RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 TMCC3Q9ULS5 477 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 ATAD2BQ9ULI0 1458 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 FCHSD2O94868 740 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 MYL3P08590 195 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 ZNF132P52740 706 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 L3MBTL3Q96JM7 780 aaPredicted RBP6.87□□□□□ -1.31
CNGA1-202ENST00000402813 DNAJC25Q9H1X3 360 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 HOMER2Q9NSB8 354 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 TMEM63CQ9P1W3 806 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 PGAP2Q9UHJ9 254 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 IPO5O00410 1097 aaKnown RBP6.87□□□□□ -1.31
CNGA1-202ENST00000402813 GPR37L1O60883 481 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 HNRNPCP07910 306 aaKnown RBP eCLIP6.87□□□□□ -1.31
CNGA1-202ENST00000402813 TNNT2P45379 298 aaPredicted RBP6.87□□□□□ -1.31
CNGA1-202ENST00000402813 MIGA1Q8NAN2 632 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 RNF217Q8TC41 542 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 PARP2Q9UGN5 583 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.87□□□□□ -1.31
CNGA1-202ENST00000402813 WDR97A6NE52 1622 aa6.86□□□□□ -1.31
CNGA1-202ENST00000402813 PPP1R3GB7ZBB8 358 aa6.86□□□□□ -1.31
CNGA1-202ENST00000402813 PRRT4C9JH25 899 aa6.86□□□□□ -1.31
CNGA1-202ENST00000402813 SLC26A4O43511 780 aa6.86□□□□□ -1.31
CNGA1-202ENST00000402813 NR1I2O75469 434 aa6.86□□□□□ -1.31
CNGA1-202ENST00000402813 DUSP27Q5VZP5 1158 aa6.86□□□□□ -1.31
CNGA1-202ENST00000402813 NOVA2Q9UNW9 492 aaKnown RBP6.86□□□□□ -1.31
CNGA1-202ENST00000402813 RABGAP1Q9Y3P9 1069 aa6.86□□□□□ -1.31
CNGA1-202ENST00000402813 GJA3Q9Y6H8 435 aa6.86□□□□□ -1.31
CNGA1-202ENST00000402813 CLIP1P30622 1438 aa6.86□□□□□ -1.31
CNGA1-202ENST00000402813 GOLGA6L6A8MZA4 724 aa6.86□□□□□ -1.31
CNGA1-202ENST00000402813 GRAMD1BQ3KR37 738 aa6.86□□□□□ -1.31
CNGA1-202ENST00000402813 LCA5Q86VQ0 697 aa6.86□□□□□ -1.31
CNGA1-202ENST00000402813 C22orf23Q9BZE7 217 aa6.86□□□□□ -1.31
CNGA1-202ENST00000402813 CHMP3Q9Y3E7 222 aa6.86□□□□□ -1.31
CNGA1-202ENST00000402813 PRSS47A8MTI9 375 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 C11orf95C9JLR9 678 aaPredicted RBP6.85□□□□□ -1.31
CNGA1-202ENST00000402813 LILRB3O75022 631 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 TCEA3O75764 348 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 FGRP09769 529 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 NAT2P11245 290 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 PSMA3P25788 255 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 SEPT2Q15019 361 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 ALFQ53S48 1182 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 DIEXFQ68CQ4 756 aaKnown RBP6.85□□□□□ -1.31
CNGA1-202ENST00000402813 PPP4R4Q6NUP7 873 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 TTC30AQ86WT1 665 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 CLP1Q92989 425 aaKnown RBP6.85□□□□□ -1.31
CNGA1-202ENST00000402813 EGFL7Q9UHF1 273 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 NDUFB9Q9Y6M9 179 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 CC2D2AQ9P2K1 1620 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 ORC4O43929 436 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 MAPK1P28482 360 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 FAM69CQ0P6D2 419 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 MORC3Q14149 939 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 SMARCC1Q92922 1105 aaPredicted RBP6.85□□□□□ -1.31
CNGA1-202ENST00000402813 E2F7Q96AV8 911 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 GJD4Q96KN9 370 aaPredicted RBP6.85□□□□□ -1.31
CNGA1-202ENST00000402813 PPCSQ9HAB8 311 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 FBXO2Q9UK22 296 aaPredicted RBP6.85□□□□□ -1.31
CNGA1-202ENST00000402813 HDAC9Q9UKV0 1011 aa6.85□□□□□ -1.31
CNGA1-202ENST00000402813 PIK3CAP42336 1068 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 SEC13P55735 322 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 GPSM2P81274 684 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 Q3C1V9 767 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 HDGFL2Q7Z4V5 671 aaPredicted RBP6.84□□□□□ -1.31
CNGA1-202ENST00000402813 ACRBPQ8NEB7 543 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 PDGFDQ9GZP0 370 aaPredicted RBP6.84□□□□□ -1.31
CNGA1-202ENST00000402813 SLKQ9H2G2 1235 aaPredicted RBP6.84□□□□□ -1.31
CNGA1-202ENST00000402813 CD248Q9HCU0 757 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 PTPRHQ9HD43 1115 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 GRXCR2A6NFK2 248 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 PPFIA3O75145 1194 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 RGS3P49796 1198 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 FAM133BQ5BKY9 247 aaKnown RBP6.84□□□□□ -1.31
CNGA1-202ENST00000402813 HYIQ5T013 277 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 TBC1D9Q6ZT07 1266 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 PRR7Q8TB68 274 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 HELQQ8TDG4 1101 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 KMT5AQ9NQR1 393 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 MAFFQ9ULX9 164 aa6.84□□□□□ -1.31
CNGA1-202ENST00000402813 RPL17P18621 184 aaKnown RBP6.83□□□□□ -1.32
CNGA1-202ENST00000402813 HOXC13P31276 330 aa6.83□□□□□ -1.32
CNGA1-202ENST00000402813 TRPC1P48995 793 aa6.83□□□□□ -1.32
CNGA1-202ENST00000402813 HMGN5P82970 282 aaKnown RBP6.83□□□□□ -1.32
CNGA1-202ENST00000402813 VAC14Q08AM6 782 aa6.83□□□□□ -1.32
CNGA1-202ENST00000402813 ERAP2Q6P179 960 aa6.83□□□□□ -1.32
CNGA1-202ENST00000402813 PDXDC2PQ6P474 469 aa6.83□□□□□ -1.32
CNGA1-202ENST00000402813 ZSCAN29Q8IWY8 852 aaPredicted RBP6.83□□□□□ -1.32
CNGA1-202ENST00000402813 NGEFQ8N5V2 710 aa6.83□□□□□ -1.32
CNGA1-202ENST00000402813 AKT1S1Q96B36 256 aa6.83□□□□□ -1.32
CNGA1-202ENST00000402813 PAWRQ96IZ0 340 aaKnown RBP6.83□□□□□ -1.32
CNGA1-202ENST00000402813 SRRTQ9BXP5 876 aaKnown RBP6.83□□□□□ -1.32
CNGA1-202ENST00000402813 NBPF3Q9H094 633 aa6.83□□□□□ -1.32
CNGA1-202ENST00000402813 DCTN4Q9UJW0 460 aa6.83□□□□□ -1.32
CNGA1-202ENST00000402813 AKNAQ7Z591 1439 aa6.83□□□□□ -1.32
CNGA1-202ENST00000402813 RAD54L2Q9Y4B4 1467 aa6.83□□□□□ -1.32
CNGA1-202ENST00000402813 PES1O00541 588 aaKnown RBP6.83□□□□□ -1.32
CNGA1-202ENST00000402813 DPYSL4O14531 572 aa6.83□□□□□ -1.32
CNGA1-202ENST00000402813 GEMIN4P57678 1058 aaKnown RBP6.83□□□□□ -1.32
CNGA1-202ENST00000402813 BRDTQ58F21 947 aaPredicted RBP6.83□□□□□ -1.32
CNGA1-202ENST00000402813 ARMC3Q5W041 872 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms