RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 ESPNB1AK53 854 aa23.69■■□□□ 1.38
RCCD1-201ENST00000394258 RIC3Q7Z5B4 369 aa23.69■■□□□ 1.38
RCCD1-201ENST00000394258 TRIM44Q96DX7 344 aaPredicted RBP23.69■■□□□ 1.38
RCCD1-201ENST00000394258 HEG1Q9ULI3 1381 aa23.69■■□□□ 1.38
RCCD1-201ENST00000394258 GRM8O00222 908 aa23.68■■□□□ 1.38
RCCD1-201ENST00000394258 IFIT2P09913 472 aaKnown RBP23.68■■□□□ 1.38
RCCD1-201ENST00000394258 PDIA6Q15084 440 aa23.68■■□□□ 1.38
RCCD1-201ENST00000394258 SIL1Q9H173 461 aa23.68■■□□□ 1.38
RCCD1-201ENST00000394258 BICC1Q9H694 974 aaKnown RBP23.68■■□□□ 1.38
RCCD1-201ENST00000394258 DDX21Q9NR30 783 aaKnown RBP eCLIP23.68■■□□□ 1.38
RCCD1-201ENST00000394258 PHRF1Q9P1Y6 1649 aaKnown RBP23.68■■□□□ 1.38
RCCD1-201ENST00000394258 LINS1Q8NG48 757 aa23.68■■□□□ 1.38
RCCD1-201ENST00000394258 ATF3P18847 181 aa23.67■■□□□ 1.38
RCCD1-201ENST00000394258 MTX1Q13505 466 aa23.67■■□□□ 1.38
RCCD1-201ENST00000394258 KIAA1211Q6ZU35 1233 aa23.67■■□□□ 1.38
RCCD1-201ENST00000394258 AACSQ86V21 672 aa23.67■■□□□ 1.38
RCCD1-201ENST00000394258 RASEFQ8IZ41 740 aa23.67■■□□□ 1.38
RCCD1-201ENST00000394258 JARID2Q92833 1246 aaPredicted RBP23.67■■□□□ 1.38
RCCD1-201ENST00000394258 KAZALD1Q96I82 304 aa23.67■■□□□ 1.38
RCCD1-201ENST00000394258 GLRX3O76003 335 aaKnown RBP23.67■■□□□ 1.38
RCCD1-201ENST00000394258 KLHDC4Q8TBB5 520 aa23.67■■□□□ 1.38
RCCD1-201ENST00000394258 DDX58O95786 925 aaKnown RBP23.67■■□□□ 1.38
RCCD1-201ENST00000394258 CUL4AQ13619 759 aa23.67■■□□□ 1.38
RCCD1-201ENST00000394258 CPA1P15085 419 aa23.66■■□□□ 1.38
RCCD1-201ENST00000394258 LSG1Q9H089 658 aaKnown RBP23.66■■□□□ 1.38
RCCD1-201ENST00000394258 DIAPH3Q9NSV4 1193 aa23.66■■□□□ 1.38
RCCD1-201ENST00000394258 SNX14Q9Y5W7 946 aa23.66■■□□□ 1.38
RCCD1-201ENST00000394258 ADAMTSL3P82987 1691 aa23.66■■□□□ 1.38
RCCD1-201ENST00000394258 RAD50Q92878 1312 aa23.66■■□□□ 1.38
RCCD1-201ENST00000394258 PRIM1P49642 420 aaKnown RBP23.66■■□□□ 1.38
RCCD1-201ENST00000394258 ZNF445P59923 1031 aa23.66■■□□□ 1.38
RCCD1-201ENST00000394258 RBSNQ9H1K0 784 aa23.66■■□□□ 1.38
RCCD1-201ENST00000394258 SLC52A2Q9HAB3 445 aa23.66■■□□□ 1.38
RCCD1-201ENST00000394258 NPHP3Q7Z494 1330 aa23.65■■□□□ 1.38
RCCD1-201ENST00000394258 TATP17735 454 aaPredicted RBP23.65■■□□□ 1.38
RCCD1-201ENST00000394258 CCDC8Q9H0W5 538 aaPredicted RBP23.65■■□□□ 1.38
RCCD1-201ENST00000394258 ECHDC1Q9NTX5 307 aa23.65■■□□□ 1.38
RCCD1-201ENST00000394258 DTNBO60941 627 aa23.65■■□□□ 1.38
RCCD1-201ENST00000394258 IGKV5-2P06315 115 aa23.65■■□□□ 1.38
RCCD1-201ENST00000394258 XAGE3Q8WTP9 111 aa23.65■■□□□ 1.38
RCCD1-201ENST00000394258 TMEM63CQ9P1W3 806 aa23.65■■□□□ 1.38
RCCD1-201ENST00000394258 COPS6Q7L5N1 327 aa23.64■■□□□ 1.38
RCCD1-201ENST00000394258 ZNF496Q96IT1 587 aaPredicted RBP23.64■■□□□ 1.38
RCCD1-201ENST00000394258 BRD1O95696 1058 aa23.64■■□□□ 1.37
RCCD1-201ENST00000394258 PHKG2P15735 406 aa23.64■■□□□ 1.37
RCCD1-201ENST00000394258 TTC41PQ6P2S7 1318 aa23.63■■□□□ 1.37
RCCD1-201ENST00000394258 SASH1O94885 1247 aa23.63■■□□□ 1.37
RCCD1-201ENST00000394258 G3BP1Q13283 466 aaKnown RBP eCLIP23.63■■□□□ 1.37
RCCD1-201ENST00000394258 USP16Q9Y5T5 823 aa23.63■■□□□ 1.37
RCCD1-201ENST00000394258 PTH1RQ03431 593 aa23.62■■□□□ 1.37
RCCD1-201ENST00000394258 DDX54Q8TDD1 881 aaKnown RBP23.62■■□□□ 1.37
RCCD1-201ENST00000394258 MYD88Q99836 296 aa23.62■■□□□ 1.37
RCCD1-201ENST00000394258 TRPM3Q9HCF6 1732 aaPredicted RBP23.62■■□□□ 1.37
RCCD1-201ENST00000394258 EAF2Q96CJ1 260 aaPredicted RBP23.62■■□□□ 1.37
RCCD1-201ENST00000394258 GDPD2Q9HCC8 539 aa23.62■■□□□ 1.37
RCCD1-201ENST00000394258 INTS4Q96HW7 963 aaKnown RBP23.61■■□□□ 1.37
RCCD1-201ENST00000394258 TLR7Q9NYK1 1049 aaKnown RBP23.61■■□□□ 1.37
RCCD1-201ENST00000394258 KDM6AO15550 1401 aaPredicted RBP23.61■■□□□ 1.37
RCCD1-201ENST00000394258 SYCE3A1L190 88 aa23.61■■□□□ 1.37
RCCD1-201ENST00000394258 ERC1Q8IUD2 1116 aa23.61■■□□□ 1.37
RCCD1-201ENST00000394258 OVOS2A0A0G2JMS6 1433 aa23.6■■□□□ 1.37
RCCD1-201ENST00000394258 GPATCH3Q96I76 525 aa23.6■■□□□ 1.37
RCCD1-201ENST00000394258 TMEM94Q12767 1356 aa23.6■■□□□ 1.37
RCCD1-201ENST00000394258 RRP9O43818 475 aaKnown RBP23.6■■□□□ 1.37
RCCD1-201ENST00000394258 CCDC173Q0VFZ6 552 aa23.6■■□□□ 1.37
RCCD1-201ENST00000394258 NEXNQ0ZGT2 675 aa23.6■■□□□ 1.37
RCCD1-201ENST00000394258 HDAC5Q9UQL6 1122 aa23.6■■□□□ 1.37
RCCD1-201ENST00000394258 USP42Q9H9J4 1324 aaKnown RBP23.6■■□□□ 1.37
RCCD1-201ENST00000394258 AK2P54819 239 aa23.59■■□□□ 1.37
RCCD1-201ENST00000394258 TPRNQ4KMQ1 711 aa23.59■■□□□ 1.37
RCCD1-201ENST00000394258 EPHA10Q5JZY3 1008 aa23.59■■□□□ 1.37
RCCD1-201ENST00000394258 LARP1Q6PKG0 1096 aaKnown RBP23.59■■□□□ 1.37
RCCD1-201ENST00000394258 PPP1R9BQ96SB3 815 aa23.59■■□□□ 1.37
RCCD1-201ENST00000394258 CASTP20810 708 aaKnown RBP23.59■■□□□ 1.37
RCCD1-201ENST00000394258 PRPF40BQ6NWY9 871 aaKnown RBP23.59■■□□□ 1.37
RCCD1-201ENST00000394258 IFNL2Q8IZJ0 200 aa23.59■■□□□ 1.37
RCCD1-201ENST00000394258 NEURL1BA8MQ27 555 aa23.58■■□□□ 1.37
RCCD1-201ENST00000394258 IL17RAQ96F46 866 aa23.58■■□□□ 1.37
RCCD1-201ENST00000394258 BOLA2Q9H3K6 86 aa23.58■■□□□ 1.37
RCCD1-201ENST00000394258 CYP27B1O15528 508 aa23.58■■□□□ 1.37
RCCD1-201ENST00000394258 MEGF6O75095 1541 aa23.58■■□□□ 1.37
RCCD1-201ENST00000394258 TTC5Q8N0Z6 440 aa23.58■■□□□ 1.37
RCCD1-201ENST00000394258 GCKRQ14397 625 aa23.57■■□□□ 1.36
RCCD1-201ENST00000394258 ADCK5Q3MIX3 580 aa23.57■■□□□ 1.36
RCCD1-201ENST00000394258 RUFY2Q8WXA3 655 aa23.57■■□□□ 1.36
RCCD1-201ENST00000394258 FAM227BQ96M60 508 aa23.57■■□□□ 1.36
RCCD1-201ENST00000394258 RUFY3Q7L099 469 aa23.56■■□□□ 1.36
RCCD1-201ENST00000394258 EPB41L2O43491 1005 aaKnown RBP23.56■■□□□ 1.36
RCCD1-201ENST00000394258 ANKRD13DQ6ZTN6 518 aa23.56■■□□□ 1.36
RCCD1-201ENST00000394258 TTC14Q96N46 770 aa23.56■■□□□ 1.36
RCCD1-201ENST00000394258 ATP5J2-PTCD1G3V325 749 aa23.56■■□□□ 1.36
RCCD1-201ENST00000394258 PTCD1O75127 700 aaKnown RBP23.56■■□□□ 1.36
RCCD1-201ENST00000394258 ANP32BQ92688 251 aaKnown RBP23.56■■□□□ 1.36
RCCD1-201ENST00000394258 EVI5LQ96CN4 794 aa23.56■■□□□ 1.36
RCCD1-201ENST00000394258 UTYO14607 1347 aa23.55■■□□□ 1.36
RCCD1-201ENST00000394258 GADD45BO75293 160 aaPredicted RBP23.55■■□□□ 1.36
RCCD1-201ENST00000394258 JAKMIP1Q96N16 626 aaKnown RBP23.55■■□□□ 1.36
RCCD1-201ENST00000394258 SIPA1L3O60292 1781 aaPredicted RBP23.54■■□□□ 1.36
RCCD1-201ENST00000394258 METTL22Q9BUU2 404 aaPredicted RBP23.54■■□□□ 1.36
RCCD1-201ENST00000394258 MST1RQ04912 1400 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms