RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 SNAPC4Q5SXM2 1469 aa9.74□□□□□ -0.85
CSNK2A1-204ENST00000400227 LGR5O75473 907 aa9.73□□□□□ -0.85
CSNK2A1-204ENST00000400227 SCG3Q8WXD2 468 aaKnown RBP9.73□□□□□ -0.85
CSNK2A1-204ENST00000400227 ZNF775Q96BV0 537 aaPredicted RBP9.73□□□□□ -0.85
CSNK2A1-204ENST00000400227 ATAD2Q6PL18 1390 aa9.73□□□□□ -0.85
CSNK2A1-204ENST00000400227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.73□□□□□ -0.85
CSNK2A1-204ENST00000400227 PDS5BQ9NTI5 1447 aa9.73□□□□□ -0.85
CSNK2A1-204ENST00000400227 GAPVD1Q14C86 1478 aa9.73□□□□□ -0.85
CSNK2A1-204ENST00000400227 TARBP1Q13395 1621 aaKnown RBP9.73□□□□□ -0.85
CSNK2A1-204ENST00000400227 H3BM21 787 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 ITGA6P23229 1130 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 WEE1P30291 646 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 NOS2P35228 1153 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 POTEAQ6S8J7 498 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 L3MBTL2Q969R5 705 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 SERTM1A2A2V5 107 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 PPP1R12BO60237 982 aaPredicted RBP9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 F11P03951 625 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 CSB-PGBD3P0DP91 1061 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 IGFBP4P22692 258 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 ITGAEP38570 1179 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 VEGFBP49765 207 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 STAG2Q8N3U4 1231 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 GAS2L1Q99501 681 aaPredicted RBP9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 CHMP3Q9Y3E7 222 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 PARP3Q9Y6F1 533 aa9.72□□□□□ -0.85
CSNK2A1-204ENST00000400227 FMN1Q68DA7 1419 aa9.71□□□□□ -0.85
CSNK2A1-204ENST00000400227 EML1O00423 815 aa9.71□□□□□ -0.86
CSNK2A1-204ENST00000400227 MSX1P28360 303 aa9.71□□□□□ -0.86
CSNK2A1-204ENST00000400227 NBPF1Q3BBV0 1214 aa9.71□□□□□ -0.86
CSNK2A1-204ENST00000400227 TMEM88BA6NKF7 163 aa9.7□□□□□ -0.86
CSNK2A1-204ENST00000400227 HIRAP54198 1017 aaPredicted RBP9.7□□□□□ -0.86
CSNK2A1-204ENST00000400227 PBRM1Q86U86 1689 aa9.7□□□□□ -0.86
CSNK2A1-204ENST00000400227 TDRD9Q8NDG6 1382 aaKnown RBP9.7□□□□□ -0.86
CSNK2A1-204ENST00000400227 THOC2Q8NI27 1593 aaKnown RBP9.7□□□□□ -0.86
CSNK2A1-204ENST00000400227 C1orf216Q8TAB5 229 aa9.7□□□□□ -0.86
CSNK2A1-204ENST00000400227 CLP1Q92989 425 aaKnown RBP9.7□□□□□ -0.86
CSNK2A1-204ENST00000400227 AIDAQ96BJ3 306 aa9.7□□□□□ -0.86
CSNK2A1-204ENST00000400227 C2orf49Q9BVC5 232 aaPredicted RBP9.7□□□□□ -0.86
CSNK2A1-204ENST00000400227 ZDHHC3Q9NYG2 299 aa9.7□□□□□ -0.86
CSNK2A1-204ENST00000400227 ZNF232Q9UNY5 417 aa9.7□□□□□ -0.86
CSNK2A1-204ENST00000400227 GRIN2BQ13224 1484 aa9.69□□□□□ -0.86
CSNK2A1-204ENST00000400227 NFX1Q12986 1120 aaKnown RBP9.69□□□□□ -0.86
CSNK2A1-204ENST00000400227 SH3PXD2AQ5TCZ1 1133 aa9.69□□□□□ -0.86
CSNK2A1-204ENST00000400227 SLC16A10Q8TF71 515 aa9.69□□□□□ -0.86
CSNK2A1-204ENST00000400227 CUEDC1Q9NWM3 386 aaPredicted RBP9.69□□□□□ -0.86
CSNK2A1-204ENST00000400227 ATP4AP20648 1035 aa9.68□□□□□ -0.86
CSNK2A1-204ENST00000400227 OCLNQ16625 522 aa9.68□□□□□ -0.86
CSNK2A1-204ENST00000400227 RIPOR1Q6ZS17 1223 aa9.68□□□□□ -0.86
CSNK2A1-204ENST00000400227 CHMP7Q8WUX9 453 aaPredicted RBP9.68□□□□□ -0.86
CSNK2A1-204ENST00000400227 NANOS1Q8WY41 292 aaKnown RBP9.68□□□□□ -0.86
CSNK2A1-204ENST00000400227 GPAMQ9HCL2 828 aa9.68□□□□□ -0.86
CSNK2A1-204ENST00000400227 FOXO3O43524 673 aa9.67□□□□□ -0.86
CSNK2A1-204ENST00000400227 PRMT3O60678 531 aa9.67□□□□□ -0.86
CSNK2A1-204ENST00000400227 TATP17735 454 aaPredicted RBP9.67□□□□□ -0.86
CSNK2A1-204ENST00000400227 TXLNAP40222 546 aa9.67□□□□□ -0.86
CSNK2A1-204ENST00000400227 FAM50AQ14320 339 aaKnown RBP9.67□□□□□ -0.86
CSNK2A1-204ENST00000400227 TRIM22Q8IYM9 498 aa9.67□□□□□ -0.86
CSNK2A1-204ENST00000400227 GMCL1Q96IK5 515 aa9.67□□□□□ -0.86
CSNK2A1-204ENST00000400227 PRIMPOLQ96LW4 560 aa9.67□□□□□ -0.86
CSNK2A1-204ENST00000400227 SLAIN2Q9P270 581 aa9.67□□□□□ -0.86
CSNK2A1-204ENST00000400227 FGD6Q6ZV73 1430 aa9.67□□□□□ -0.86
CSNK2A1-204ENST00000400227 H7C1W4 665 aa9.66□□□□□ -0.86
CSNK2A1-204ENST00000400227 YTHDC1Q96MU7 727 aaKnown RBP9.66□□□□□ -0.86
CSNK2A1-204ENST00000400227 CRISPLD1Q9H336 500 aa9.66□□□□□ -0.86
CSNK2A1-204ENST00000400227 USTQ9Y2C2 406 aa9.66□□□□□ -0.86
CSNK2A1-204ENST00000400227 VSIG8P0DPA2 414 aa9.66□□□□□ -0.86
CSNK2A1-204ENST00000400227 DBN1Q16643 649 aa9.66□□□□□ -0.86
CSNK2A1-204ENST00000400227 PGBD3Q8N328 593 aa9.66□□□□□ -0.86
CSNK2A1-204ENST00000400227 RUBCNLQ9H714 662 aa9.66□□□□□ -0.86
CSNK2A1-204ENST00000400227 SUPT6HQ7KZ85 1726 aaKnown RBP9.65□□□□□ -0.86
CSNK2A1-204ENST00000400227 WFS1O76024 890 aa9.65□□□□□ -0.87
CSNK2A1-204ENST00000400227 LBRQ14739 615 aaKnown RBP9.65□□□□□ -0.87
CSNK2A1-204ENST00000400227 C1orf53Q5VUE5 145 aa9.65□□□□□ -0.87
CSNK2A1-204ENST00000400227 RETREG2Q8NC44 543 aa9.65□□□□□ -0.87
CSNK2A1-204ENST00000400227 ZNF837Q96EG3 531 aaPredicted RBP9.65□□□□□ -0.87
CSNK2A1-204ENST00000400227 CXXC1Q9P0U4 656 aaPredicted RBP9.65□□□□□ -0.87
CSNK2A1-204ENST00000400227 HCN4Q9Y3Q4 1203 aa9.65□□□□□ -0.87
CSNK2A1-204ENST00000400227 ADAMTS12P58397 1594 aa9.64□□□□□ -0.87
CSNK2A1-204ENST00000400227 ARHGEF11O15085 1522 aa9.64□□□□□ -0.87
CSNK2A1-204ENST00000400227 EHBP1L1Q8N3D4 1523 aa9.64□□□□□ -0.87
CSNK2A1-204ENST00000400227 CDC14CA4D256 554 aa9.64□□□□□ -0.87
CSNK2A1-204ENST00000400227 FKBP5Q13451 457 aaPredicted RBP9.64□□□□□ -0.87
CSNK2A1-204ENST00000400227 TREML4Q6UXN2 200 aa9.64□□□□□ -0.87
CSNK2A1-204ENST00000400227 SV2AQ7L0J3 742 aa9.64□□□□□ -0.87
CSNK2A1-204ENST00000400227 VWA5B2Q8N398 1253 aa9.64□□□□□ -0.87
CSNK2A1-204ENST00000400227 IRF7Q92985 503 aa9.64□□□□□ -0.87
CSNK2A1-204ENST00000400227 PHACTR1Q9C0D0 580 aa9.64□□□□□ -0.87
CSNK2A1-204ENST00000400227 NUCKS1Q9H1E3 243 aaKnown RBP9.64□□□□□ -0.87
CSNK2A1-204ENST00000400227 ERBB4Q15303 1308 aa9.63□□□□□ -0.87
CSNK2A1-204ENST00000400227 THBS1P07996 1170 aa9.63□□□□□ -0.87
CSNK2A1-204ENST00000400227 ARSJQ5FYB0 599 aaPredicted RBP9.63□□□□□ -0.87
CSNK2A1-204ENST00000400227 ALDH16A1Q8IZ83 802 aa9.63□□□□□ -0.87
CSNK2A1-204ENST00000400227 C7orf43Q8WVR3 580 aa9.63□□□□□ -0.87
CSNK2A1-204ENST00000400227 ZIC5Q96T25 663 aa9.63□□□□□ -0.87
CSNK2A1-204ENST00000400227 GPC6Q9Y625 555 aaPredicted RBP9.63□□□□□ -0.87
CSNK2A1-204ENST00000400227 PTPN23Q9H3S7 1636 aa9.62□□□□□ -0.87
CSNK2A1-204ENST00000400227 NCOA2Q15596 1464 aa9.62□□□□□ -0.87
CSNK2A1-204ENST00000400227 CARNS1A5YM72 827 aa9.62□□□□□ -0.87
CSNK2A1-204ENST00000400227 ATP2B4P23634 1241 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms