RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 LMBRD1Q9NUN5 540 aa14.3□□□□□ -0.12
PCNX4-204ENST00000406949 MBD3O95983 291 aa14.3□□□□□ -0.12
PCNX4-204ENST00000406949 AXIN2Q9Y2T1 843 aa14.3□□□□□ -0.12
PCNX4-204ENST00000406949 CYP46A1Q9Y6A2 500 aa14.3□□□□□ -0.12
PCNX4-204ENST00000406949 WDR33Q9C0J8 1336 aaKnown RBP14.3□□□□□ -0.12
PCNX4-204ENST00000406949 SETD1AO15047 1707 aaKnown RBP14.29□□□□□ -0.12
PCNX4-204ENST00000406949 PDIA4P13667 645 aaKnown RBP14.29□□□□□ -0.12
PCNX4-204ENST00000406949 PRIM1P49642 420 aaKnown RBP14.29□□□□□ -0.12
PCNX4-204ENST00000406949 CCDC173Q0VFZ6 552 aa14.29□□□□□ -0.12
PCNX4-204ENST00000406949 PDRG1Q9NUG6 133 aa14.29□□□□□ -0.12
PCNX4-204ENST00000406949 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.29□□□□□ -0.12
PCNX4-204ENST00000406949 AK9Q5TCS8 1911 aa14.29□□□□□ -0.12
PCNX4-204ENST00000406949 SSH2Q76I76 1423 aa14.29□□□□□ -0.12
PCNX4-204ENST00000406949 ANKARQ7Z5J8 1434 aa14.29□□□□□ -0.12
PCNX4-204ENST00000406949 FOSBP53539 338 aa14.29□□□□□ -0.12
PCNX4-204ENST00000406949 ANAPC15P60006 121 aa14.29□□□□□ -0.12
PCNX4-204ENST00000406949 LARP1Q6PKG0 1096 aaKnown RBP14.29□□□□□ -0.12
PCNX4-204ENST00000406949 UBE3BQ7Z3V4 1068 aa14.29□□□□□ -0.12
PCNX4-204ENST00000406949 ARHGEF25Q86VW2 580 aa14.29□□□□□ -0.12
PCNX4-204ENST00000406949 NCOA3Q9Y6Q9 1424 aa14.29□□□□□ -0.12
PCNX4-204ENST00000406949 DNTTIP2Q5QJE6 756 aaKnown RBP14.29□□□□□ -0.12
PCNX4-204ENST00000406949 PEAK1Q9H792 1746 aa14.28□□□□□ -0.12
PCNX4-204ENST00000406949 SUCLG2Q96I99 432 aa14.28□□□□□ -0.12
PCNX4-204ENST00000406949 IL25Q9H293 177 aa14.28□□□□□ -0.12
PCNX4-204ENST00000406949 SGSM2O43147 1006 aa14.28□□□□□ -0.12
PCNX4-204ENST00000406949 AK2P54819 239 aa14.28□□□□□ -0.12
PCNX4-204ENST00000406949 LINS1Q8NG48 757 aa14.28□□□□□ -0.12
PCNX4-204ENST00000406949 STAP2Q9UGK3 403 aa14.28□□□□□ -0.12
PCNX4-204ENST00000406949 NRKQ7Z2Y5 1582 aa14.28□□□□□ -0.12
PCNX4-204ENST00000406949 FERMT3Q86UX7 667 aa14.28□□□□□ -0.12
PCNX4-204ENST00000406949 STRN4Q9NRL3 753 aa14.28□□□□□ -0.12
PCNX4-204ENST00000406949 ALDH1L1O75891 902 aa14.27□□□□□ -0.12
PCNX4-204ENST00000406949 HOXB7P09629 217 aa14.27□□□□□ -0.12
PCNX4-204ENST00000406949 NECAB1Q8N987 351 aa14.27□□□□□ -0.12
PCNX4-204ENST00000406949 LIMCH1Q9UPQ0 1083 aa14.27□□□□□ -0.12
PCNX4-204ENST00000406949 GORABQ5T7V8 394 aa14.27□□□□□ -0.13
PCNX4-204ENST00000406949 SNX14Q9Y5W7 946 aa14.27□□□□□ -0.13
PCNX4-204ENST00000406949 AKAP12Q02952 1782 aa14.27□□□□□ -0.13
PCNX4-204ENST00000406949 RNF20Q5VTR2 975 aa14.27□□□□□ -0.13
PCNX4-204ENST00000406949 ZNF790Q6PG37 636 aa14.27□□□□□ -0.13
PCNX4-204ENST00000406949 TOM1L2Q6ZVM7 507 aa14.27□□□□□ -0.13
PCNX4-204ENST00000406949 NDUFB9Q9Y6M9 179 aa14.27□□□□□ -0.13
PCNX4-204ENST00000406949 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.26□□□□□ -0.13
PCNX4-204ENST00000406949 PHF14O94880 888 aa14.26□□□□□ -0.13
PCNX4-204ENST00000406949 RASEFQ8IZ41 740 aa14.26□□□□□ -0.13
PCNX4-204ENST00000406949 CCDC85AQ96PX6 553 aaPredicted RBP14.26□□□□□ -0.13
PCNX4-204ENST00000406949 BCL11BQ9C0K0 894 aaPredicted RBP14.26□□□□□ -0.13
PCNX4-204ENST00000406949 DDX21Q9NR30 783 aaKnown RBP eCLIP14.26□□□□□ -0.13
PCNX4-204ENST00000406949 ATP6V1DQ9Y5K8 247 aa14.26□□□□□ -0.13
PCNX4-204ENST00000406949 A0A087WZG4 1122 aa14.26□□□□□ -0.13
PCNX4-204ENST00000406949 PRDM11Q9NQV5 511 aa14.26□□□□□ -0.13
PCNX4-204ENST00000406949 ANKRD13DQ6ZTN6 518 aa14.25□□□□□ -0.13
PCNX4-204ENST00000406949 GPT2Q8TD30 523 aa14.25□□□□□ -0.13
PCNX4-204ENST00000406949 FAM227BQ96M60 508 aa14.25□□□□□ -0.13
PCNX4-204ENST00000406949 RAD50Q92878 1312 aa14.25□□□□□ -0.13
PCNX4-204ENST00000406949 HSPA4P34932 840 aa14.25□□□□□ -0.13
PCNX4-204ENST00000406949 TAF7LQ5H9L4 462 aa14.25□□□□□ -0.13
PCNX4-204ENST00000406949 IFNL2Q8IZJ0 200 aa14.25□□□□□ -0.13
PCNX4-204ENST00000406949 PI4K2BQ8TCG2 481 aa14.25□□□□□ -0.13
PCNX4-204ENST00000406949 EVI5LQ96CN4 794 aa14.25□□□□□ -0.13
PCNX4-204ENST00000406949 ZNF496Q96IT1 587 aaPredicted RBP14.25□□□□□ -0.13
PCNX4-204ENST00000406949 EDC3Q96F86 508 aaKnown RBP14.25□□□□□ -0.13
PCNX4-204ENST00000406949 RBSNQ9H1K0 784 aa14.25□□□□□ -0.13
PCNX4-204ENST00000406949 TSPY26PQ9H489 355 aa14.25□□□□□ -0.13
PCNX4-204ENST00000406949 CNPY2Q9Y2B0 182 aa14.25□□□□□ -0.13
PCNX4-204ENST00000406949 ZDHHC9Q9Y397 364 aa14.25□□□□□ -0.13
PCNX4-204ENST00000406949 KNDC1Q76NI1 1749 aa14.25□□□□□ -0.13
PCNX4-204ENST00000406949 PTH1RQ03431 593 aa14.24□□□□□ -0.13
PCNX4-204ENST00000406949 NMIQ13287 307 aaPredicted RBP14.24□□□□□ -0.13
PCNX4-204ENST00000406949 C19orf44Q9H6X5 657 aa14.24□□□□□ -0.13
PCNX4-204ENST00000406949 TMEM63CQ9P1W3 806 aa14.24□□□□□ -0.13
PCNX4-204ENST00000406949 RBM8AQ9Y5S9 174 aaKnown RBP14.24□□□□□ -0.13
PCNX4-204ENST00000406949 EVA1CP58658 441 aa14.24□□□□□ -0.13
PCNX4-204ENST00000406949 POLA2Q14181 598 aa14.24□□□□□ -0.13
PCNX4-204ENST00000406949 NSFL1CQ9UNZ2 370 aaKnown RBP14.24□□□□□ -0.13
PCNX4-204ENST00000406949 BLOC1S2Q6QNY1 142 aa14.24□□□□□ -0.13
PCNX4-204ENST00000406949 USP48Q86UV5 1035 aa14.24□□□□□ -0.13
PCNX4-204ENST00000406949 STX6O43752 255 aa14.23□□□□□ -0.13
PCNX4-204ENST00000406949 GJB2P29033 226 aa14.23□□□□□ -0.13
PCNX4-204ENST00000406949 USP16Q9Y5T5 823 aa14.23□□□□□ -0.13
PCNX4-204ENST00000406949 AOX1Q06278 1338 aa14.23□□□□□ -0.13
PCNX4-204ENST00000406949 TTC41PQ6P2S7 1318 aa14.23□□□□□ -0.13
PCNX4-204ENST00000406949 RGPD8O14715 1765 aaPredicted RBP14.23□□□□□ -0.13
PCNX4-204ENST00000406949 EAF2Q96CJ1 260 aaPredicted RBP14.23□□□□□ -0.13
PCNX4-204ENST00000406949 ZBTB3Q9H5J0 574 aa14.23□□□□□ -0.13
PCNX4-204ENST00000406949 TLR7Q9NYK1 1049 aaKnown RBP14.23□□□□□ -0.13
PCNX4-204ENST00000406949 HIP1O00291 1037 aa14.23□□□□□ -0.13
PCNX4-204ENST00000406949 LARP1BQ659C4 914 aaKnown RBP14.23□□□□□ -0.13
PCNX4-204ENST00000406949 FMNL2Q96PY5 1086 aa14.23□□□□□ -0.13
PCNX4-204ENST00000406949 ADCY9O60503 1353 aa14.22□□□□□ -0.13
PCNX4-204ENST00000406949 GADD45BO75293 160 aaPredicted RBP14.22□□□□□ -0.13
PCNX4-204ENST00000406949 SNRPA1P09661 255 aaKnown RBP14.22□□□□□ -0.13
PCNX4-204ENST00000406949 PSMA5P28066 241 aa14.22□□□□□ -0.13
PCNX4-204ENST00000406949 KIF13AQ9H1H9 1805 aa14.22□□□□□ -0.13
PCNX4-204ENST00000406949 BRD1O95696 1058 aa14.22□□□□□ -0.13
PCNX4-204ENST00000406949 INTS4Q96HW7 963 aaKnown RBP14.22□□□□□ -0.13
PCNX4-204ENST00000406949 H3BQV1 296 aa14.21□□□□□ -0.13
PCNX4-204ENST00000406949 PPFIA3O75145 1194 aa14.21□□□□□ -0.13
PCNX4-204ENST00000406949 IFFO2Q5TF58 517 aa14.21□□□□□ -0.13
PCNX4-204ENST00000406949 DDX46Q7L014 1031 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms