RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 NME9Q86XW9 330 aa19.85■□□□□ 0.77
TRAF3IP1-202ENST00000391993 EPC1Q9H2F5 836 aa19.85■□□□□ 0.77
TRAF3IP1-202ENST00000391993 SLFN14P0C7P3 912 aa19.85■□□□□ 0.77
TRAF3IP1-202ENST00000391993 PUF60Q9UHX1 559 aaKnown RBP19.85■□□□□ 0.77
TRAF3IP1-202ENST00000391993 ADAMTS12P58397 1594 aa19.84■□□□□ 0.77
TRAF3IP1-202ENST00000391993 JAKMIP3Q5VZ66 844 aa19.84■□□□□ 0.77
TRAF3IP1-202ENST00000391993 NUTM2GQ5VZR2 741 aa19.84■□□□□ 0.77
TRAF3IP1-202ENST00000391993 CCDC8Q9H0W5 538 aaPredicted RBP19.84■□□□□ 0.77
TRAF3IP1-202ENST00000391993 ZRANB1Q9UGI0 708 aa19.84■□□□□ 0.77
TRAF3IP1-202ENST00000391993 RAPGEF6Q8TEU7 1601 aa19.84■□□□□ 0.77
TRAF3IP1-202ENST00000391993 STX1AQ16623 288 aa19.84■□□□□ 0.77
TRAF3IP1-202ENST00000391993 MICALL1Q8N3F8 863 aa19.84■□□□□ 0.77
TRAF3IP1-202ENST00000391993 FAM135AQ9P2D6 1515 aa19.84■□□□□ 0.77
TRAF3IP1-202ENST00000391993 IL16Q14005 1332 aa19.84■□□□□ 0.77
TRAF3IP1-202ENST00000391993 NR1I2O75469 434 aa19.84■□□□□ 0.77
TRAF3IP1-202ENST00000391993 CASQ1P31415 396 aa19.84■□□□□ 0.77
TRAF3IP1-202ENST00000391993 KARSQ15046 597 aaKnown RBP19.84■□□□□ 0.77
TRAF3IP1-202ENST00000391993 UTP14AQ9BVJ6 771 aaKnown RBP19.83■□□□□ 0.77
TRAF3IP1-202ENST00000391993 SPTLC3Q9NUV7 552 aa19.83■□□□□ 0.77
TRAF3IP1-202ENST00000391993 ANKRD36BQ8N2N9 1353 aa19.83■□□□□ 0.77
TRAF3IP1-202ENST00000391993 TRIM66O15016 1216 aa19.83■□□□□ 0.76
TRAF3IP1-202ENST00000391993 NEMFO60524 1076 aa19.83■□□□□ 0.76
TRAF3IP1-202ENST00000391993 POLR3DP05423 398 aaPredicted RBP19.83■□□□□ 0.76
TRAF3IP1-202ENST00000391993 ANAPC15P60006 121 aa19.83■□□□□ 0.76
TRAF3IP1-202ENST00000391993 PPARDQ03181 441 aa19.83■□□□□ 0.76
TRAF3IP1-202ENST00000391993 LARP1Q6PKG0 1096 aaKnown RBP19.83■□□□□ 0.76
TRAF3IP1-202ENST00000391993 AKAP17AQ02040 695 aaKnown RBP19.83■□□□□ 0.76
TRAF3IP1-202ENST00000391993 TTC31Q49AM3 519 aaPredicted RBP19.82■□□□□ 0.76
TRAF3IP1-202ENST00000391993 CCDC12Q8WUD4 166 aaPredicted RBP19.82■□□□□ 0.76
TRAF3IP1-202ENST00000391993 SNX14Q9Y5W7 946 aa19.82■□□□□ 0.76
TRAF3IP1-202ENST00000391993 MRVI1Q9Y6F6 885 aa19.82■□□□□ 0.76
TRAF3IP1-202ENST00000391993 ANXA1P04083 346 aa19.82■□□□□ 0.76
TRAF3IP1-202ENST00000391993 RAD51AP2Q09MP3 1159 aa19.82■□□□□ 0.76
TRAF3IP1-202ENST00000391993 OLFM4Q6UX06 510 aa19.82■□□□□ 0.76
TRAF3IP1-202ENST00000391993 KIF4BQ2VIQ3 1234 aa19.82■□□□□ 0.76
TRAF3IP1-202ENST00000391993 RASEFQ8IZ41 740 aa19.82■□□□□ 0.76
TRAF3IP1-202ENST00000391993 LRRIQ1Q96JM4 1722 aa19.82■□□□□ 0.76
TRAF3IP1-202ENST00000391993 PLEKHA4Q9H4M7 779 aa19.82■□□□□ 0.76
TRAF3IP1-202ENST00000391993 SH2B1Q9NRF2 756 aaPredicted RBP19.82■□□□□ 0.76
TRAF3IP1-202ENST00000391993 HDGFL1Q5TGJ6 251 aa19.81■□□□□ 0.76
TRAF3IP1-202ENST00000391993 BRF1Q92994 677 aa19.81■□□□□ 0.76
TRAF3IP1-202ENST00000391993 PNMA6EA0A0J9YXQ4 647 aa19.81■□□□□ 0.76
TRAF3IP1-202ENST00000391993 SYNJ2O15056 1496 aa19.81■□□□□ 0.76
TRAF3IP1-202ENST00000391993 RAD50Q92878 1312 aa19.81■□□□□ 0.76
TRAF3IP1-202ENST00000391993 EIF3JO75822 258 aaKnown RBP19.81■□□□□ 0.76
TRAF3IP1-202ENST00000391993 TOP1P11387 765 aaKnown RBP19.81■□□□□ 0.76
TRAF3IP1-202ENST00000391993 PPP1R42Q7Z4L9 355 aa19.81■□□□□ 0.76
TRAF3IP1-202ENST00000391993 MSH6P52701 1360 aa19.81■□□□□ 0.76
TRAF3IP1-202ENST00000391993 KIAA0556O60303 1618 aa19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 DNMT1P26358 1616 aaKnown RBP19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 DHX8Q14562 1220 aaKnown RBP19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 CCDC144BQ3MJ40 725 aa19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 LRRC8AQ8IWT6 810 aa19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 CCDC144CPQ8IYA2 1237 aa19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 ANKRD7Q92527 254 aa19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 ZNF330Q9Y3S2 320 aaPredicted RBP19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 NPHP3Q7Z494 1330 aa19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 AP5Z1O43299 807 aa19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 LARGE1O95461 756 aa19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 RHOXF2BP0C7M4 288 aa19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 RDXP35241 583 aaKnown RBP19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 GSDMDP57764 484 aa19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 RHOXF2Q9BQY4 288 aa19.8■□□□□ 0.76
TRAF3IP1-202ENST00000391993 CLCN6P51797 869 aa19.79■□□□□ 0.76
TRAF3IP1-202ENST00000391993 DNAAF4Q8WXU2 420 aa19.79■□□□□ 0.76
TRAF3IP1-202ENST00000391993 ACBD3Q9H3P7 528 aa19.79■□□□□ 0.76
TRAF3IP1-202ENST00000391993 NCOA3Q9Y6Q9 1424 aa19.79■□□□□ 0.76
TRAF3IP1-202ENST00000391993 SMC1AQ14683 1233 aaKnown RBP19.79■□□□□ 0.76
TRAF3IP1-202ENST00000391993 CCDC30Q5VVM6 783 aa19.79■□□□□ 0.76
TRAF3IP1-202ENST00000391993 NEUROD6Q96NK8 337 aa19.79■□□□□ 0.76
TRAF3IP1-202ENST00000391993 MTMR6Q9Y217 621 aa19.79■□□□□ 0.76
TRAF3IP1-202ENST00000391993 RUFY3Q7L099 469 aa19.79■□□□□ 0.76
TRAF3IP1-202ENST00000391993 ATP10BO94823 1461 aa19.78■□□□□ 0.76
TRAF3IP1-202ENST00000391993 RTEL1-TNFRSF6BF6WH68 1400 aa19.78■□□□□ 0.76
TRAF3IP1-202ENST00000391993 WAPLQ7Z5K2 1190 aa19.78■□□□□ 0.76
TRAF3IP1-202ENST00000391993 CAGE1Q8TC20 777 aa19.78■□□□□ 0.76
TRAF3IP1-202ENST00000391993 ERLIN1O75477 346 aa19.78■□□□□ 0.76
TRAF3IP1-202ENST00000391993 ZNF396Q96N95 335 aaPredicted RBP19.78■□□□□ 0.76
TRAF3IP1-202ENST00000391993 GOLGA8FQ08AF8 430 aa19.78■□□□□ 0.76
TRAF3IP1-202ENST00000391993 GOLGA8DPQ0D2H9 430 aa19.78■□□□□ 0.76
TRAF3IP1-202ENST00000391993 RBM8AQ9Y5S9 174 aaKnown RBP19.78■□□□□ 0.76
TRAF3IP1-202ENST00000391993 CCP110O43303 1012 aa19.77■□□□□ 0.76
TRAF3IP1-202ENST00000391993 SART3Q15020 963 aaKnown RBP19.77■□□□□ 0.76
TRAF3IP1-202ENST00000391993 TARBP1Q13395 1621 aaKnown RBP19.77■□□□□ 0.76
TRAF3IP1-202ENST00000391993 A0A1B0GVL5 298 aa19.77■□□□□ 0.75
TRAF3IP1-202ENST00000391993 ZNF526Q8TF50 670 aaPredicted RBP19.77■□□□□ 0.75
TRAF3IP1-202ENST00000391993 FLIIQ13045 1269 aa19.76■□□□□ 0.75
TRAF3IP1-202ENST00000391993 KLHL10Q6JEL2 608 aa19.76■□□□□ 0.75
TRAF3IP1-202ENST00000391993 LZTFL1Q9NQ48 299 aa19.76■□□□□ 0.75
TRAF3IP1-202ENST00000391993 DNAJC21Q5F1R6 531 aaKnown RBP19.76■□□□□ 0.75
TRAF3IP1-202ENST00000391993 CUL4AQ13619 759 aa19.76■□□□□ 0.75
TRAF3IP1-202ENST00000391993 RHPN1Q8TCX5 695 aa19.76■□□□□ 0.75
TRAF3IP1-202ENST00000391993 LEO1Q8WVC0 666 aaPredicted RBP19.76■□□□□ 0.75
TRAF3IP1-202ENST00000391993 KIF1BPQ96EK5 621 aa19.76■□□□□ 0.75
TRAF3IP1-202ENST00000391993 GDAP1L1Q96MZ0 367 aa19.76■□□□□ 0.75
TRAF3IP1-202ENST00000391993 JAK2O60674 1132 aa19.75■□□□□ 0.75
TRAF3IP1-202ENST00000391993 RUFY1Q96T51 708 aa19.75■□□□□ 0.75
TRAF3IP1-202ENST00000391993 RAI14Q9P0K7 980 aa19.75■□□□□ 0.75
TRAF3IP1-202ENST00000391993 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.75■□□□□ 0.753e-6■■■■□ 25.4
TRAF3IP1-202ENST00000391993 MORC2Q9Y6X9 1032 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms