RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 FAM161BQ96MY7 647 aa8.13□□□□□ -1.11
HMGB1P10-201ENST00000395823 DUSP9Q99956 384 aaKnown RBP8.13□□□□□ -1.11
HMGB1P10-201ENST00000395823 BACH2Q9BYV9 841 aa8.13□□□□□ -1.11
HMGB1P10-201ENST00000395823 TNFRSF10AO00220 468 aa8.12□□□□□ -1.11
HMGB1P10-201ENST00000395823 DNM1Q05193 864 aaKnown RBP8.12□□□□□ -1.11
HMGB1P10-201ENST00000395823 PDE3BQ13370 1112 aa8.12□□□□□ -1.11
HMGB1P10-201ENST00000395823 C4orf17Q53FE4 359 aa8.12□□□□□ -1.11
HMGB1P10-201ENST00000395823 TMEM214Q6NUQ4 689 aaKnown RBP8.12□□□□□ -1.11
HMGB1P10-201ENST00000395823 TRIM67Q6ZTA4 783 aa8.12□□□□□ -1.11
HMGB1P10-201ENST00000395823 PARP2Q9UGN5 583 aa8.12□□□□□ -1.11
HMGB1P10-201ENST00000395823 TTC24A2A3L6 582 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 PLA2G4AP47712 749 aa8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 MMRN1Q13201 1228 aa8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 ENOX2Q16206 610 aaKnown RBP8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 TREML1Q86YW5 311 aa8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 INSM2Q96T92 566 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 CFHR5Q9BXR6 569 aa8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 NIF3L1Q9GZT8 377 aa8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 V9GY48 417 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P10-201ENST00000395823 GPC1P35052 558 aa8.1□□□□□ -1.11
HMGB1P10-201ENST00000395823 RNF144AP50876 292 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P10-201ENST00000395823 CYP4X1Q8N118 509 aa8.1□□□□□ -1.11
HMGB1P10-201ENST00000395823 HPS1Q92902 700 aa8.1□□□□□ -1.11
HMGB1P10-201ENST00000395823 TMC4Q7Z404 712 aa8.09□□□□□ -1.11
HMGB1P10-201ENST00000395823 GPR152Q8TDT2 470 aa8.09□□□□□ -1.11
HMGB1P10-201ENST00000395823 GGNBP2Q9H3C7 697 aa8.09□□□□□ -1.11
HMGB1P10-201ENST00000395823 PNMA6FA0A0J9YX94 578 aa8.08□□□□□ -1.12
HMGB1P10-201ENST00000395823 SPINT1O43278 529 aa8.08□□□□□ -1.12
HMGB1P10-201ENST00000395823 USP5P45974 858 aa8.08□□□□□ -1.12
HMGB1P10-201ENST00000395823 HDLBPQ00341 1268 aaKnown RBP8.08□□□□□ -1.12
HMGB1P10-201ENST00000395823 GNASQ5JWF2 1037 aa8.08□□□□□ -1.12
HMGB1P10-201ENST00000395823 DMGDHQ9UI17 866 aaKnown RBP8.08□□□□□ -1.12
HMGB1P10-201ENST00000395823 A6NHS1 94 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 SPATA31C2B4DYI2 1134 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 OPLAHO14841 1288 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 CTSOP43234 321 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 DAB2P98082 770 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 ORC1Q13415 861 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 SLC27A3Q5K4L6 730 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 ZNF280CQ8ND82 737 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 NUDT16Q96DE0 195 aaKnown RBP8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 HSH2DQ96JZ2 352 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 C8orf37Q96NL8 207 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 USP35Q9P2H5 1018 aa8.07□□□□□ -1.12
HMGB1P10-201ENST00000395823 TGFBR3LH3BV60 316 aa8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 MICAL2O94851 1124 aa8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 ATP4AP20648 1035 aa8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 XPCQ01831 940 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 RHPN1Q8TCX5 695 aa8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 SUSD3Q96L08 255 aa8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 TSEN34Q9BSV6 310 aaKnown RBP8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 ZDHHC3Q9NYG2 299 aa8.06□□□□□ -1.12
HMGB1P10-201ENST00000395823 SCAMP3O14828 347 aaKnown RBP8.05□□□□□ -1.12
HMGB1P10-201ENST00000395823 PHKA2P46019 1235 aa8.05□□□□□ -1.12
HMGB1P10-201ENST00000395823 C9orf131Q5VYM1 1079 aa8.05□□□□□ -1.12
HMGB1P10-201ENST00000395823 METTL16Q86W50 562 aaKnown RBP8.05□□□□□ -1.12
HMGB1P10-201ENST00000395823 LINC00528Q8N1L1 170 aa8.05□□□□□ -1.12
HMGB1P10-201ENST00000395823 CSRNP1Q96S65 589 aa8.05□□□□□ -1.12
HMGB1P10-201ENST00000395823 PLA2G2EQ9NZK7 142 aa8.05□□□□□ -1.12
HMGB1P10-201ENST00000395823 EIF1AYO14602 144 aaKnown RBP8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 GTF2E1P29083 439 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 PRR20EP86478 221 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 PRR20CP86479 221 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 PRR20DP86480 221 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 PRR20BP86481 221 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 PRR20AP86496 221 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 FGD1P98174 961 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 ATP2B2Q01814 1243 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 RAD51AP2Q09MP3 1159 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 NBPF1Q3BBV0 1214 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 IER5Q5VY09 327 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 RNF217Q8TC41 542 aa8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 POLMQ9NP87 494 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P10-201ENST00000395823 SORBS3O60504 671 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 GNA15P30679 374 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 POU4F2Q12837 409 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 PSMD2Q13200 908 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 TRIP4Q15650 581 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 C8orf34Q49A92 452 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 ALG1LQ6GMV1 187 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 NBPF10Q6P3W6 841 aaKnown RBP8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 AIDAQ96BJ3 306 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 USP20Q9Y2K6 914 aa8.03□□□□□ -1.12
HMGB1P10-201ENST00000395823 GRNP28799 593 aaKnown RBP8.02□□□□□ -1.13
HMGB1P10-201ENST00000395823 INPP5BP32019 993 aa8.02□□□□□ -1.13
HMGB1P10-201ENST00000395823 IDH3AP50213 366 aa8.02□□□□□ -1.13
HMGB1P10-201ENST00000395823 ZC3H6P61129 1189 aaKnown RBP8.02□□□□□ -1.13
HMGB1P10-201ENST00000395823 BCL11AQ9H165 835 aa8.02□□□□□ -1.13
HMGB1P10-201ENST00000395823 MRS2Q9HD23 443 aa8.02□□□□□ -1.13
HMGB1P10-201ENST00000395823 VTI1BQ9UEU0 232 aa8.02□□□□□ -1.13
HMGB1P10-201ENST00000395823 CAPN5O15484 640 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 CTSHP09668 335 aa8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 PCSK2P16519 638 aa8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 ERCC5P28715 1186 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 FANCCQ00597 558 aa8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 FBF1Q8TES7 1133 aa8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 PIK3R5Q8WYR1 880 aa8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 ZIC5Q96T25 663 aa8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 FOXD3Q9UJU5 478 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P10-201ENST00000395823 GPC6Q9Y625 555 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms