RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 APAF1O14727 1248 aa20.48■□□□□ 0.87
MCF2L-211ENST00000413354 PDE6BP35913 854 aa20.48■□□□□ 0.87
MCF2L-211ENST00000413354 BRIP1Q9BX63 1249 aa20.48■□□□□ 0.87
MCF2L-211ENST00000413354 LAS1LQ9Y4W2 734 aaKnown RBP20.48■□□□□ 0.87
MCF2L-211ENST00000413354 ADCY9O60503 1353 aa20.47■□□□□ 0.87
MCF2L-211ENST00000413354 COL11A2P13942 1736 aaPredicted RBP20.47■□□□□ 0.87
MCF2L-211ENST00000413354 H0YIN7 160 aa20.47■□□□□ 0.87
MCF2L-211ENST00000413354 MYL6BP14649 208 aa20.47■□□□□ 0.87
MCF2L-211ENST00000413354 C2CD5Q86YS7 1000 aa20.47■□□□□ 0.87
MCF2L-211ENST00000413354 MAP3K15Q6ZN16 1313 aa20.47■□□□□ 0.87
MCF2L-211ENST00000413354 EIF2S2P20042 333 aaKnown RBP20.46■□□□□ 0.87
MCF2L-211ENST00000413354 ARHGAP27Q6ZUM4 889 aa20.46■□□□□ 0.87
MCF2L-211ENST00000413354 NBPF5PQ86XG9 351 aaPredicted RBP20.46■□□□□ 0.87
MCF2L-211ENST00000413354 NGEFQ8N5V2 710 aa20.46■□□□□ 0.87
MCF2L-211ENST00000413354 CFAP44Q96MT7 982 aa20.46■□□□□ 0.87
MCF2L-211ENST00000413354 MRS2Q9HD23 443 aa20.46■□□□□ 0.87
MCF2L-211ENST00000413354 NIP7Q9Y221 180 aaKnown RBP eCLIP20.46■□□□□ 0.87
MCF2L-211ENST00000413354 ATP10DQ9P241 1426 aa20.45■□□□□ 0.86
MCF2L-211ENST00000413354 HOXB7P09629 217 aa20.45■□□□□ 0.86
MCF2L-211ENST00000413354 ARFGEF2Q9Y6D5 1785 aa20.44■□□□□ 0.86
MCF2L-211ENST00000413354 CCDC184Q52MB2 194 aa20.44■□□□□ 0.86
MCF2L-211ENST00000413354 TTLL6Q8N841 843 aa20.44■□□□□ 0.86
MCF2L-211ENST00000413354 CACNA1SQ13698 1873 aa20.43■□□□□ 0.86
MCF2L-211ENST00000413354 HLFQ16534 295 aa20.43■□□□□ 0.86
MCF2L-211ENST00000413354 TPTE2Q6XPS3 522 aa20.43■□□□□ 0.86
MCF2L-211ENST00000413354 IFT57Q9NWB7 429 aa20.43■□□□□ 0.86
MCF2L-211ENST00000413354 ANKRD36CQ5JPF3 1778 aa20.42■□□□□ 0.86
MCF2L-211ENST00000413354 SBF1O95248 1867 aa20.42■□□□□ 0.86
MCF2L-211ENST00000413354 GNAI1P63096 354 aa20.42■□□□□ 0.86
MCF2L-211ENST00000413354 TTLL7Q6ZT98 887 aa20.42■□□□□ 0.86
MCF2L-211ENST00000413354 ZNF622Q969S3 477 aaKnown RBP eCLIP20.41■□□□□ 0.86
MCF2L-211ENST00000413354 NYXQ9GZU5 481 aa20.41■□□□□ 0.86
MCF2L-211ENST00000413354 IBTKQ9P2D0 1353 aaPredicted RBP20.41■□□□□ 0.86
MCF2L-211ENST00000413354 ZNF853P0CG23 659 aa20.4■□□□□ 0.86
MCF2L-211ENST00000413354 PDIA6Q15084 440 aa20.4■□□□□ 0.86
MCF2L-211ENST00000413354 CCDC24Q8N4L8 307 aa20.4■□□□□ 0.86
MCF2L-211ENST00000413354 ZBTB3Q9H5J0 574 aa20.4■□□□□ 0.86
MCF2L-211ENST00000413354 MBIPQ9NS73 344 aa20.4■□□□□ 0.86
MCF2L-211ENST00000413354 GTF2E1P29083 439 aaPredicted RBP20.39■□□□□ 0.85
MCF2L-211ENST00000413354 HDGFL1Q5TGJ6 251 aa20.39■□□□□ 0.85
MCF2L-211ENST00000413354 STYK1Q6J9G0 422 aa20.39■□□□□ 0.85
MCF2L-211ENST00000413354 GIGYF2Q6Y7W6 1299 aaKnown RBP20.39■□□□□ 0.85
MCF2L-211ENST00000413354 LRP10Q7Z4F1 713 aa20.39■□□□□ 0.85
MCF2L-211ENST00000413354 DDX21Q9NR30 783 aaKnown RBP eCLIP20.39■□□□□ 0.85
MCF2L-211ENST00000413354 CCDC27Q2M243 656 aa20.38■□□□□ 0.85
MCF2L-211ENST00000413354 KRT24Q2M2I5 525 aa20.38■□□□□ 0.85
MCF2L-211ENST00000413354 PROSER3Q2NL68 480 aa20.38■□□□□ 0.85
MCF2L-211ENST00000413354 NECTIN2Q92692 538 aa20.38■□□□□ 0.85
MCF2L-211ENST00000413354 CNKSR1Q969H4 720 aa20.38■□□□□ 0.85
MCF2L-211ENST00000413354 MASTLQ96GX5 879 aa20.38■□□□□ 0.85
MCF2L-211ENST00000413354 CCDC88AQ3V6T2 1871 aa20.37■□□□□ 0.85
MCF2L-211ENST00000413354 FAM177BA6PVY3 158 aa20.37■□□□□ 0.85
MCF2L-211ENST00000413354 SRGNP10124 158 aa20.37■□□□□ 0.85
MCF2L-211ENST00000413354 NCBP3Q53F19 620 aaKnown RBP20.37■□□□□ 0.85
MCF2L-211ENST00000413354 DUSP27Q5VZP5 1158 aa20.37■□□□□ 0.85
MCF2L-211ENST00000413354 GPBP1L1Q9HC44 474 aaPredicted RBP20.37■□□□□ 0.85
MCF2L-211ENST00000413354 ANXA1P04083 346 aa20.36■□□□□ 0.85
MCF2L-211ENST00000413354 PARP10Q53GL7 1025 aa20.36■□□□□ 0.85
MCF2L-211ENST00000413354 HSP90AB3PQ58FF7 597 aa20.36■□□□□ 0.85
MCF2L-211ENST00000413354 C9orf131Q5VYM1 1079 aa20.36■□□□□ 0.85
MCF2L-211ENST00000413354 CHMP4AQ9BY43 222 aa20.36■□□□□ 0.85
MCF2L-211ENST00000413354 DBF4Q9UBU7 674 aaPredicted RBP20.36■□□□□ 0.85
MCF2L-211ENST00000413354 FER1L6Q2WGJ9 1857 aa20.36■□□□□ 0.85
MCF2L-211ENST00000413354 SLX4Q8IY92 1834 aa20.36■□□□□ 0.85
MCF2L-211ENST00000413354 RIC1Q4ADV7 1423 aa20.36■□□□□ 0.85
MCF2L-211ENST00000413354 NPR1P16066 1061 aa20.35■□□□□ 0.85
MCF2L-211ENST00000413354 GPTP24298 496 aa20.35■□□□□ 0.85
MCF2L-211ENST00000413354 COPS6Q7L5N1 327 aa20.35■□□□□ 0.85
MCF2L-211ENST00000413354 ZNF34Q8IZ26 560 aa20.35■□□□□ 0.85
MCF2L-211ENST00000413354 XAGE3Q8WTP9 111 aa20.35■□□□□ 0.85
MCF2L-211ENST00000413354 CHPF2Q9P2E5 772 aa20.35■□□□□ 0.85
MCF2L-211ENST00000413354 TNRC6CQ9HCJ0 1690 aaKnown RBP20.35■□□□□ 0.85
MCF2L-211ENST00000413354 UBN2Q6ZU65 1347 aa20.34■□□□□ 0.85
MCF2L-211ENST00000413354 KLRG2A4D1S0 409 aaPredicted RBP20.34■□□□□ 0.85
MCF2L-211ENST00000413354 SOGA3Q5TF21 947 aa20.34■□□□□ 0.85
MCF2L-211ENST00000413354 PPP1R42Q7Z4L9 355 aa20.34■□□□□ 0.85
MCF2L-211ENST00000413354 RNF181Q9P0P0 153 aa20.34■□□□□ 0.85
MCF2L-211ENST00000413354 AIMP1Q12904 312 aaKnown RBP20.33■□□□□ 0.85
MCF2L-211ENST00000413354 HYPKQ9NX55 129 aa20.33■□□□□ 0.85
MCF2L-211ENST00000413354 DICER1Q9UPY3 1922 aaKnown RBP20.33■□□□□ 0.84
MCF2L-211ENST00000413354 ABCC12Q96J65 1359 aa20.33■□□□□ 0.84
MCF2L-211ENST00000413354 RNF123Q5XPI4 1314 aa20.32■□□□□ 0.84
MCF2L-211ENST00000413354 ZC3H4Q9UPT8 1303 aaKnown RBP20.32■□□□□ 0.84
MCF2L-211ENST00000413354 PRPF40BQ6NWY9 871 aaKnown RBP20.32■□□□□ 0.84
MCF2L-211ENST00000413354 ZNF526Q8TF50 670 aaPredicted RBP20.32■□□□□ 0.84
MCF2L-211ENST00000413354 TIAM2Q8IVF5 1701 aa20.32■□□□□ 0.84
MCF2L-211ENST00000413354 IL16Q14005 1332 aa20.31■□□□□ 0.84
MCF2L-211ENST00000413354 LMNB1P20700 586 aa20.31■□□□□ 0.84
MCF2L-211ENST00000413354 RASSF7Q02833 373 aa20.31■□□□□ 0.84
MCF2L-211ENST00000413354 SUSD4Q5VX71 490 aa20.31■□□□□ 0.84
MCF2L-211ENST00000413354 NUTM1Q86Y26 1132 aa20.31■□□□□ 0.84
MCF2L-211ENST00000413354 WWC1Q8IX03 1113 aa20.31■□□□□ 0.84
MCF2L-211ENST00000413354 C21orf2O43822 256 aa20.3■□□□□ 0.84
MCF2L-211ENST00000413354 NTSR2O95665 410 aa20.3■□□□□ 0.84
MCF2L-211ENST00000413354 ERFEQ4G0M1 354 aa20.3■□□□□ 0.84
MCF2L-211ENST00000413354 ALDH1B1P30837 517 aa20.29■□□□□ 0.84
MCF2L-211ENST00000413354 C1QTNF8P60827 252 aa20.29■□□□□ 0.84
MCF2L-211ENST00000413354 PLBD2Q8NHP8 589 aa20.29■□□□□ 0.84
MCF2L-211ENST00000413354 UTP14AQ9BVJ6 771 aaKnown RBP20.29■□□□□ 0.84
MCF2L-211ENST00000413354 LTBP3Q9NS15 1303 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms