RNA–Protein interactions for RNA: ENST00000382194.6

SMARCA2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMARCA2, Length 5,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-208ENST00000382194 APBB1IPQ7Z5R6 666 aaPredicted RBP16.11■□□□□ 0.17
SMARCA2-208ENST00000382194 BBXQ8WY36 941 aaPredicted RBP16.11■□□□□ 0.17
SMARCA2-208ENST00000382194 DDX11Q96FC9 970 aa16.11■□□□□ 0.17
SMARCA2-208ENST00000382194 MTIF2P46199 727 aaKnown RBP16.11■□□□□ 0.17
SMARCA2-208ENST00000382194 GRM1Q13255 1194 aa16.11■□□□□ 0.17
SMARCA2-208ENST00000382194 GRIN2BQ13224 1484 aa16.11■□□□□ 0.17
SMARCA2-208ENST00000382194 CTAGE5O15320 804 aa16.11■□□□□ 0.17
SMARCA2-208ENST00000382194 RFX1P22670 979 aa16.11■□□□□ 0.17
SMARCA2-208ENST00000382194 UBE4AQ14139 1066 aa16.11■□□□□ 0.17
SMARCA2-208ENST00000382194 C6orf163Q5TEZ5 329 aa16.11■□□□□ 0.17
SMARCA2-208ENST00000382194 CRNKL1Q9BZJ0 848 aaKnown RBP16.11■□□□□ 0.17
SMARCA2-208ENST00000382194 RRS1Q15050 365 aaKnown RBP16.1■□□□□ 0.17
SMARCA2-208ENST00000382194 TTC12Q9H892 705 aaPredicted RBP16.1■□□□□ 0.17
SMARCA2-208ENST00000382194 TSPY2A6NKD2 308 aa16.1■□□□□ 0.17
SMARCA2-208ENST00000382194 TOM1O60784 492 aa16.1■□□□□ 0.17
SMARCA2-208ENST00000382194 CCDC82Q8N4S0 544 aa16.1■□□□□ 0.17
SMARCA2-208ENST00000382194 KLHL10Q6JEL2 608 aa16.1■□□□□ 0.17
SMARCA2-208ENST00000382194 PHF8Q9UPP1 1060 aa16.1■□□□□ 0.17
SMARCA2-208ENST00000382194 PPP1R14CQ8TAE6 165 aa16.09■□□□□ 0.17
SMARCA2-208ENST00000382194 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
SMARCA2-208ENST00000382194 TMCO3Q6UWJ1 677 aa16.09■□□□□ 0.17
SMARCA2-208ENST00000382194 IMPG2Q9BZV3 1241 aa16.09■□□□□ 0.17
SMARCA2-208ENST00000382194 PDCL2Q8N4E4 241 aa16.09■□□□□ 0.17
SMARCA2-208ENST00000382194 TBC1D5Q92609 795 aa16.09■□□□□ 0.17
SMARCA2-208ENST00000382194 FGD5Q6ZNL6 1462 aa16.09■□□□□ 0.17
SMARCA2-208ENST00000382194 UQCRFS1P1P0C7P4 283 aa16.08■□□□□ 0.17
SMARCA2-208ENST00000382194 TOP1P11387 765 aaKnown RBP16.08■□□□□ 0.17
SMARCA2-208ENST00000382194 SPECC1Q5M775 1068 aa16.08■□□□□ 0.17
SMARCA2-208ENST00000382194 KANK3Q6NY19 840 aa16.08■□□□□ 0.17
SMARCA2-208ENST00000382194 MICALCLQ6ZW33 695 aa16.08■□□□□ 0.17
SMARCA2-208ENST00000382194 SMARCA4P51532 1647 aa16.08■□□□□ 0.17
SMARCA2-208ENST00000382194 NDC80O14777 642 aa16.08■□□□□ 0.17
SMARCA2-208ENST00000382194 CCDC175P0C221 793 aa16.08■□□□□ 0.16
SMARCA2-208ENST00000382194 NUP88Q99567 741 aaPredicted RBP16.08■□□□□ 0.16
SMARCA2-208ENST00000382194 PHACTR2O75167 634 aa16.08■□□□□ 0.16
SMARCA2-208ENST00000382194 IDEP14735 1019 aa16.08■□□□□ 0.16
SMARCA2-208ENST00000382194 MX1P20591 662 aa16.08■□□□□ 0.16
SMARCA2-208ENST00000382194 KIF4BQ2VIQ3 1234 aa16.08■□□□□ 0.16
SMARCA2-208ENST00000382194 NBPF6Q5VWK0 638 aa16.08■□□□□ 0.16
SMARCA2-208ENST00000382194 NBPF5PQ86XG9 351 aaPredicted RBP16.08■□□□□ 0.16
SMARCA2-208ENST00000382194 NBPF4Q96M43 638 aa16.08■□□□□ 0.16
SMARCA2-208ENST00000382194 ERBINQ96RT1 1412 aa16.07■□□□□ 0.16
SMARCA2-208ENST00000382194 NBPF7P0C2Y1 421 aaPredicted RBP16.07■□□□□ 0.16
SMARCA2-208ENST00000382194 LMOD1P29536 600 aaPredicted RBP16.07■□□□□ 0.16
SMARCA2-208ENST00000382194 UBA7P41226 1012 aa16.07■□□□□ 0.16
SMARCA2-208ENST00000382194 SMARCC1Q92922 1105 aaPredicted RBP16.07■□□□□ 0.16
SMARCA2-208ENST00000382194 PLEKHH1Q9ULM0 1364 aa16.07■□□□□ 0.16
SMARCA2-208ENST00000382194 TMCO5BA8MYB1 307 aa16.07■□□□□ 0.16
SMARCA2-208ENST00000382194 CCDC152Q4G0S7 254 aa16.07■□□□□ 0.16
SMARCA2-208ENST00000382194 NUTM1Q86Y26 1132 aa16.07■□□□□ 0.16
SMARCA2-208ENST00000382194 KIAA1524Q8TCG1 905 aa16.07■□□□□ 0.16
SMARCA2-208ENST00000382194 DBF4Q9UBU7 674 aaPredicted RBP16.07■□□□□ 0.16
SMARCA2-208ENST00000382194 GOLIM4O00461 696 aa16.07■□□□□ 0.16
SMARCA2-208ENST00000382194 KRT13P13646 458 aa16.07■□□□□ 0.16
SMARCA2-208ENST00000382194 BEGAINQ9BUH8 593 aa16.07■□□□□ 0.16
SMARCA2-208ENST00000382194 MSANTD4Q8NCY6 345 aa16.06■□□□□ 0.16
SMARCA2-208ENST00000382194 CNNM3Q8NE01 707 aa16.06■□□□□ 0.16
SMARCA2-208ENST00000382194 CFAP57Q96MR6 1250 aa16.06■□□□□ 0.16
SMARCA2-208ENST00000382194 BIN2Q9UBW5 565 aaPredicted RBP16.06■□□□□ 0.16
SMARCA2-208ENST00000382194 CASQ1P31415 396 aa16.06■□□□□ 0.16
SMARCA2-208ENST00000382194 GIMAP7Q8NHV1 300 aa16.06■□□□□ 0.16
SMARCA2-208ENST00000382194 JDP2Q8WYK2 163 aa16.06■□□□□ 0.16
SMARCA2-208ENST00000382194 POTEB2H3BUK9 544 aa16.06■□□□□ 0.16
SMARCA2-208ENST00000382194 ARL1P40616 181 aaPredicted RBP16.06■□□□□ 0.16
SMARCA2-208ENST00000382194 PRKCSHP14314 528 aaPredicted RBP16.06■□□□□ 0.16
SMARCA2-208ENST00000382194 IFNL2Q8IZJ0 200 aa16.05■□□□□ 0.16
SMARCA2-208ENST00000382194 SPECC1LQ69YQ0 1117 aa16.05■□□□□ 0.16
SMARCA2-208ENST00000382194 BMP15O95972 392 aa16.05■□□□□ 0.16
SMARCA2-208ENST00000382194 BOLA2Q9H3K6 86 aa16.05■□□□□ 0.16
SMARCA2-208ENST00000382194 PRPHP41219 470 aa16.05■□□□□ 0.16
SMARCA2-208ENST00000382194 PRPF40BQ6NWY9 871 aaKnown RBP16.05■□□□□ 0.16
SMARCA2-208ENST00000382194 CWC25Q9NXE8 425 aaPredicted RBP16.05■□□□□ 0.16
SMARCA2-208ENST00000382194 GNAQP50148 359 aa16.05■□□□□ 0.16
SMARCA2-208ENST00000382194 CADPS2Q86UW7 1296 aa16.05■□□□□ 0.16
SMARCA2-208ENST00000382194 CCDC14Q49A88 953 aa16.04■□□□□ 0.16
SMARCA2-208ENST00000382194 LDHAL6AQ6ZMR3 332 aa16.04■□□□□ 0.16
SMARCA2-208ENST00000382194 DNAAF4Q8WXU2 420 aa16.04■□□□□ 0.16
SMARCA2-208ENST00000382194 MFSD6Q6ZSS7 791 aa16.04■□□□□ 0.16
SMARCA2-208ENST00000382194 OTUD6BQ8N6M0 293 aa16.04■□□□□ 0.16
SMARCA2-208ENST00000382194 RMND1Q9NWS8 449 aa16.04■□□□□ 0.16
SMARCA2-208ENST00000382194 IARSP41252 1262 aaKnown RBP16.04■□□□□ 0.16
SMARCA2-208ENST00000382194 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.04■□□□□ 0.161e-6■■■■□ 21.7
SMARCA2-208ENST00000382194 VAT1LQ9HCJ6 419 aa16.03■□□□□ 0.16
SMARCA2-208ENST00000382194 TNNT1P13805 278 aa16.03■□□□□ 0.16
SMARCA2-208ENST00000382194 TMEM67Q5HYA8 995 aa16.03■□□□□ 0.16
SMARCA2-208ENST00000382194 EHBP1Q8NDI1 1231 aa16.03■□□□□ 0.16
SMARCA2-208ENST00000382194 IQCGQ9H095 443 aaKnown RBP16.03■□□□□ 0.16
SMARCA2-208ENST00000382194 BRDTQ58F21 947 aaPredicted RBP16.03■□□□□ 0.16
SMARCA2-208ENST00000382194 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.03■□□□□ 0.16
SMARCA2-208ENST00000382194 V9GYY5 206 aaPredicted RBP16.03■□□□□ 0.16
SMARCA2-208ENST00000382194 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.168e-9■■■■■ 47.5
SMARCA2-208ENST00000382194 HLTFQ14527 1009 aaKnown RBP eCLIP16.03■□□□□ 0.16
SMARCA2-208ENST00000382194 C9orf84Q5VXU9 1444 aa16.03■□□□□ 0.16
SMARCA2-208ENST00000382194 ABCC11Q96J66 1382 aa16.02■□□□□ 0.16
SMARCA2-208ENST00000382194 PRPF4BQ13523 1007 aaKnown RBP16.02■□□□□ 0.16
SMARCA2-208ENST00000382194 SNX16P57768 344 aa16.02■□□□□ 0.15
SMARCA2-208ENST00000382194 KIAA0753Q2KHM9 967 aa16.02■□□□□ 0.15
SMARCA2-208ENST00000382194 SETDB2Q96T68 719 aa16.02■□□□□ 0.15
SMARCA2-208ENST00000382194 FAM107BQ9H098 131 aa16.02■□□□□ 0.15
SMARCA2-208ENST00000382194 GOLGA6L9A6NEM1 432 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms