RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 GAS2L2Q8NHY3 880 aa7.33□□□□□ -1.24
TRAV40-201ENST00000390467 HSH2DQ96JZ2 352 aa7.33□□□□□ -1.24
TRAV40-201ENST00000390467 GGA1Q9UJY5 639 aa7.33□□□□□ -1.24
TRAV40-201ENST00000390467 GDF2Q9UK05 429 aaPredicted RBP7.33□□□□□ -1.24
TRAV40-201ENST00000390467 GJA3Q9Y6H8 435 aa7.33□□□□□ -1.24
TRAV40-201ENST00000390467 FAM196BA6NMK8 535 aa7.32□□□□□ -1.24
TRAV40-201ENST00000390467 GDF11O95390 407 aa7.32□□□□□ -1.24
TRAV40-201ENST00000390467 SNRPNP63162 240 aaKnown RBP7.32□□□□□ -1.24
TRAV40-201ENST00000390467 LARP1Q6PKG0 1096 aaKnown RBP7.32□□□□□ -1.24
TRAV40-201ENST00000390467 TMEM151AQ8N4L1 468 aa7.32□□□□□ -1.24
TRAV40-201ENST00000390467 KCTD17Q8N5Z5 321 aa7.32□□□□□ -1.24
TRAV40-201ENST00000390467 GOLGA6L1Q8N7Z2 621 aa7.32□□□□□ -1.24
TRAV40-201ENST00000390467 GALNT6Q8NCL4 622 aa7.32□□□□□ -1.24
TRAV40-201ENST00000390467 RHPN1Q8TCX5 695 aa7.32□□□□□ -1.24
TRAV40-201ENST00000390467 SCARF2Q96GP6 870 aaPredicted RBP7.32□□□□□ -1.24
TRAV40-201ENST00000390467 PHACTR1Q9C0D0 580 aa7.32□□□□□ -1.24
TRAV40-201ENST00000390467 KLF15Q9UIH9 416 aa7.32□□□□□ -1.24
TRAV40-201ENST00000390467 HCN4Q9Y3Q4 1203 aa7.32□□□□□ -1.24
TRAV40-201ENST00000390467 RBM19Q9Y4C8 960 aaKnown RBP7.32□□□□□ -1.24
TRAV40-201ENST00000390467 NEURL1BA8MQ27 555 aa7.31□□□□□ -1.24
TRAV40-201ENST00000390467 ARAFP10398 606 aa7.31□□□□□ -1.24
TRAV40-201ENST00000390467 HOXB4P17483 251 aaPredicted RBP7.31□□□□□ -1.24
TRAV40-201ENST00000390467 FAM182BQ5T319 152 aa7.31□□□□□ -1.24
TRAV40-201ENST00000390467 ANKMY2Q8IV38 441 aa7.31□□□□□ -1.24
TRAV40-201ENST00000390467 EDARADDQ8WWZ3 215 aa7.31□□□□□ -1.24
TRAV40-201ENST00000390467 SCG3Q8WXD2 468 aaKnown RBP7.31□□□□□ -1.24
TRAV40-201ENST00000390467 ARXQ96QS3 562 aa7.31□□□□□ -1.24
TRAV40-201ENST00000390467 VRTNQ9H8Y1 702 aa7.31□□□□□ -1.24
TRAV40-201ENST00000390467 GPC6Q9Y625 555 aaPredicted RBP7.31□□□□□ -1.24
TRAV40-201ENST00000390467 ZNF280CQ8ND82 737 aa7.3□□□□□ -1.24
TRAV40-201ENST00000390467 C2orf49Q9BVC5 232 aaPredicted RBP7.3□□□□□ -1.24
TRAV40-201ENST00000390467 DNMT3AQ9Y6K1 912 aaPredicted RBP7.3□□□□□ -1.24
TRAV40-201ENST00000390467 ATAD2Q6PL18 1390 aa7.3□□□□□ -1.24
TRAV40-201ENST00000390467 EPXP11678 715 aa7.29□□□□□ -1.24
TRAV40-201ENST00000390467 CDCA8Q53HL2 280 aa7.29□□□□□ -1.24
TRAV40-201ENST00000390467 C1orf53Q5VUE5 145 aa7.29□□□□□ -1.24
TRAV40-201ENST00000390467 KANK3Q6NY19 840 aa7.29□□□□□ -1.24
TRAV40-201ENST00000390467 FCHSD1Q86WN1 690 aa7.29□□□□□ -1.24
TRAV40-201ENST00000390467 CHMP7Q8WUX9 453 aaPredicted RBP7.29□□□□□ -1.24
TRAV40-201ENST00000390467 HINFPQ9BQA5 517 aa7.29□□□□□ -1.24
TRAV40-201ENST00000390467 PCBP4P57723 403 aaKnown RBP7.28□□□□□ -1.24
TRAV40-201ENST00000390467 SFSWAPQ12872 951 aaKnown RBP7.28□□□□□ -1.24
TRAV40-201ENST00000390467 ALDH16A1Q8IZ83 802 aa7.28□□□□□ -1.24
TRAV40-201ENST00000390467 STAG2Q8N3U4 1231 aa7.28□□□□□ -1.24
TRAV40-201ENST00000390467 NGLY1Q96IV0 654 aa7.28□□□□□ -1.24
TRAV40-201ENST00000390467 MARK1Q9P0L2 795 aa7.28□□□□□ -1.24
TRAV40-201ENST00000390467 CHMP3Q9Y3E7 222 aa7.28□□□□□ -1.24
TRAV40-201ENST00000390467 RFX1P22670 979 aa7.27□□□□□ -1.25
TRAV40-201ENST00000390467 ADH6P28332 368 aa7.27□□□□□ -1.25
TRAV40-201ENST00000390467 TYRO3Q06418 890 aa7.27□□□□□ -1.25
TRAV40-201ENST00000390467 LAMC2Q13753 1193 aa7.27□□□□□ -1.25
TRAV40-201ENST00000390467 ZNF468Q5VIY5 522 aaPredicted RBP7.27□□□□□ -1.25
TRAV40-201ENST00000390467 PODNQ7Z5L7 613 aa7.27□□□□□ -1.25
TRAV40-201ENST00000390467 SUSD3Q96L08 255 aa7.27□□□□□ -1.25
TRAV40-201ENST00000390467 BEND7Q8N7W2 519 aaPredicted RBP7.26□□□□□ -1.25
TRAV40-201ENST00000390467 SLC30A3Q99726 388 aa7.26□□□□□ -1.25
TRAV40-201ENST00000390467 PHF20L1A8MW92 1017 aa7.25□□□□□ -1.25
TRAV40-201ENST00000390467 IGFBP4P22692 258 aa7.25□□□□□ -1.25
TRAV40-201ENST00000390467 RAB44Q7Z6P3 723 aaPredicted RBP7.25□□□□□ -1.25
TRAV40-201ENST00000390467 DCAF5Q96JK2 942 aa7.25□□□□□ -1.25
TRAV40-201ENST00000390467 BTBD6Q96KE9 485 aa7.25□□□□□ -1.25
TRAV40-201ENST00000390467 MDFIQ99750 246 aa7.25□□□□□ -1.25
TRAV40-201ENST00000390467 RRAGCQ9HB90 399 aa7.25□□□□□ -1.25
TRAV40-201ENST00000390467 NEUROD4Q9HD90 331 aa7.25□□□□□ -1.25
TRAV40-201ENST00000390467 BRD7Q9NPI1 651 aa7.25□□□□□ -1.25
TRAV40-201ENST00000390467 AVENQ9NQS1 362 aaPredicted RBP7.25□□□□□ -1.25
TRAV40-201ENST00000390467 ZMIZ1Q9ULJ6 1067 aa7.25□□□□□ -1.25
TRAV40-201ENST00000390467 PRR12Q9ULL5 1215 aa7.25□□□□□ -1.25
TRAV40-201ENST00000390467 ITGB2P05107 769 aa7.24□□□□□ -1.25
TRAV40-201ENST00000390467 AMPD1P23109 780 aa7.24□□□□□ -1.25
TRAV40-201ENST00000390467 DGKGP49619 791 aa7.24□□□□□ -1.25
TRAV40-201ENST00000390467 LINC00114Q6XXX2 140 aa7.24□□□□□ -1.25
TRAV40-201ENST00000390467 CHSY3Q70JA7 882 aa7.24□□□□□ -1.25
TRAV40-201ENST00000390467 SYT9Q86SS6 491 aa7.24□□□□□ -1.25
TRAV40-201ENST00000390467 CEP63Q96MT8 703 aa7.24□□□□□ -1.25
TRAV40-201ENST00000390467 ZMYND15Q9H091 742 aa7.24□□□□□ -1.25
TRAV40-201ENST00000390467 NOVA2Q9UNW9 492 aaKnown RBP7.24□□□□□ -1.25
TRAV40-201ENST00000390467 BCS1LQ9Y276 419 aa7.24□□□□□ -1.25
TRAV40-201ENST00000390467 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.23□□□□□ -1.25
TRAV40-201ENST00000390467 COL8A1P27658 744 aa7.23□□□□□ -1.25
TRAV40-201ENST00000390467 WEE1P30291 646 aa7.23□□□□□ -1.25
TRAV40-201ENST00000390467 SRPK2P78362 688 aaKnown RBP7.23□□□□□ -1.25
TRAV40-201ENST00000390467 SPEM2Q0P670 501 aa7.23□□□□□ -1.25
TRAV40-201ENST00000390467 STK32AQ8WU08 396 aa7.23□□□□□ -1.25
TRAV40-201ENST00000390467 SUV39H2Q9H5I1 410 aa7.23□□□□□ -1.25
TRAV40-201ENST00000390467 MKL2Q9ULH7 1088 aa7.23□□□□□ -1.25
TRAV40-201ENST00000390467 RTN1Q16799 776 aa7.22□□□□□ -1.25
TRAV40-201ENST00000390467 BTLAQ7Z6A9 289 aa7.22□□□□□ -1.25
TRAV40-201ENST00000390467 FAM200AQ8TCP9 573 aa7.22□□□□□ -1.25
TRAV40-201ENST00000390467 QTRT2Q9H974 415 aaKnown RBP7.22□□□□□ -1.25
TRAV40-201ENST00000390467 ANKIB1Q9P2G1 1089 aa7.22□□□□□ -1.25
TRAV40-201ENST00000390467 GRNP28799 593 aaKnown RBP7.21□□□□□ -1.26
TRAV40-201ENST00000390467 KCNQ4P56696 695 aa7.21□□□□□ -1.26
TRAV40-201ENST00000390467 GPAT2Q6NUI2 795 aa7.21□□□□□ -1.26
TRAV40-201ENST00000390467 KLK14Q9P0G3 267 aa7.21□□□□□ -1.26
TRAV40-201ENST00000390467 ARID3CA6NKF2 412 aa7.2□□□□□ -1.26
TRAV40-201ENST00000390467 TGFBR3LH3BV60 316 aa7.2□□□□□ -1.26
TRAV40-201ENST00000390467 FOXO3O43524 673 aa7.2□□□□□ -1.26
TRAV40-201ENST00000390467 SIN3BO75182 1162 aa7.2□□□□□ -1.26
TRAV40-201ENST00000390467 FAM69CQ0P6D2 419 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms