RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.49■□□□□ 0.556e-7■■■□□ 18.7
ATP2A3-205ENST00000397041 ZNF445P59923 1031 aa18.49■□□□□ 0.55
ATP2A3-205ENST00000397041 CHPF2Q9P2E5 772 aa18.49■□□□□ 0.55
ATP2A3-205ENST00000397041 CD2BP2O95400 341 aaKnown RBP18.48■□□□□ 0.55
ATP2A3-205ENST00000397041 IMMTQ16891 758 aaKnown RBP18.48■□□□□ 0.55
ATP2A3-205ENST00000397041 MTHFSDQ2M296 383 aaKnown RBP18.48■□□□□ 0.55
ATP2A3-205ENST00000397041 DISP1Q96F81 1524 aa18.48■□□□□ 0.55
ATP2A3-205ENST00000397041 CCDC69A6NI79 296 aa18.48■□□□□ 0.55
ATP2A3-205ENST00000397041 GADD45BO75293 160 aaPredicted RBP18.48■□□□□ 0.55
ATP2A3-205ENST00000397041 KLHL10Q6JEL2 608 aa18.48■□□□□ 0.55
ATP2A3-205ENST00000397041 NEK1Q96PY6 1258 aa18.48■□□□□ 0.55
ATP2A3-205ENST00000397041 TSC1Q92574 1164 aa18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 KIF2AO00139 706 aaPredicted RBP18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 LUZP1Q86V48 1076 aa18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 MSH6P52701 1360 aa18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 GCC2Q8IWJ2 1684 aa18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 SKILP12757 684 aa18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 ATF3P18847 181 aa18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 FAM173BQ6P4H8 233 aa18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 ERCC4Q92889 916 aaPredicted RBP18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 IFIT1P09914 478 aaKnown RBP18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 GSPT1P15170 499 aaKnown RBP18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 HAND2P61296 217 aa18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 TYRO3Q06418 890 aa18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 STX1AQ16623 288 aa18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 INTS4Q96HW7 963 aaKnown RBP18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 CEP89Q96ST8 783 aa18.47■□□□□ 0.55
ATP2A3-205ENST00000397041 DHX8Q14562 1220 aaKnown RBP18.46■□□□□ 0.55
ATP2A3-205ENST00000397041 GOLIM4O00461 696 aa18.46■□□□□ 0.55
ATP2A3-205ENST00000397041 PTCD1O75127 700 aaKnown RBP18.46■□□□□ 0.55
ATP2A3-205ENST00000397041 PIBF1Q8WXW3 757 aa18.46■□□□□ 0.55
ATP2A3-205ENST00000397041 PIK3R4Q99570 1358 aa18.46■□□□□ 0.55
ATP2A3-205ENST00000397041 FSD2A1L4K1 749 aa18.46■□□□□ 0.55
ATP2A3-205ENST00000397041 CTAGE5O15320 804 aa18.46■□□□□ 0.55
ATP2A3-205ENST00000397041 TOP1P11387 765 aaKnown RBP18.46■□□□□ 0.55
ATP2A3-205ENST00000397041 DDX46Q7L014 1031 aaKnown RBP18.46■□□□□ 0.55
ATP2A3-205ENST00000397041 CCDC102AQ96A19 550 aa18.46■□□□□ 0.55
ATP2A3-205ENST00000397041 SNRKQ9NRH2 765 aa18.46■□□□□ 0.55
ATP2A3-205ENST00000397041 ATP5J2-PTCD1G3V325 749 aa18.46■□□□□ 0.54
ATP2A3-205ENST00000397041 SLC3A2P08195 630 aaKnown RBP18.46■□□□□ 0.54
ATP2A3-205ENST00000397041 TTC21BQ7Z4L5 1316 aa18.45■□□□□ 0.54
ATP2A3-205ENST00000397041 KDM5CP41229 1560 aa18.45■□□□□ 0.54
ATP2A3-205ENST00000397041 H0YHG0 523 aa18.45■□□□□ 0.54
ATP2A3-205ENST00000397041 SNW1Q13573 536 aaKnown RBP18.45■□□□□ 0.54
ATP2A3-205ENST00000397041 AMOTL1Q8IY63 956 aa18.45■□□□□ 0.54
ATP2A3-205ENST00000397041 THEMISQ8N1K5 641 aaPredicted RBP18.45■□□□□ 0.54
ATP2A3-205ENST00000397041 CPLX3Q8WVH0 158 aa18.45■□□□□ 0.54
ATP2A3-205ENST00000397041 A0A087WZG4 1122 aa18.44■□□□□ 0.54
ATP2A3-205ENST00000397041 FAM193AP78312 1265 aa18.44■□□□□ 0.54
ATP2A3-205ENST00000397041 ARHGAP29Q52LW3 1261 aa18.44■□□□□ 0.54
ATP2A3-205ENST00000397041 DACH1Q9UI36 760 aa18.44■□□□□ 0.54
ATP2A3-205ENST00000397041 AMOTL2Q9Y2J4 779 aa18.44■□□□□ 0.54
ATP2A3-205ENST00000397041 CDKL5O76039 1030 aa18.44■□□□□ 0.54
ATP2A3-205ENST00000397041 HSP90AA4PQ58FG1 418 aa18.44■□□□□ 0.54
ATP2A3-205ENST00000397041 G3V3G9 751 aa18.44■□□□□ 0.54
ATP2A3-205ENST00000397041 DCAF8Q5TAQ9 597 aa18.44■□□□□ 0.54
ATP2A3-205ENST00000397041 UBE3BQ7Z3V4 1068 aa18.44■□□□□ 0.54
ATP2A3-205ENST00000397041 STRN4Q9NRL3 753 aa18.44■□□□□ 0.54
ATP2A3-205ENST00000397041 GOLGA8BA8MQT2 603 aa18.43■□□□□ 0.54
ATP2A3-205ENST00000397041 GTF2F1P35269 517 aaKnown RBP eCLIP18.43■□□□□ 0.54
ATP2A3-205ENST00000397041 KIF6Q6ZMV9 814 aa18.43■□□□□ 0.54
ATP2A3-205ENST00000397041 NOL10Q9BSC4 688 aaKnown RBP18.43■□□□□ 0.54
ATP2A3-205ENST00000397041 ZSWIM4Q9H7M6 989 aa18.43■□□□□ 0.54
ATP2A3-205ENST00000397041 SAMD9Q5K651 1589 aa18.43■□□□□ 0.54
ATP2A3-205ENST00000397041 PTPRTO14522 1441 aa18.43■□□□□ 0.54
ATP2A3-205ENST00000397041 USP19O94966 1318 aa18.43■□□□□ 0.54
ATP2A3-205ENST00000397041 NEMFO60524 1076 aa18.43■□□□□ 0.54
ATP2A3-205ENST00000397041 ERLIN1O75477 346 aa18.43■□□□□ 0.54
ATP2A3-205ENST00000397041 CCDC94Q9BW85 323 aaPredicted RBP18.43■□□□□ 0.54
ATP2A3-205ENST00000397041 PROSER2Q86WR7 435 aaPredicted RBP18.43■□□□□ 0.54
ATP2A3-205ENST00000397041 PHAXQ9H814 394 aaKnown RBP18.42■□□□□ 0.54
ATP2A3-205ENST00000397041 MAGEC2Q9UBF1 373 aaPredicted RBP18.42■□□□□ 0.54
ATP2A3-205ENST00000397041 PAXBP1Q9Y5B6 917 aa18.42■□□□□ 0.54
ATP2A3-205ENST00000397041 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
ATP2A3-205ENST00000397041 ZBTB9Q96C00 473 aa18.42■□□□□ 0.54
ATP2A3-205ENST00000397041 EPB41L2O43491 1005 aaKnown RBP18.41■□□□□ 0.54
ATP2A3-205ENST00000397041 TDO2P48775 406 aa18.41■□□□□ 0.54
ATP2A3-205ENST00000397041 HMGB1P09429 215 aaKnown RBP18.41■□□□□ 0.54
ATP2A3-205ENST00000397041 NMIQ13287 307 aaPredicted RBP18.41■□□□□ 0.54
ATP2A3-205ENST00000397041 CCDC144CPQ8IYA2 1237 aa18.41■□□□□ 0.54
ATP2A3-205ENST00000397041 PUS7Q96PZ0 661 aaKnown RBP18.41■□□□□ 0.54
ATP2A3-205ENST00000397041 USP16Q9Y5T5 823 aa18.41■□□□□ 0.54
ATP2A3-205ENST00000397041 ZSCAN12O43309 604 aa18.41■□□□□ 0.54
ATP2A3-205ENST00000397041 TXLNAP40222 546 aa18.41■□□□□ 0.54
ATP2A3-205ENST00000397041 ORC3Q9UBD5 711 aaPredicted RBP18.41■□□□□ 0.54
ATP2A3-205ENST00000397041 GSDMDP57764 484 aa18.41■□□□□ 0.54
ATP2A3-205ENST00000397041 PPIP5K1Q6PFW1 1433 aa18.41■□□□□ 0.54
ATP2A3-205ENST00000397041 NACAP1Q9BZK3 213 aa18.41■□□□□ 0.54
ATP2A3-205ENST00000397041 HYPKQ9NX55 129 aa18.4■□□□□ 0.54
ATP2A3-205ENST00000397041 PNMA6EA0A0J9YXQ4 647 aa18.4■□□□□ 0.54
ATP2A3-205ENST00000397041 EIF3JO75822 258 aaKnown RBP18.4■□□□□ 0.54
ATP2A3-205ENST00000397041 AOPEPQ8N6M6 819 aa18.4■□□□□ 0.54
ATP2A3-205ENST00000397041 TRIM34Q9BYJ4 488 aa18.4■□□□□ 0.54
ATP2A3-205ENST00000397041 ZNHIT6Q9NWK9 470 aaKnown RBP18.4■□□□□ 0.54
ATP2A3-205ENST00000397041 KIF4BQ2VIQ3 1234 aa18.4■□□□□ 0.54
ATP2A3-205ENST00000397041 CNNM3Q8NE01 707 aa18.39■□□□□ 0.53
ATP2A3-205ENST00000397041 SOS1Q07889 1333 aaPredicted RBP18.39■□□□□ 0.53
ATP2A3-205ENST00000397041 CEBPAP49715 358 aaPredicted RBP18.39■□□□□ 0.53
ATP2A3-205ENST00000397041 NCBP3Q53F19 620 aaKnown RBP18.39■□□□□ 0.53
ATP2A3-205ENST00000397041 Q6ZUG5 572 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms