ENST00000414981 C11orf16Q9NQ32 467 aa7.22□□□□□ -1.25
HMGB3P23-201ENST00000414981 KLF15Q9UIH9 416 aa7.22□□□□□ -1.25
HMGB3P23-201ENST00000414981 TIMELESSQ9UNS1 1208 aa7.22□□□□□ -1.25
HMGB3P23-201ENST00000414981 BCS1LQ9Y276 419 aa7.22□□□□□ -1.25
HMGB3P23-201ENST00000414981 KCNMA1Q12791 1236 aa7.21□□□□□ -1.26
HMGB3P23-201ENST00000414981 BEND7Q8N7W2 519 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P23-201ENST00000414981 NEDD1Q8NHV4 660 aa7.21□□□□□ -1.26
HMGB3P23-201ENST00000414981 NEURL1BA8MQ27 555 aa7.2□□□□□ -1.26
HMGB3P23-201ENST00000414981 EPXP11678 715 aa7.2□□□□□ -1.26
HMGB3P23-201ENST00000414981 DGKZQ13574 1117 aa7.2□□□□□ -1.26
HMGB3P23-201ENST00000414981 COX20Q5RI15 118 aa7.2□□□□□ -1.26
HMGB3P23-201ENST00000414981 BTBD6Q96KE9 485 aa7.2□□□□□ -1.26
HMGB3P23-201ENST00000414981 KLK14Q9P0G3 267 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms