RNA–Protein interactions for RNA: ENST00000373097.5

PCDH11X-206, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 9,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-206ENST00000373097 C6orf163Q5TEZ5 329 aa4.73□□□□□ -1.65
PCDH11X-206ENST00000373097 NBPF11Q86T75 865 aa4.73□□□□□ -1.65
PCDH11X-206ENST00000373097 FNBP4Q8N3X1 1017 aaPredicted RBP4.73□□□□□ -1.65
PCDH11X-206ENST00000373097 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.73□□□□□ -1.65
PCDH11X-206ENST00000373097 SYNCQ9H7C4 482 aa4.73□□□□□ -1.65
PCDH11X-206ENST00000373097 HSPA4P34932 840 aa4.73□□□□□ -1.65
PCDH11X-206ENST00000373097 RNF169Q8NCN4 708 aa4.73□□□□□ -1.65
PCDH11X-206ENST00000373097 UBXN4Q92575 508 aa4.73□□□□□ -1.65
PCDH11X-206ENST00000373097 MYH9P35579 1960 aaKnown RBP4.73□□□□□ -1.65
PCDH11X-206ENST00000373097 NLRP5P59047 1200 aa4.73□□□□□ -1.65
PCDH11X-206ENST00000373097 RUFY3Q7L099 469 aa4.73□□□□□ -1.65
PCDH11X-206ENST00000373097 KSR1Q8IVT5 923 aa4.73□□□□□ -1.65
PCDH11X-206ENST00000373097 ZFYVE1Q9HBF4 777 aa4.73□□□□□ -1.65
PCDH11X-206ENST00000373097 HDAC9Q9UKV0 1011 aa4.73□□□□□ -1.65
PCDH11X-206ENST00000373097 ZNF853P0CG23 659 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 SAFBQ15424 915 aaKnown RBP eCLIP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 DDX46Q7L014 1031 aaKnown RBP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 CCDC82Q8N4S0 544 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 CCDC63Q8NA47 563 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 C16orf45Q96MC5 204 aaPredicted RBP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 VEZTQ9HBM0 779 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 ZNF318Q5VUA4 2279 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 FKBP4Q02790 459 aaKnown RBP eCLIP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 LRRFIP1Q32MZ4 808 aaKnown RBP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 TMC2Q8TDI7 906 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 SIN3AQ96ST3 1273 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 TRMT1Q9NXH9 659 aaKnown RBP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 TERF2IPQ9NYB0 399 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 NOC2LQ9Y3T9 749 aaKnown RBP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 PRPF4BQ13523 1007 aaKnown RBP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 SLMAPQ14BN4 828 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 INF2Q27J81 1249 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 GBP6Q6ZN66 633 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 MRPL46Q9H2W6 279 aaKnown RBP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 RABGAP1Q9Y3P9 1069 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 EIF3AQ14152 1382 aaKnown RBP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 A0A1W2PRG0 241 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 TRAK2O60296 914 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 TXLNAP40222 546 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 SMC1BQ8NDV3 1235 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 FANCIQ9NVI1 1328 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 SMIM24O75264 130 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 IL1RL1Q01638 556 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 FAM47CQ5HY64 1035 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 SMC6Q96SB8 1091 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 TRAK1Q9UPV9 953 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 PRC1O43663 620 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 HMOX1P09601 288 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 IQCEQ6IPM2 695 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 CPLX2Q6PUV4 134 aaKnown RBP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 CCDC150Q8NCX0 1101 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 ACSBG1Q96GR2 724 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 ZSCAN32Q9NX65 697 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 PKD2L1Q9P0L9 805 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 SATB2Q9UPW6 733 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 POLR3DP05423 398 aaPredicted RBP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 MX2P20592 715 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 LARP1Q6PKG0 1096 aaKnown RBP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 RALYLQ86SE5 291 aaKnown RBP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 SKA2Q8WVK7 121 aaPredicted RBP4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 ABCF2Q9UG63 623 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 SUFUQ9UMX1 484 aa4.72□□□□□ -1.65
PCDH11X-206ENST00000373097 CAMK4Q16566 473 aa4.71□□□□□ -1.65
PCDH11X-206ENST00000373097 TMTC4Q5T4D3 741 aa4.71□□□□□ -1.65
PCDH11X-206ENST00000373097 RNF34Q969K3 372 aa4.71□□□□□ -1.65
PCDH11X-206ENST00000373097 NUCKS1Q9H1E3 243 aaKnown RBP4.71□□□□□ -1.65
PCDH11X-206ENST00000373097 CRCPO75575 148 aa4.71□□□□□ -1.65
PCDH11X-206ENST00000373097 SH3BGRP55822 239 aaPredicted RBP4.71□□□□□ -1.65
PCDH11X-206ENST00000373097 MAP9Q49MG5 647 aa4.71□□□□□ -1.65
PCDH11X-206ENST00000373097 HOOK3Q86VS8 718 aa4.71□□□□□ -1.65
PCDH11X-206ENST00000373097 NGLY1Q96IV0 654 aa4.71□□□□□ -1.65
PCDH11X-206ENST00000373097 TMOD2Q9NZR1 351 aa4.71□□□□□ -1.65
PCDH11X-206ENST00000373097 ZKSCAN1P17029 563 aaPredicted RBP4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 COG7P83436 770 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 BRD3Q15059 726 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 AFAP1Q8N556 730 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 RUFY2Q8WXA3 655 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 CFAP36Q96G28 342 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 TRIM35Q9UPQ4 493 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 GCOM1H8Y6P7 765 aaPredicted RBP4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 FLCNQ8NFG4 579 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 MRRFQ96E11 262 aaKnown RBP4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 RAD18Q9NS91 495 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 MYH11P35749 1972 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 WBP4O75554 376 aaKnown RBP4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 MYZAPP0CAP1 466 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 KIF22Q14807 665 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 ARHGAP29Q52LW3 1261 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 RABEP2Q9H5N1 569 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 ZPR1O75312 459 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 HARSP12081 509 aaKnown RBP4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 PPFIBP2Q8ND30 876 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 ERLEC1Q96DZ1 483 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 PSMD2Q13200 908 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 MICAL1Q8TDZ2 1067 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 TRIM6Q9C030 488 aaPredicted RBP4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 JAG2Q9Y219 1238 aa4.71□□□□□ -1.66
PCDH11X-206ENST00000373097 PDE6BP35913 854 aa4.7□□□□□ -1.66
PCDH11X-206ENST00000373097 MAP7D1Q3KQU3 841 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms