RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 STARD3NLO95772 234 aa15.24■□□□□ 0.03
SPTBN1-203ENST00000389980 TEX13AQ9BXU3 409 aaPredicted RBP15.24■□□□□ 0.03
SPTBN1-203ENST00000389980 ATP5J2-PTCD1G3V325 749 aa15.23■□□□□ 0.03
SPTBN1-203ENST00000389980 CYP19A1P11511 503 aaPredicted RBP15.23■□□□□ 0.03
SPTBN1-203ENST00000389980 ZBTB3Q9H5J0 574 aa15.23■□□□□ 0.03
SPTBN1-203ENST00000389980 TJP1Q07157 1748 aa15.23■□□□□ 0.03
SPTBN1-203ENST00000389980 NEURL1BA8MQ27 555 aa15.22■□□□□ 0.03
SPTBN1-203ENST00000389980 NEXNQ0ZGT2 675 aa15.22■□□□□ 0.03
SPTBN1-203ENST00000389980 CHD1LQ86WJ1 897 aa15.22■□□□□ 0.03
SPTBN1-203ENST00000389980 PLBD2Q8NHP8 589 aa15.22■□□□□ 0.03
SPTBN1-203ENST00000389980 AFDNP55196 1824 aaKnown RBP15.22■□□□□ 0.03
SPTBN1-203ENST00000389980 ATP8B2P98198 1209 aa15.22■□□□□ 0.03
SPTBN1-203ENST00000389980 JARID2Q92833 1246 aaPredicted RBP15.22■□□□□ 0.03
SPTBN1-203ENST00000389980 SEPT12Q8IYM1 358 aa15.21■□□□□ 0.03
SPTBN1-203ENST00000389980 ARXQ96QS3 562 aa15.21■□□□□ 0.03
SPTBN1-203ENST00000389980 LOC102724428A0A0B4J2F2 783 aa15.21■□□□□ 0.02
SPTBN1-203ENST00000389980 GRM8O00222 908 aa15.21■□□□□ 0.02
SPTBN1-203ENST00000389980 MSH5O43196 834 aa15.21■□□□□ 0.02
SPTBN1-203ENST00000389980 HMMRO75330 724 aa15.21■□□□□ 0.02
SPTBN1-203ENST00000389980 ATP6V1AP38606 617 aa15.21■□□□□ 0.02
SPTBN1-203ENST00000389980 SIK1P57059 783 aa15.21■□□□□ 0.02
SPTBN1-203ENST00000389980 ZBTB1Q9Y2K1 713 aa15.21■□□□□ 0.02
SPTBN1-203ENST00000389980 NUP188Q5SRE5 1749 aa15.2■□□□□ 0.02
SPTBN1-203ENST00000389980 PALLDQ8WX93 1383 aa15.2■□□□□ 0.02
SPTBN1-203ENST00000389980 GCKRQ14397 625 aa15.2■□□□□ 0.02
SPTBN1-203ENST00000389980 PPP1R42Q7Z4L9 355 aa15.2■□□□□ 0.02
SPTBN1-203ENST00000389980 EXOC6BQ9Y2D4 811 aa15.2■□□□□ 0.02
SPTBN1-203ENST00000389980 SMARCA5O60264 1052 aaPredicted RBP15.19■□□□□ 0.02
SPTBN1-203ENST00000389980 ONECUT3O60422 494 aaPredicted RBP15.19■□□□□ 0.02
SPTBN1-203ENST00000389980 BACH2Q9BYV9 841 aa15.19■□□□□ 0.02
SPTBN1-203ENST00000389980 KCNQ4P56696 695 aa15.19■□□□□ 0.02
SPTBN1-203ENST00000389980 ITPK1Q13572 414 aa15.19■□□□□ 0.02
SPTBN1-203ENST00000389980 SUCLG2Q96I99 432 aa15.19■□□□□ 0.02
SPTBN1-203ENST00000389980 ERICH6Q7L0X2 663 aa15.18■□□□□ 0.02
SPTBN1-203ENST00000389980 MYH14Q7Z406 1995 aaKnown RBP15.18■□□□□ 0.02
SPTBN1-203ENST00000389980 SRGAP3O43295 1099 aa15.18■□□□□ 0.02
SPTBN1-203ENST00000389980 C16orf71Q8IYS4 520 aaPredicted RBP15.18■□□□□ 0.02
SPTBN1-203ENST00000389980 KAZALD1Q96I82 304 aa15.18■□□□□ 0.02
SPTBN1-203ENST00000389980 UTYO14607 1347 aa15.17■□□□□ 0.02
SPTBN1-203ENST00000389980 C8orf34Q49A92 452 aa15.17■□□□□ 0.02
SPTBN1-203ENST00000389980 BTAF1O14981 1849 aa15.17■□□□□ 0.02
SPTBN1-203ENST00000389980 RTL5Q5HYW3 569 aaPredicted RBP15.17■□□□□ 0.02
SPTBN1-203ENST00000389980 SSH3Q8TE77 659 aa15.17■□□□□ 0.02
SPTBN1-203ENST00000389980 SMARCC1Q92922 1105 aaPredicted RBP15.17■□□□□ 0.02
SPTBN1-203ENST00000389980 BICC1Q9H694 974 aaKnown RBP15.17■□□□□ 0.02
SPTBN1-203ENST00000389980 SBF2Q86WG5 1849 aa15.16■□□□□ 0.02
SPTBN1-203ENST00000389980 CRKLP46109 303 aaKnown RBP15.16■□□□□ 0.02
SPTBN1-203ENST00000389980 FAM161AQ3B820 660 aa15.16■□□□□ 0.02
SPTBN1-203ENST00000389980 INTS5Q6P9B9 1019 aaKnown RBP15.16■□□□□ 0.02
SPTBN1-203ENST00000389980 UBE3BQ7Z3V4 1068 aa15.16■□□□□ 0.02
SPTBN1-203ENST00000389980 A0A087WZG4 1122 aa15.15■□□□□ 0.02
SPTBN1-203ENST00000389980 POLA2Q14181 598 aa15.15■□□□□ 0.02
SPTBN1-203ENST00000389980 EPHA10Q5JZY3 1008 aa15.15■□□□□ 0.02
SPTBN1-203ENST00000389980 KIF6Q6ZMV9 814 aa15.15■□□□□ 0.02
SPTBN1-203ENST00000389980 OTUD7AQ8TE49 926 aaPredicted RBP15.15■□□□□ 0.02
SPTBN1-203ENST00000389980 BRWD3Q6RI45 1802 aa15.15■□□□□ 0.02
SPTBN1-203ENST00000389980 HLFQ16534 295 aa15.15■□□□□ 0.02
SPTBN1-203ENST00000389980 TBC1D2BQ9UPU7 963 aa15.15■□□□□ 0.02
SPTBN1-203ENST00000389980 NHSQ6T4R5 1651 aa15.14■□□□□ 0.01
SPTBN1-203ENST00000389980 CCDC87Q9NVE4 849 aa15.14■□□□□ 0.01
SPTBN1-203ENST00000389980 ZBTB47Q9UFB7 747 aaPredicted RBP15.14■□□□□ 0.01
SPTBN1-203ENST00000389980 SURF6O75683 361 aaKnown RBP15.14■□□□□ 0.01
SPTBN1-203ENST00000389980 IL6STP40189 918 aaPredicted RBP15.14■□□□□ 0.01
SPTBN1-203ENST00000389980 MAP3K15Q6ZN16 1313 aa15.13■□□□□ 0.01
SPTBN1-203ENST00000389980 TCIRG1Q13488 830 aa15.13■□□□□ 0.01
SPTBN1-203ENST00000389980 LINC00116Q8NCU8 138 aa15.13■□□□□ 0.01
SPTBN1-203ENST00000389980 CWC25Q9NXE8 425 aaPredicted RBP15.13■□□□□ 0.01
SPTBN1-203ENST00000389980 IBTKQ9P2D0 1353 aaPredicted RBP15.13■□□□□ 0.01
SPTBN1-203ENST00000389980 CASP7P55210 303 aa15.12■□□□□ 0.01
SPTBN1-203ENST00000389980 MTX1Q13505 466 aa15.12■□□□□ 0.01
SPTBN1-203ENST00000389980 DZIP3Q86Y13 1208 aaKnown RBP15.12■□□□□ 0.01
SPTBN1-203ENST00000389980 PA2G4Q9UQ80 394 aaKnown RBP15.12■□□□□ 0.01
SPTBN1-203ENST00000389980 NUP98P52948 1817 aa15.12■□□□□ 0.01
SPTBN1-203ENST00000389980 GPTP24298 496 aa15.12■□□□□ 0.01
SPTBN1-203ENST00000389980 EIF5P55010 431 aaKnown RBP15.12■□□□□ 0.01
SPTBN1-203ENST00000389980 NPM2Q86SE8 214 aaKnown RBP15.12■□□□□ 0.01
SPTBN1-203ENST00000389980 PLEKHM2Q8IWE5 1019 aa15.12■□□□□ 0.01
SPTBN1-203ENST00000389980 ISCA1Q9BUE6 129 aa15.12■□□□□ 0.01
SPTBN1-203ENST00000389980 HDAC5Q9UQL6 1122 aa15.12■□□□□ 0.01
SPTBN1-203ENST00000389980 COL5A3P25940 1745 aaPredicted RBP15.12■□□□□ 0.01
SPTBN1-203ENST00000389980 H7C1W4 665 aa15.11■□□□□ 0.01
SPTBN1-203ENST00000389980 GIGYF2Q6Y7W6 1299 aaKnown RBP15.11■□□□□ 0.01
SPTBN1-203ENST00000389980 CCDC191Q8NCU4 936 aa15.11■□□□□ 0.01
SPTBN1-203ENST00000389980 LRRCC1Q9C099 1032 aa15.11■□□□□ 0.01
SPTBN1-203ENST00000389980 SMIM5Q71RC9 77 aa15.11■□□□□ 0.01
SPTBN1-203ENST00000389980 IL1RAPL2Q9NP60 686 aa15.11■□□□□ 0.01
SPTBN1-203ENST00000389980 CICQ96RK0 1608 aaPredicted RBP15.1■□□□□ 0.01
SPTBN1-203ENST00000389980 KRT27Q7Z3Y8 459 aa15.1■□□□□ 0.01
SPTBN1-203ENST00000389980 KLHDC4Q8TBB5 520 aa15.1■□□□□ 0.01
SPTBN1-203ENST00000389980 ZNF772Q68DY9 489 aaPredicted RBP15.09■□□□□ 0.01
SPTBN1-203ENST00000389980 RREB1Q92766 1687 aa15.09■□□□□ 0.01
SPTBN1-203ENST00000389980 SEC24BO95487 1268 aa15.08■□□□□ 0.01
SPTBN1-203ENST00000389980 RBM6P78332 1123 aaKnown RBP15.08■□□□□ 0.01
SPTBN1-203ENST00000389980 SYNE4Q8N205 404 aa15.08■□□□□ 0.01
SPTBN1-203ENST00000389980 CCNL1Q9UK58 526 aaPredicted RBP15.08■□□□□ 0.01
SPTBN1-203ENST00000389980 ANKRD36CQ5JPF3 1778 aa15.08■□□□□ 0
SPTBN1-203ENST00000389980 ZNF831Q5JPB2 1677 aa15.08■□□□□ 0
SPTBN1-203ENST00000389980 OS9Q13438 667 aaPredicted RBP15.08■□□□□ 0
SPTBN1-203ENST00000389980 TSHZ3Q63HK5 1081 aa15.08■□□□□ 0
SPTBN1-203ENST00000389980 FAM89AQ96GI7 184 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms