RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 FAM193AP78312 1265 aa7.22□□□□□ -1.25
PGBD4-201ENST00000397766 MCM10Q7L590 875 aa7.22□□□□□ -1.25
PGBD4-201ENST00000397766 CALML4Q96GE6 196 aa7.22□□□□□ -1.25
PGBD4-201ENST00000397766 ABCC5O15440 1437 aa7.21□□□□□ -1.25
PGBD4-201ENST00000397766 FAM177A1Q8N128 213 aaPredicted RBP7.21□□□□□ -1.25
PGBD4-201ENST00000397766 EHBP1Q8NDI1 1231 aa7.21□□□□□ -1.25
PGBD4-201ENST00000397766 RPGRQ92834 1020 aaKnown RBP7.21□□□□□ -1.25
PGBD4-201ENST00000397766 BCL11BQ9C0K0 894 aaPredicted RBP7.21□□□□□ -1.25
PGBD4-201ENST00000397766 ARHGEF11O15085 1522 aa7.21□□□□□ -1.25
PGBD4-201ENST00000397766 STAMBPO95630 424 aa7.21□□□□□ -1.26
PGBD4-201ENST00000397766 SSR1P43307 286 aaKnown RBP7.21□□□□□ -1.26
PGBD4-201ENST00000397766 SMC1AQ14683 1233 aaKnown RBP7.21□□□□□ -1.26
PGBD4-201ENST00000397766 MPHOSPH6Q99547 160 aaKnown RBP7.21□□□□□ -1.26
PGBD4-201ENST00000397766 ECHDC1Q9NTX5 307 aa7.21□□□□□ -1.26
PGBD4-201ENST00000397766 ANKIB1Q9P2G1 1089 aa7.21□□□□□ -1.26
PGBD4-201ENST00000397766 CLIP2Q9UDT6 1046 aa7.21□□□□□ -1.26
PGBD4-201ENST00000397766 WDR97A6NE52 1622 aa7.21□□□□□ -1.26
PGBD4-201ENST00000397766 PCF11O94913 1555 aaKnown RBP7.21□□□□□ -1.26
PGBD4-201ENST00000397766 PAFAH1B1P43034 410 aa7.21□□□□□ -1.26
PGBD4-201ENST00000397766 SSH1Q8WYL5 1049 aa7.21□□□□□ -1.26
PGBD4-201ENST00000397766 CDC5LQ99459 802 aaKnown RBP7.21□□□□□ -1.26
PGBD4-201ENST00000397766 TRMT112Q9UI30 125 aaKnown RBP7.21□□□□□ -1.26
PGBD4-201ENST00000397766 GOLIM4O00461 696 aa7.21□□□□□ -1.26
PGBD4-201ENST00000397766 NLRP5P59047 1200 aa7.21□□□□□ -1.26
PGBD4-201ENST00000397766 PDE4BQ07343 736 aa7.21□□□□□ -1.26
PGBD4-201ENST00000397766 ARHGAP45Q92619 1136 aa7.21□□□□□ -1.26
PGBD4-201ENST00000397766 RMND1Q9NWS8 449 aa7.21□□□□□ -1.26
PGBD4-201ENST00000397766 CCDC96Q2M329 555 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 BMP2KLQ5H9B9 411 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 LUZP1Q86V48 1076 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 CNNM3Q8NE01 707 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 GTPBP4Q9BZE4 634 aaKnown RBP7.2□□□□□ -1.26
PGBD4-201ENST00000397766 MINDY4BA8MYZ0 360 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 BAG3O95817 575 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 CCDC172P0C7W6 258 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 ANAPC15P60006 121 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 RBM10P98175 930 aaKnown RBP7.2□□□□□ -1.26
PGBD4-201ENST00000397766 MAP2K1Q02750 393 aaPredicted RBP7.2□□□□□ -1.26
PGBD4-201ENST00000397766 CAMK4Q16566 473 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 SCLT1Q96NL6 688 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 BOLA2Q9H3K6 86 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 IFI16Q16666 785 aaKnown RBP7.2□□□□□ -1.26
PGBD4-201ENST00000397766 PPP1R42Q7Z4L9 355 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 TCP11L1Q9NUJ3 509 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 IFIT3O14879 490 aaKnown RBP7.2□□□□□ -1.26
PGBD4-201ENST00000397766 IFNL2Q8IZJ0 200 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 NUP88Q99567 741 aaPredicted RBP7.2□□□□□ -1.26
PGBD4-201ENST00000397766 ZSCAN16Q9H4T2 348 aaPredicted RBP7.2□□□□□ -1.26
PGBD4-201ENST00000397766 ZC3H6P61129 1189 aaKnown RBP7.2□□□□□ -1.26
PGBD4-201ENST00000397766 DYDC1Q8WWB3 177 aa7.2□□□□□ -1.26
PGBD4-201ENST00000397766 CWC25Q9NXE8 425 aaPredicted RBP7.2□□□□□ -1.26
PGBD4-201ENST00000397766 FLIIQ13045 1269 aa7.19□□□□□ -1.26
PGBD4-201ENST00000397766 NCOA7Q8NI08 942 aa7.19□□□□□ -1.26
PGBD4-201ENST00000397766 DENND4BO75064 1496 aaPredicted RBP7.19□□□□□ -1.26
PGBD4-201ENST00000397766 RANBP6O60518 1105 aaKnown RBP7.19□□□□□ -1.26
PGBD4-201ENST00000397766 TUBB4AP04350 444 aa7.19□□□□□ -1.26
PGBD4-201ENST00000397766 KIF4BQ2VIQ3 1234 aa7.19□□□□□ -1.26
PGBD4-201ENST00000397766 SPINK5Q9NQ38 1064 aaPredicted RBP7.19□□□□□ -1.26
PGBD4-201ENST00000397766 HLA-DOAP06340 250 aa7.19□□□□□ -1.26
PGBD4-201ENST00000397766 ZFYP08048 801 aaPredicted RBP7.19□□□□□ -1.26
PGBD4-201ENST00000397766 FANCAO15360 1455 aa7.19□□□□□ -1.26
PGBD4-201ENST00000397766 GIGYF2Q6Y7W6 1299 aaKnown RBP7.19□□□□□ -1.26
PGBD4-201ENST00000397766 HOOK3Q86VS8 718 aa7.19□□□□□ -1.26
PGBD4-201ENST00000397766 NME9Q86XW9 330 aa7.19□□□□□ -1.26
PGBD4-201ENST00000397766 FERMT1Q9BQL6 677 aa7.19□□□□□ -1.26
PGBD4-201ENST00000397766 KAT14Q9H8E8 782 aa7.19□□□□□ -1.26
PGBD4-201ENST00000397766 SMARCA5O60264 1052 aaPredicted RBP7.19□□□□□ -1.26
PGBD4-201ENST00000397766 IARSP41252 1262 aaKnown RBP7.19□□□□□ -1.26
PGBD4-201ENST00000397766 IFFO1Q0D2I5 559 aa7.19□□□□□ -1.26
PGBD4-201ENST00000397766 PLCD4Q9BRC7 762 aa7.19□□□□□ -1.26
PGBD4-201ENST00000397766 KRT23Q9C075 422 aa7.19□□□□□ -1.26
PGBD4-201ENST00000397766 FSIP1Q8NA03 581 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 ERMNQ8TAM6 284 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 FERMT2Q96AC1 680 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 CABP5Q9NP86 173 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 NUP160Q12769 1436 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 USP37Q86T82 979 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 TMTC2Q8N394 836 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 CTAGE1Q96RT6 745 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 TTC22Q5TAA0 569 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 ZGPATQ8N5A5 531 aaKnown RBP7.18□□□□□ -1.26
PGBD4-201ENST00000397766 PIBF1Q8WXW3 757 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 CNNM2Q9H8M5 875 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 C14orf93Q9H972 538 aaKnown RBP7.18□□□□□ -1.26
PGBD4-201ENST00000397766 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.18□□□□□ -1.26
PGBD4-201ENST00000397766 GJB2P29033 226 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 FERMT3Q86UX7 667 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 EXOC5O00471 708 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 STX6O43752 255 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 MTIF2P46199 727 aaKnown RBP7.18□□□□□ -1.26
PGBD4-201ENST00000397766 CCDC40Q4G0X9 1142 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 MFSD6Q6ZSS7 791 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 FEZ1Q99689 392 aa7.18□□□□□ -1.26
PGBD4-201ENST00000397766 CRNKL1Q9BZJ0 848 aaKnown RBP7.18□□□□□ -1.26
PGBD4-201ENST00000397766 C8orf37Q96NL8 207 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 NEK1Q96PY6 1258 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 GRIN2AQ12879 1464 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 METAP2P50579 478 aaKnown RBP eCLIP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 TMEM67Q5HYA8 995 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 CCDC85AQ96PX6 553 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms