RNA–Protein interactions for RNA: ENST00000375041.6

TRO-204, Transcript of trophinin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRO, Length 3,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-204ENST00000375041 SUCLG2Q96I99 432 aa12.22□□□□□ -0.45
TRO-204ENST00000375041 BICC1Q9H694 974 aaKnown RBP12.22□□□□□ -0.45
TRO-204ENST00000375041 STAP2Q9UGK3 403 aa12.22□□□□□ -0.45
TRO-204ENST00000375041 XAGE3Q8WTP9 111 aa12.21□□□□□ -0.45
TRO-204ENST00000375041 HOXB7P09629 217 aa12.21□□□□□ -0.45
TRO-204ENST00000375041 EDC3Q96F86 508 aaKnown RBP12.21□□□□□ -0.45
TRO-204ENST00000375041 RGPD5Q99666 1765 aa12.21□□□□□ -0.46
TRO-204ENST00000375041 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.46
TRO-204ENST00000375041 PTCD1O75127 700 aaKnown RBP12.21□□□□□ -0.46
TRO-204ENST00000375041 FAM173BQ6P4H8 233 aa12.21□□□□□ -0.46
TRO-204ENST00000375041 MYD88Q99836 296 aa12.21□□□□□ -0.46
TRO-204ENST00000375041 NPHP3Q7Z494 1330 aa12.21□□□□□ -0.46
TRO-204ENST00000375041 FIBPO43427 364 aa12.2□□□□□ -0.46
TRO-204ENST00000375041 RAB11FIP3O75154 756 aa12.2□□□□□ -0.46
TRO-204ENST00000375041 MCCP23508 829 aa12.2□□□□□ -0.46
TRO-204ENST00000375041 PDIA6Q15084 440 aa12.2□□□□□ -0.46
TRO-204ENST00000375041 FERMT3Q86UX7 667 aa12.2□□□□□ -0.46
TRO-204ENST00000375041 AACSQ86V21 672 aa12.2□□□□□ -0.46
TRO-204ENST00000375041 RASEFQ8IZ41 740 aa12.2□□□□□ -0.46
TRO-204ENST00000375041 CLASRPQ8N2M8 674 aaKnown RBP12.2□□□□□ -0.46
TRO-204ENST00000375041 IFIT2P09913 472 aaKnown RBP12.2□□□□□ -0.46
TRO-204ENST00000375041 PHKG2P15735 406 aa12.2□□□□□ -0.46
TRO-204ENST00000375041 NECAB1Q8N987 351 aa12.2□□□□□ -0.46
TRO-204ENST00000375041 KAZALD1Q96I82 304 aa12.2□□□□□ -0.46
TRO-204ENST00000375041 SLC52A2Q9HAB3 445 aa12.2□□□□□ -0.46
TRO-204ENST00000375041 GRM8O00222 908 aa12.2□□□□□ -0.46
TRO-204ENST00000375041 IGKV5-2P06315 115 aa12.2□□□□□ -0.46
TRO-204ENST00000375041 KCNJ4P48050 445 aa12.2□□□□□ -0.46
TRO-204ENST00000375041 CYP27B1O15528 508 aa12.19□□□□□ -0.46
TRO-204ENST00000375041 C17orf53Q8N3J3 647 aaPredicted RBP12.19□□□□□ -0.46
TRO-204ENST00000375041 DDX21Q9NR30 783 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRO-204ENST00000375041 HYPKQ9NX55 129 aa12.19□□□□□ -0.46
TRO-204ENST00000375041 TLR7Q9NYK1 1049 aaKnown RBP12.19□□□□□ -0.46
TRO-204ENST00000375041 NUCB2P80303 420 aa12.19□□□□□ -0.46
TRO-204ENST00000375041 STK3Q13188 491 aa12.19□□□□□ -0.46
TRO-204ENST00000375041 KLHL40Q2TBA0 621 aa12.19□□□□□ -0.46
TRO-204ENST00000375041 TTC5Q8N0Z6 440 aa12.19□□□□□ -0.46
TRO-204ENST00000375041 PTMAP06454 111 aaKnown RBP12.19□□□□□ -0.46
TRO-204ENST00000375041 CNTROBQ8N137 903 aa12.19□□□□□ -0.46
TRO-204ENST00000375041 ZNF330Q9Y3S2 320 aaPredicted RBP12.19□□□□□ -0.46
TRO-204ENST00000375041 ADAMTSL3P82987 1691 aa12.18□□□□□ -0.46
TRO-204ENST00000375041 LARGE1O95461 756 aa12.18□□□□□ -0.46
TRO-204ENST00000375041 SKOR2Q2VWA4 1001 aaPredicted RBP12.18□□□□□ -0.46
TRO-204ENST00000375041 EPHA10Q5JZY3 1008 aa12.18□□□□□ -0.46
TRO-204ENST00000375041 CNPY2Q9Y2B0 182 aa12.18□□□□□ -0.46
TRO-204ENST00000375041 R3HCC1Q9Y3T6 440 aaKnown RBP12.18□□□□□ -0.46
TRO-204ENST00000375041 DDX58O95786 925 aaKnown RBP12.18□□□□□ -0.46
TRO-204ENST00000375041 LINS1Q8NG48 757 aa12.18□□□□□ -0.46
TRO-204ENST00000375041 PXDNLA1KZ92 1463 aa12.18□□□□□ -0.46
TRO-204ENST00000375041 PRPF40BQ6NWY9 871 aaKnown RBP12.17□□□□□ -0.46
TRO-204ENST00000375041 CCDC83Q8IWF9 413 aa12.17□□□□□ -0.46
TRO-204ENST00000375041 IFNL2Q8IZJ0 200 aa12.17□□□□□ -0.46
TRO-204ENST00000375041 BOLA2Q9H3K6 86 aa12.17□□□□□ -0.46
TRO-204ENST00000375041 DIAPH3Q9NSV4 1193 aa12.17□□□□□ -0.46
TRO-204ENST00000375041 MEGF6O75095 1541 aa12.17□□□□□ -0.46
TRO-204ENST00000375041 VPS37CA5D8V6 355 aaPredicted RBP12.17□□□□□ -0.46
TRO-204ENST00000375041 FAM177BA6PVY3 158 aa12.17□□□□□ -0.46
TRO-204ENST00000375041 SASH1O94885 1247 aa12.17□□□□□ -0.46
TRO-204ENST00000375041 MSNP26038 577 aaKnown RBP12.17□□□□□ -0.46
TRO-204ENST00000375041 EAF2Q96CJ1 260 aaPredicted RBP12.17□□□□□ -0.46
TRO-204ENST00000375041 KDM6AO15550 1401 aaPredicted RBP12.17□□□□□ -0.46
TRO-204ENST00000375041 ZNF142P52746 1687 aaPredicted RBP12.17□□□□□ -0.46
TRO-204ENST00000375041 CASTP20810 708 aaKnown RBP12.17□□□□□ -0.46
TRO-204ENST00000375041 G3BP1Q13283 466 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRO-204ENST00000375041 SLFNL1Q499Z3 407 aa12.17□□□□□ -0.46
TRO-204ENST00000375041 KIAA1211Q6ZU35 1233 aa12.17□□□□□ -0.46
TRO-204ENST00000375041 STRN4Q9NRL3 753 aa12.17□□□□□ -0.46
TRO-204ENST00000375041 MED1Q15648 1581 aaPredicted RBP12.17□□□□□ -0.46
TRO-204ENST00000375041 SGSM2O43147 1006 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 CACNA1FO60840 1977 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 CABP4P57796 275 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 PTH1RQ03431 593 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 NEXNQ0ZGT2 675 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 ADCK5Q3MIX3 580 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 USP54Q70EL1 1684 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 UBE3BQ7Z3V4 1068 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 ALDH1L1O75891 902 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 CLCN1P35523 988 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 KDM3BQ7LBC6 1761 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 SLIT3O75094 1523 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 HSP90AB4PQ58FF6 505 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 ANKRD13DQ6ZTN6 518 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 TOM1L2Q6ZVM7 507 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 FAM227BQ96M60 508 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 CHMP4AQ9BY43 222 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 ECHDC1Q9NTX5 307 aa12.16□□□□□ -0.46
TRO-204ENST00000375041 GLRX3O76003 335 aaKnown RBP12.15□□□□□ -0.46
TRO-204ENST00000375041 TSC1Q92574 1164 aa12.15□□□□□ -0.46
TRO-204ENST00000375041 PRDM11Q9NQV5 511 aa12.15□□□□□ -0.46
TRO-204ENST00000375041 NAP1L2Q9ULW6 460 aaPredicted RBP12.15□□□□□ -0.46
TRO-204ENST00000375041 TAF6LQ9Y6J9 622 aa12.15□□□□□ -0.46
TRO-204ENST00000375041 NEURL1BA8MQ27 555 aa12.15□□□□□ -0.46
TRO-204ENST00000375041 CYP2E1P05181 493 aaPredicted RBP12.15□□□□□ -0.46
TRO-204ENST00000375041 USP48Q86UV5 1035 aa12.15□□□□□ -0.46
TRO-204ENST00000375041 SNX14Q9Y5W7 946 aa12.15□□□□□ -0.46
TRO-204ENST00000375041 MST1RQ04912 1400 aa12.15□□□□□ -0.46
TRO-204ENST00000375041 HSPA4P34932 840 aa12.14□□□□□ -0.47
TRO-204ENST00000375041 AK2P54819 239 aa12.14□□□□□ -0.47
TRO-204ENST00000375041 CADPS2Q86UW7 1296 aa12.14□□□□□ -0.47
TRO-204ENST00000375041 JAKMIP1Q96N16 626 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms