RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 C1orf141Q5JVX7 400 aa17.01■□□□□ 0.31
ATG3-202ENST00000402314 ARHGEF25Q86VW2 580 aa17.01■□□□□ 0.31
ATG3-202ENST00000402314 AKAP4Q5JQC9 854 aa17■□□□□ 0.31
ATG3-202ENST00000402314 TSPY26PQ9H489 355 aa17■□□□□ 0.31
ATG3-202ENST00000402314 RGPD2P0DJD1 1756 aa17■□□□□ 0.31
ATG3-202ENST00000402314 KCNH5Q8NCM2 988 aa17■□□□□ 0.31
ATG3-202ENST00000402314 PI4K2BQ8TCG2 481 aa17■□□□□ 0.31
ATG3-202ENST00000402314 SPG7Q9UQ90 795 aa17■□□□□ 0.31
ATG3-202ENST00000402314 LTN1O94822 1766 aa17■□□□□ 0.31
ATG3-202ENST00000402314 TERF1P54274 439 aa16.99■□□□□ 0.31
ATG3-202ENST00000402314 POLA2Q14181 598 aa16.99■□□□□ 0.31
ATG3-202ENST00000402314 PPP4R3BQ5MIZ7 849 aa16.99■□□□□ 0.31
ATG3-202ENST00000402314 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.99■□□□□ 0.31
ATG3-202ENST00000402314 CPA1P15085 419 aa16.99■□□□□ 0.31
ATG3-202ENST00000402314 CWC27Q6UX04 472 aaKnown RBP16.99■□□□□ 0.31
ATG3-202ENST00000402314 ZNF710Q8N1W2 664 aa16.99■□□□□ 0.31
ATG3-202ENST00000402314 DDX54Q8TDD1 881 aaKnown RBP16.99■□□□□ 0.31
ATG3-202ENST00000402314 BABAM1Q9NWV8 329 aa16.99■□□□□ 0.31
ATG3-202ENST00000402314 ATP2B3Q16720 1220 aa16.99■□□□□ 0.31
ATG3-202ENST00000402314 C9orf78Q9NZ63 289 aaPredicted RBP16.99■□□□□ 0.31
ATG3-202ENST00000402314 NFAT5O94916 1531 aa16.99■□□□□ 0.31
ATG3-202ENST00000402314 GIGYF1O75420 1035 aaPredicted RBP16.98■□□□□ 0.31
ATG3-202ENST00000402314 SMAP1Q8IYB5 467 aaPredicted RBP16.98■□□□□ 0.31
ATG3-202ENST00000402314 CCDC94Q9BW85 323 aaPredicted RBP16.98■□□□□ 0.31
ATG3-202ENST00000402314 SPC24Q8NBT2 197 aa16.97■□□□□ 0.31
ATG3-202ENST00000402314 HCLS1P14317 486 aaPredicted RBP16.97■□□□□ 0.31
ATG3-202ENST00000402314 KRT28Q7Z3Y7 464 aa16.97■□□□□ 0.31
ATG3-202ENST00000402314 CABLES1Q8TDN4 633 aa16.97■□□□□ 0.31
ATG3-202ENST00000402314 MCCP23508 829 aa16.96■□□□□ 0.31
ATG3-202ENST00000402314 RASEFQ8IZ41 740 aa16.96■□□□□ 0.31
ATG3-202ENST00000402314 KIF1BPQ96EK5 621 aa16.96■□□□□ 0.31
ATG3-202ENST00000402314 CWC22Q9HCG8 908 aaKnown RBP16.96■□□□□ 0.31
ATG3-202ENST00000402314 DBF4Q9UBU7 674 aaPredicted RBP16.96■□□□□ 0.31
ATG3-202ENST00000402314 MYL6BP14649 208 aa16.96■□□□□ 0.31
ATG3-202ENST00000402314 NOLC1Q14978 699 aaKnown RBP eCLIP16.96■□□□□ 0.31
ATG3-202ENST00000402314 PROSER2Q86WR7 435 aaPredicted RBP16.96■□□□□ 0.31
ATG3-202ENST00000402314 KLHDC4Q8TBB5 520 aa16.96■□□□□ 0.31
ATG3-202ENST00000402314 ADGRL3Q9HAR2 1447 aa16.96■□□□□ 0.31
ATG3-202ENST00000402314 ZSCAN20P17040 1043 aaPredicted RBP16.96■□□□□ 0.3
ATG3-202ENST00000402314 CHMP3Q9Y3E7 222 aa16.96■□□□□ 0.3
ATG3-202ENST00000402314 SIL1Q9H173 461 aa16.95■□□□□ 0.3
ATG3-202ENST00000402314 NLRP2Q9NX02 1062 aa16.95■□□□□ 0.3
ATG3-202ENST00000402314 RAB11FIP3O75154 756 aa16.94■□□□□ 0.3
ATG3-202ENST00000402314 ADCY5O95622 1261 aa16.94■□□□□ 0.3
ATG3-202ENST00000402314 USP48Q86UV5 1035 aa16.94■□□□□ 0.3
ATG3-202ENST00000402314 MYRIPQ8NFW9 859 aa16.94■□□□□ 0.3
ATG3-202ENST00000402314 CHRNA2Q15822 529 aa16.93■□□□□ 0.3
ATG3-202ENST00000402314 SGSM2O43147 1006 aa16.93■□□□□ 0.3
ATG3-202ENST00000402314 AMOTQ4VCS5 1084 aa16.93■□□□□ 0.3
ATG3-202ENST00000402314 SUCLG2Q96I99 432 aa16.93■□□□□ 0.3
ATG3-202ENST00000402314 KSR2Q6VAB6 950 aa16.92■□□□□ 0.3
ATG3-202ENST00000402314 KAZALD1Q96I82 304 aa16.92■□□□□ 0.3
ATG3-202ENST00000402314 CCDC8Q9H0W5 538 aaPredicted RBP16.92■□□□□ 0.3
ATG3-202ENST00000402314 CHD2O14647 1828 aaKnown RBP16.92■□□□□ 0.3
ATG3-202ENST00000402314 U2AF2P26368 475 aaKnown RBP eCLIP16.92■□□□□ 0.33e-9■■■■■ 27.2
ATG3-202ENST00000402314 HSPA4P34932 840 aa16.92■□□□□ 0.3
ATG3-202ENST00000402314 NFATC2IPQ8NCF5 419 aa16.92■□□□□ 0.3
ATG3-202ENST00000402314 PXDNLA1KZ92 1463 aa16.92■□□□□ 0.3
ATG3-202ENST00000402314 COL9A3Q14050 684 aaPredicted RBP16.91■□□□□ 0.3
ATG3-202ENST00000402314 SNX14Q9Y5W7 946 aa16.91■□□□□ 0.3
ATG3-202ENST00000402314 HOXB7P09629 217 aa16.91■□□□□ 0.3
ATG3-202ENST00000402314 PTH1RQ03431 593 aa16.91■□□□□ 0.3
ATG3-202ENST00000402314 BICC1Q9H694 974 aaKnown RBP16.91■□□□□ 0.3
ATG3-202ENST00000402314 MBD3O95983 291 aa16.91■□□□□ 0.3
ATG3-202ENST00000402314 MCM5P33992 734 aa16.91■□□□□ 0.3
ATG3-202ENST00000402314 DMTNQ08495 405 aa16.91■□□□□ 0.3
ATG3-202ENST00000402314 AACSQ86V21 672 aa16.91■□□□□ 0.3
ATG3-202ENST00000402314 CNTROBQ8N137 903 aa16.91■□□□□ 0.3
ATG3-202ENST00000402314 LSG1Q9H089 658 aaKnown RBP16.91■□□□□ 0.3
ATG3-202ENST00000402314 TLR7Q9NYK1 1049 aaKnown RBP16.91■□□□□ 0.3
ATG3-202ENST00000402314 CNPY2Q9Y2B0 182 aa16.91■□□□□ 0.3
ATG3-202ENST00000402314 FIBPO43427 364 aa16.9■□□□□ 0.3
ATG3-202ENST00000402314 CUL4AQ13619 759 aa16.9■□□□□ 0.3
ATG3-202ENST00000402314 MTERF4Q7Z6M4 381 aaKnown RBP16.9■□□□□ 0.3
ATG3-202ENST00000402314 CLASRPQ8N2M8 674 aaKnown RBP16.9■□□□□ 0.3
ATG3-202ENST00000402314 BCL2L12Q9HB09 334 aa16.9■□□□□ 0.3
ATG3-202ENST00000402314 GIMAP6Q6P9H5 292 aa16.9■□□□□ 0.3
ATG3-202ENST00000402314 KIF3AQ9Y496 699 aa16.9■□□□□ 0.3
ATG3-202ENST00000402314 ANAPC15P60006 121 aa16.89■□□□□ 0.29
ATG3-202ENST00000402314 PDIA6Q15084 440 aa16.89■□□□□ 0.29
ATG3-202ENST00000402314 CACNA1FO60840 1977 aa16.89■□□□□ 0.29
ATG3-202ENST00000402314 BRD1O95696 1058 aa16.89■□□□□ 0.29
ATG3-202ENST00000402314 RAD50Q92878 1312 aa16.89■□□□□ 0.29
ATG3-202ENST00000402314 IGKV5-2P06315 115 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 IFIT2P09913 472 aaKnown RBP16.88■□□□□ 0.29
ATG3-202ENST00000402314 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
ATG3-202ENST00000402314 ADCK5Q3MIX3 580 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 RIC3Q7Z5B4 369 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 DIAPH3Q9NSV4 1193 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 NPHP4O75161 1426 aaPredicted RBP16.88■□□□□ 0.29
ATG3-202ENST00000402314 MED1Q15648 1581 aaPredicted RBP16.88■□□□□ 0.29
ATG3-202ENST00000402314 GRM8O00222 908 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 SASH1O94885 1247 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 CSB-PGBD3P0DP91 1061 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 AK2P54819 239 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 EPHA10Q5JZY3 1008 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 EAF2Q96CJ1 260 aaPredicted RBP16.88■□□□□ 0.29
ATG3-202ENST00000402314 ERBB3P21860 1342 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 AOX1Q06278 1338 aa16.88■□□□□ 0.29
ATG3-202ENST00000402314 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms