RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 TCP11L1Q9NUJ3 509 aa12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 ENOX2Q16206 610 aaKnown RBP12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 CALML4Q96GE6 196 aa12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 LIMCH1Q9UPQ0 1083 aa12.87□□□□□ -0.35
PHACTR4-202ENST00000373839 ZBTB3Q9H5J0 574 aa12.86□□□□□ -0.35
PHACTR4-202ENST00000373839 CACNA2D4Q7Z3S7 1137 aa12.86□□□□□ -0.35
PHACTR4-202ENST00000373839 TMEM87AQ8NBN3 555 aa12.86□□□□□ -0.35
PHACTR4-202ENST00000373839 KIAA0754O94854 1291 aa12.86□□□□□ -0.35
PHACTR4-202ENST00000373839 SSR1P43307 286 aaKnown RBP12.86□□□□□ -0.35
PHACTR4-202ENST00000373839 CCDC83Q8IWF9 413 aa12.86□□□□□ -0.35
PHACTR4-202ENST00000373839 BMP15O95972 392 aa12.86□□□□□ -0.35
PHACTR4-202ENST00000373839 NBPF6Q5VWK0 638 aa12.86□□□□□ -0.35
PHACTR4-202ENST00000373839 NBPF5PQ86XG9 351 aaPredicted RBP12.86□□□□□ -0.35
PHACTR4-202ENST00000373839 NBPF4Q96M43 638 aa12.86□□□□□ -0.35
PHACTR4-202ENST00000373839 KAT14Q9H8E8 782 aa12.86□□□□□ -0.35
PHACTR4-202ENST00000373839 UHRF1BP1LA0JNW5 1464 aa12.85□□□□□ -0.35
PHACTR4-202ENST00000373839 SFPQP23246 707 aaKnown RBP eCLIP12.85□□□□□ -0.35
PHACTR4-202ENST00000373839 PAXIP1Q6ZW49 1069 aaPredicted RBP12.85□□□□□ -0.35
PHACTR4-202ENST00000373839 ACEP12821 1306 aa12.85□□□□□ -0.35
PHACTR4-202ENST00000373839 KANK3Q6NY19 840 aa12.85□□□□□ -0.35
PHACTR4-202ENST00000373839 CCDC8Q9H0W5 538 aaPredicted RBP12.85□□□□□ -0.35
PHACTR4-202ENST00000373839 B4DLN1 442 aa12.85□□□□□ -0.35
PHACTR4-202ENST00000373839 MCM3P25205 808 aa12.85□□□□□ -0.35
PHACTR4-202ENST00000373839 MRPL12P52815 198 aaKnown RBP12.85□□□□□ -0.35
PHACTR4-202ENST00000373839 TMTC2Q8N394 836 aa12.85□□□□□ -0.35
PHACTR4-202ENST00000373839 MAP3K2Q9Y2U5 619 aa12.85□□□□□ -0.35
PHACTR4-202ENST00000373839 FAM114A1Q8IWE2 563 aa12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 PCF11O94913 1555 aaKnown RBP12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 TSPY2A6NKD2 308 aa12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 GPTP24298 496 aa12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 IARSP41252 1262 aaKnown RBP12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 CEBPAP49715 358 aaPredicted RBP12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 SKIDA1Q1XH10 827 aa12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 ZCRB1Q8TBF4 217 aaKnown RBP12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 ARHGAP45Q92619 1136 aa12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 MCM4P33991 863 aa12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 GNAQP50148 359 aa12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 USO1O60763 962 aaKnown RBP12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 ALDH1L1O75891 902 aa12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 MFSD6Q6ZSS7 791 aa12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 NCOA7Q8NI08 942 aa12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 DDX19AQ9NUU7 478 aaKnown RBP12.84□□□□□ -0.35
PHACTR4-202ENST00000373839 ANAPC15P60006 121 aa12.83□□□□□ -0.35
PHACTR4-202ENST00000373839 CCDC91Q7Z6B0 441 aa12.83□□□□□ -0.35
PHACTR4-202ENST00000373839 NYXQ9GZU5 481 aa12.83□□□□□ -0.35
PHACTR4-202ENST00000373839 GRPEL1Q9HAV7 217 aa12.83□□□□□ -0.35
PHACTR4-202ENST00000373839 RALGAPBQ86X10 1494 aa12.83□□□□□ -0.36
PHACTR4-202ENST00000373839 NBPF7P0C2Y1 421 aaPredicted RBP12.83□□□□□ -0.36
PHACTR4-202ENST00000373839 USP37Q86T82 979 aa12.83□□□□□ -0.36
PHACTR4-202ENST00000373839 ERMNQ8TAM6 284 aa12.83□□□□□ -0.36
PHACTR4-202ENST00000373839 ANKRD13DQ6ZTN6 518 aa12.83□□□□□ -0.36
PHACTR4-202ENST00000373839 FILIP1Q7Z7B0 1213 aa12.83□□□□□ -0.36
PHACTR4-202ENST00000373839 CAVIN2O95810 425 aa12.83□□□□□ -0.36
PHACTR4-202ENST00000373839 CCDC183Q5T5S1 534 aa12.83□□□□□ -0.36
PHACTR4-202ENST00000373839 ZNF622Q969S3 477 aaKnown RBP eCLIP12.83□□□□□ -0.361e-8■■■■□ 19.3
PHACTR4-202ENST00000373839 KDM5BQ9UGL1 1544 aa12.83□□□□□ -0.36
PHACTR4-202ENST00000373839 NLRP3Q96P20 1036 aa12.82□□□□□ -0.36
PHACTR4-202ENST00000373839 KRT23Q9C075 422 aa12.82□□□□□ -0.36
PHACTR4-202ENST00000373839 UBA5Q9GZZ9 404 aa12.82□□□□□ -0.36
PHACTR4-202ENST00000373839 PUS7Q96PZ0 661 aaKnown RBP12.82□□□□□ -0.36
PHACTR4-202ENST00000373839 SETDB2Q96T68 719 aa12.82□□□□□ -0.36
PHACTR4-202ENST00000373839 CNNM2Q9H8M5 875 aa12.82□□□□□ -0.36
PHACTR4-202ENST00000373839 TMEM67Q5HYA8 995 aa12.82□□□□□ -0.36
PHACTR4-202ENST00000373839 TAX1BP1Q86VP1 789 aa12.82□□□□□ -0.36
PHACTR4-202ENST00000373839 RBM27Q9P2N5 1060 aaKnown RBP12.82□□□□□ -0.36
PHACTR4-202ENST00000373839 YEATS4O95619 227 aa12.82□□□□□ -0.36
PHACTR4-202ENST00000373839 UBE3BQ7Z3V4 1068 aa12.82□□□□□ -0.36
PHACTR4-202ENST00000373839 OGFOD1Q8N543 542 aa12.82□□□□□ -0.36
PHACTR4-202ENST00000373839 FERMT1Q9BQL6 677 aa12.82□□□□□ -0.36
PHACTR4-202ENST00000373839 UBAP1LF5GYI3 381 aa12.81□□□□□ -0.36
PHACTR4-202ENST00000373839 NEMFO60524 1076 aa12.81□□□□□ -0.36
PHACTR4-202ENST00000373839 MAP9Q49MG5 647 aa12.81□□□□□ -0.36
PHACTR4-202ENST00000373839 F6X3S4 739 aa12.81□□□□□ -0.36
PHACTR4-202ENST00000373839 CNNM3Q8NE01 707 aa12.81□□□□□ -0.36
PHACTR4-202ENST00000373839 KIF5CO60282 957 aa12.81□□□□□ -0.36
PHACTR4-202ENST00000373839 PDCL2Q8N4E4 241 aa12.81□□□□□ -0.36
PHACTR4-202ENST00000373839 CCDC172P0C7W6 258 aa12.81□□□□□ -0.36
PHACTR4-202ENST00000373839 NF2P35240 595 aa12.81□□□□□ -0.36
PHACTR4-202ENST00000373839 GOLIM4O00461 696 aa12.81□□□□□ -0.36
PHACTR4-202ENST00000373839 FERMT3Q86UX7 667 aa12.81□□□□□ -0.36
PHACTR4-202ENST00000373839 PLCG2P16885 1265 aa12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 UBA7P41226 1012 aa12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 TOP1P11387 765 aaKnown RBP12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 AKAP4Q5JQC9 854 aa12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 NBPF14Q5TI25 921 aa12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 UBXN4Q92575 508 aa12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 DDB1Q16531 1140 aa12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 HOOK3Q86VS8 718 aa12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 USP16Q9Y5T5 823 aa12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 PI4KAP2A4QPH2 592 aa12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 SMARCA5O60264 1052 aaPredicted RBP12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 POLD1P28340 1107 aa12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 PAFAH1B1P43034 410 aa12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 BMP2KLQ5H9B9 411 aa12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 PI4KAP1Q8N8J0 262 aa12.8□□□□□ -0.36
PHACTR4-202ENST00000373839 NUP160Q12769 1436 aa12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 ZNF804AQ7Z570 1209 aa12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 DRC1Q96MC2 740 aa12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 TAOK3Q9H2K8 898 aa12.79□□□□□ -0.36
PHACTR4-202ENST00000373839 IL15P40933 162 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms