RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 SMARCE1Q969G3 411 aa15.78■□□□□ 0.12
PREX1-201ENST00000371941 EVI5LQ96CN4 794 aa15.78■□□□□ 0.12
PREX1-201ENST00000371941 CENPHQ9H3R5 247 aa15.78■□□□□ 0.12
PREX1-201ENST00000371941 SLC3A2P08195 630 aaKnown RBP15.78■□□□□ 0.12
PREX1-201ENST00000371941 PDCL2Q8N4E4 241 aa15.78■□□□□ 0.12
PREX1-201ENST00000371941 ZNF219Q9P2Y4 722 aaPredicted RBP15.78■□□□□ 0.12
PREX1-201ENST00000371941 PBRM1Q86U86 1689 aa15.78■□□□□ 0.12
PREX1-201ENST00000371941 IFIT5Q13325 482 aaKnown RBP15.78■□□□□ 0.12
PREX1-201ENST00000371941 COPS6Q7L5N1 327 aa15.78■□□□□ 0.12
PREX1-201ENST00000371941 ANKRD44Q8N8A2 993 aa15.78■□□□□ 0.12
PREX1-201ENST00000371941 ADAMTS12P58397 1594 aa15.78■□□□□ 0.12
PREX1-201ENST00000371941 MPHOSPH10O00566 681 aaKnown RBP15.78■□□□□ 0.12
PREX1-201ENST00000371941 TRMT1LQ7Z2T5 733 aaKnown RBP15.78■□□□□ 0.12
PREX1-201ENST00000371941 CHAMP1Q96JM3 812 aa15.78■□□□□ 0.12
PREX1-201ENST00000371941 ZFP91Q96JP5 570 aaPredicted RBP15.78■□□□□ 0.12
PREX1-201ENST00000371941 ASXL2Q76L83 1435 aa15.78■□□□□ 0.12
PREX1-201ENST00000371941 KLHDC4Q8TBB5 520 aa15.78■□□□□ 0.12
PREX1-201ENST00000371941 NAPBQ9H115 298 aa15.78■□□□□ 0.12
PREX1-201ENST00000371941 DEF6Q9H4E7 631 aa15.78■□□□□ 0.12
PREX1-201ENST00000371941 TTC12Q9H892 705 aaPredicted RBP15.78■□□□□ 0.12
PREX1-201ENST00000371941 DENND4BO75064 1496 aaPredicted RBP15.77■□□□□ 0.12
PREX1-201ENST00000371941 TEX14Q8IWB6 1497 aa15.77■□□□□ 0.12
PREX1-201ENST00000371941 ZSCAN29Q8IWY8 852 aaPredicted RBP15.77■□□□□ 0.12
PREX1-201ENST00000371941 CTNNA3Q9UI47 895 aa15.77■□□□□ 0.12
PREX1-201ENST00000371941 RBM8AQ9Y5S9 174 aaKnown RBP15.77■□□□□ 0.12
PREX1-201ENST00000371941 BRF1Q92994 677 aa15.77■□□□□ 0.11
PREX1-201ENST00000371941 HYPKQ9NX55 129 aa15.77■□□□□ 0.11
PREX1-201ENST00000371941 TRIM35Q9UPQ4 493 aa15.77■□□□□ 0.11
PREX1-201ENST00000371941 RXRAP19793 462 aa15.76■□□□□ 0.11
PREX1-201ENST00000371941 IGHMBP2P38935 993 aaKnown RBP15.76■□□□□ 0.11
PREX1-201ENST00000371941 AK7Q96M32 723 aa15.76■□□□□ 0.11
PREX1-201ENST00000371941 TMC6Q7Z403 805 aa15.76■□□□□ 0.11
PREX1-201ENST00000371941 STARD3NLO95772 234 aa15.76■□□□□ 0.11
PREX1-201ENST00000371941 TNNT1P13805 278 aa15.76■□□□□ 0.11
PREX1-201ENST00000371941 NEK1Q96PY6 1258 aa15.76■□□□□ 0.11
PREX1-201ENST00000371941 NMIQ13287 307 aaPredicted RBP15.76■□□□□ 0.11
PREX1-201ENST00000371941 ZSCAN25Q6NSZ9 544 aa15.75■□□□□ 0.11
PREX1-201ENST00000371941 ZSWIM4Q9H7M6 989 aa15.75■□□□□ 0.11
PREX1-201ENST00000371941 KDM2BQ8NHM5 1336 aa15.75■□□□□ 0.11
PREX1-201ENST00000371941 IFIT3O14879 490 aaKnown RBP15.75■□□□□ 0.11
PREX1-201ENST00000371941 SETQ01105 290 aaPredicted RBP15.75■□□□□ 0.11
PREX1-201ENST00000371941 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.75■□□□□ 0.11
PREX1-201ENST00000371941 USP16Q9Y5T5 823 aa15.75■□□□□ 0.11
PREX1-201ENST00000371941 V9GYY5 206 aaPredicted RBP15.75■□□□□ 0.11
PREX1-201ENST00000371941 URI1O94763 535 aaPredicted RBP15.75■□□□□ 0.11
PREX1-201ENST00000371941 ACSBG1Q96GR2 724 aa15.75■□□□□ 0.11
PREX1-201ENST00000371941 SEPT11Q9NVA2 429 aaKnown RBP15.75■□□□□ 0.11
PREX1-201ENST00000371941 ABCC1P33527 1531 aa15.75■□□□□ 0.11
PREX1-201ENST00000371941 COL17A1Q9UMD9 1497 aaPredicted RBP15.75■□□□□ 0.11
PREX1-201ENST00000371941 PIK3R4Q99570 1358 aa15.75■□□□□ 0.11
PREX1-201ENST00000371941 ZSCAN22P10073 491 aaPredicted RBP15.75■□□□□ 0.11
PREX1-201ENST00000371941 PTPN14Q15678 1187 aa15.75■□□□□ 0.11
PREX1-201ENST00000371941 Q6ZUG5 572 aa15.75■□□□□ 0.11
PREX1-201ENST00000371941 ZBTB7BO15156 539 aaPredicted RBP15.74■□□□□ 0.11
PREX1-201ENST00000371941 POLR3GO15318 223 aaPredicted RBP15.74■□□□□ 0.11
PREX1-201ENST00000371941 AK2P54819 239 aa15.74■□□□□ 0.11
PREX1-201ENST00000371941 KLHL40Q2TBA0 621 aa15.74■□□□□ 0.11
PREX1-201ENST00000371941 ANO6Q4KMQ2 910 aa15.74■□□□□ 0.11
PREX1-201ENST00000371941 ZHX1Q9UKY1 873 aaPredicted RBP15.74■□□□□ 0.11
PREX1-201ENST00000371941 NSD2O96028 1365 aa15.74■□□□□ 0.11
PREX1-201ENST00000371941 SBNO2Q9Y2G9 1366 aa15.74■□□□□ 0.11
PREX1-201ENST00000371941 IL16Q14005 1332 aa15.74■□□□□ 0.11
PREX1-201ENST00000371941 ZMYM4Q5VZL5 1548 aa15.74■□□□□ 0.11
PREX1-201ENST00000371941 CCDC129Q6ZRS4 1044 aa15.74■□□□□ 0.11
PREX1-201ENST00000371941 NFATC2IPQ8NCF5 419 aa15.74■□□□□ 0.11
PREX1-201ENST00000371941 VAT1LQ9HCJ6 419 aa15.74■□□□□ 0.11
PREX1-201ENST00000371941 MARCKSP29966 332 aaPredicted RBP15.74■□□□□ 0.11
PREX1-201ENST00000371941 MAP7D2Q96T17 732 aa15.74■□□□□ 0.11
PREX1-201ENST00000371941 POLR3AO14802 1390 aaPredicted RBP15.74■□□□□ 0.11
PREX1-201ENST00000371941 AMOTQ4VCS5 1084 aa15.73■□□□□ 0.11
PREX1-201ENST00000371941 NOM1Q5C9Z4 860 aaKnown RBP15.73■□□□□ 0.11
PREX1-201ENST00000371941 LRSAM1Q6UWE0 723 aa15.73■□□□□ 0.11
PREX1-201ENST00000371941 EYA1Q99502 592 aa15.73■□□□□ 0.11
PREX1-201ENST00000371941 SH2B1Q9NRF2 756 aaPredicted RBP15.73■□□□□ 0.11
PREX1-201ENST00000371941 SLC12A7Q9Y666 1083 aa15.73■□□□□ 0.11
PREX1-201ENST00000371941 GOLGA8AA7E2F4 631 aa15.73■□□□□ 0.11
PREX1-201ENST00000371941 LDHAL6AQ6ZMR3 332 aa15.73■□□□□ 0.11
PREX1-201ENST00000371941 ABCC10Q5T3U5 1492 aa15.73■□□□□ 0.11
PREX1-201ENST00000371941 JAG2Q9Y219 1238 aa15.73■□□□□ 0.11
PREX1-201ENST00000371941 CDKL5O76039 1030 aa15.73■□□□□ 0.11
PREX1-201ENST00000371941 SLC26A6Q9BXS9 759 aa15.73■□□□□ 0.11
PREX1-201ENST00000371941 ANKRD13DQ6ZTN6 518 aa15.72■□□□□ 0.11
PREX1-201ENST00000371941 HELBQ8NG08 1087 aaPredicted RBP15.72■□□□□ 0.11
PREX1-201ENST00000371941 RRAGDQ9NQL2 400 aaPredicted RBP15.72■□□□□ 0.11
PREX1-201ENST00000371941 PPP4R3BQ5MIZ7 849 aa15.72■□□□□ 0.11
PREX1-201ENST00000371941 FAM173BQ6P4H8 233 aa15.72■□□□□ 0.11
PREX1-201ENST00000371941 ANKIB1Q9P2G1 1089 aa15.72■□□□□ 0.11
PREX1-201ENST00000371941 EIF2AK4Q9P2K8 1649 aaKnown RBP15.72■□□□□ 0.11
PREX1-201ENST00000371941 PRKCSHP14314 528 aaPredicted RBP15.72■□□□□ 0.11
PREX1-201ENST00000371941 ATP8B2P98198 1209 aa15.72■□□□□ 0.11
PREX1-201ENST00000371941 CNNM3Q8NE01 707 aa15.72■□□□□ 0.11
PREX1-201ENST00000371941 SOGA3Q5TF21 947 aa15.72■□□□□ 0.11
PREX1-201ENST00000371941 DNAJC25Q9H1X3 360 aa15.72■□□□□ 0.11
PREX1-201ENST00000371941 C17orf53Q8N3J3 647 aaPredicted RBP15.71■□□□□ 0.11
PREX1-201ENST00000371941 SCAND2PQ9GZW5 306 aaPredicted RBP15.71■□□□□ 0.11
PREX1-201ENST00000371941 ZNF165P49910 485 aa15.71■□□□□ 0.11
PREX1-201ENST00000371941 USP26Q9BXU7 913 aa15.71■□□□□ 0.11
PREX1-201ENST00000371941 NOL7Q9UMY1 257 aaKnown RBP15.71■□□□□ 0.11
PREX1-201ENST00000371941 DDX17Q92841 729 aaKnown RBP15.71■□□□□ 0.11
PREX1-201ENST00000371941 ORC3Q9UBD5 711 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms