RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 FOXD4L6Q3SYB3 417 aaPredicted RBP10.81□□□□□ -0.68
SMYD3-201ENST00000366516 GIMAP6Q6P9H5 292 aa10.81□□□□□ -0.68
SMYD3-201ENST00000366516 FOXD4L3Q6VB84 417 aaPredicted RBP10.81□□□□□ -0.68
SMYD3-201ENST00000366516 SSH3Q8TE77 659 aa10.81□□□□□ -0.68
SMYD3-201ENST00000366516 GPATCH3Q96I76 525 aa10.81□□□□□ -0.68
SMYD3-201ENST00000366516 ZBTB12Q9Y330 459 aaPredicted RBP10.81□□□□□ -0.68
SMYD3-201ENST00000366516 CCDC66A2RUB6 948 aa10.8□□□□□ -0.68
SMYD3-201ENST00000366516 GOLGA6L4A6NEF3 574 aa10.8□□□□□ -0.68
SMYD3-201ENST00000366516 HIP1O00291 1037 aa10.8□□□□□ -0.68
SMYD3-201ENST00000366516 ZKSCAN1P17029 563 aaPredicted RBP10.8□□□□□ -0.68
SMYD3-201ENST00000366516 ATP2B3Q16720 1220 aa10.8□□□□□ -0.68
SMYD3-201ENST00000366516 RNF20Q5VTR2 975 aa10.8□□□□□ -0.68
SMYD3-201ENST00000366516 CCDC112Q8NEF3 446 aa10.8□□□□□ -0.68
SMYD3-201ENST00000366516 KCNF1Q9H3M0 494 aa10.8□□□□□ -0.68
SMYD3-201ENST00000366516 HDAC5Q9UQL6 1122 aa10.8□□□□□ -0.68
SMYD3-201ENST00000366516 MTMR6Q9Y217 621 aa10.8□□□□□ -0.68
SMYD3-201ENST00000366516 CYP46A1Q9Y6A2 500 aa10.8□□□□□ -0.68
SMYD3-201ENST00000366516 A2ML1A8K2U0 1454 aa10.8□□□□□ -0.68
SMYD3-201ENST00000366516 NPHP3Q7Z494 1330 aa10.8□□□□□ -0.68
SMYD3-201ENST00000366516 USP42Q9H9J4 1324 aaKnown RBP10.8□□□□□ -0.68
SMYD3-201ENST00000366516 KIF2AO00139 706 aaPredicted RBP10.79□□□□□ -0.68
SMYD3-201ENST00000366516 GLRX3O76003 335 aaKnown RBP10.79□□□□□ -0.68
SMYD3-201ENST00000366516 GJB2P29033 226 aa10.79□□□□□ -0.68
SMYD3-201ENST00000366516 HDGFP51858 240 aaKnown RBP10.79□□□□□ -0.68
SMYD3-201ENST00000366516 DHX8Q14562 1220 aaKnown RBP10.79□□□□□ -0.68
SMYD3-201ENST00000366516 ILDR2Q71H61 639 aa10.79□□□□□ -0.68
SMYD3-201ENST00000366516 LSG1Q9H089 658 aaKnown RBP10.79□□□□□ -0.68
SMYD3-201ENST00000366516 PYCARDQ9ULZ3 195 aa10.79□□□□□ -0.68
SMYD3-201ENST00000366516 KDRP35968 1356 aa10.79□□□□□ -0.68
SMYD3-201ENST00000366516 USP31Q70CQ4 1352 aa10.79□□□□□ -0.68
SMYD3-201ENST00000366516 PNMA6EA0A0J9YXQ4 647 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 F6X3S4 739 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 CASTP20810 708 aaKnown RBP10.78□□□□□ -0.68
SMYD3-201ENST00000366516 PSMA5P28066 241 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 TYRO3Q06418 890 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 TSHZ3Q63HK5 1081 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 RUFY3Q7L099 469 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 WAPLQ7Z5K2 1190 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 DRC7Q8IY82 874 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 TNMDQ9H2S6 317 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 PDRG1Q9NUG6 133 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 HYPKQ9NX55 129 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 TCHHQ07283 1943 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 DNM1Q05193 864 aaKnown RBP10.78□□□□□ -0.68
SMYD3-201ENST00000366516 PI4K2BQ8TCG2 481 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 CERKQ8TCT0 537 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 LRRFIP2Q9Y608 721 aaKnown RBP10.78□□□□□ -0.68
SMYD3-201ENST00000366516 FMN2Q9NZ56 1722 aa10.78□□□□□ -0.68
SMYD3-201ENST00000366516 NCBP1Q09161 790 aaKnown RBP10.77□□□□□ -0.69
SMYD3-201ENST00000366516 RBM43Q6ZSC3 357 aaKnown RBP10.77□□□□□ -0.69
SMYD3-201ENST00000366516 ZNF771Q7L3S4 317 aaPredicted RBP10.77□□□□□ -0.69
SMYD3-201ENST00000366516 C17orf53Q8N3J3 647 aaPredicted RBP10.77□□□□□ -0.69
SMYD3-201ENST00000366516 SPC24Q8NBT2 197 aa10.77□□□□□ -0.69
SMYD3-201ENST00000366516 TDRD7Q8NHU6 1098 aaKnown RBP10.77□□□□□ -0.69
SMYD3-201ENST00000366516 RHPN1Q8TCX5 695 aa10.77□□□□□ -0.69
SMYD3-201ENST00000366516 KCNB2Q92953 911 aa10.77□□□□□ -0.69
SMYD3-201ENST00000366516 ZSWIM6Q9HCJ5 1215 aa10.77□□□□□ -0.69
SMYD3-201ENST00000366516 FLT4P35916 1363 aa10.77□□□□□ -0.69
SMYD3-201ENST00000366516 TOPAZ1Q8N9V7 1692 aa10.77□□□□□ -0.69
SMYD3-201ENST00000366516 VPS37CA5D8V6 355 aaPredicted RBP10.76□□□□□ -0.69
SMYD3-201ENST00000366516 TNNT1P13805 278 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 U2AF2P26368 475 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMYD3-201ENST00000366516 G2E3Q7L622 706 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 PLA2G4DQ86XP0 818 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 ERC1Q8IUD2 1116 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 UNC5CLQ8IV45 518 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 TRIM5Q9C035 493 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 DDX41Q9UJV9 622 aaKnown RBP10.76□□□□□ -0.69
SMYD3-201ENST00000366516 SBNO1A3KN83 1393 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 AGLP35573 1532 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 ZBTB7CA1YPR0 619 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 CTAGE5O15320 804 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 SURF6O75683 361 aaKnown RBP10.76□□□□□ -0.69
SMYD3-201ENST00000366516 TUBB4AP04350 444 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 PTGS1P23219 599 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 ZNF75DP51815 510 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 SLFNL1Q499Z3 407 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 CCDC83Q8IWF9 413 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 TSC1Q92574 1164 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 CTNNA3Q9UI47 895 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 MRVI1Q9Y6F6 885 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 TTC21AQ8NDW8 1320 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 NRXN3Q9Y4C0 1643 aa10.76□□□□□ -0.69
SMYD3-201ENST00000366516 RAPGEF3O95398 923 aa10.75□□□□□ -0.69
SMYD3-201ENST00000366516 TPD52L1Q16890 204 aaPredicted RBP10.75□□□□□ -0.69
SMYD3-201ENST00000366516 LARP1BQ659C4 914 aaKnown RBP10.75□□□□□ -0.69
SMYD3-201ENST00000366516 ZSCAN25Q6NSZ9 544 aa10.75□□□□□ -0.69
SMYD3-201ENST00000366516 SARM1Q6SZW1 724 aa10.75□□□□□ -0.69
SMYD3-201ENST00000366516 CCDC186Q7Z3E2 898 aa10.75□□□□□ -0.69
SMYD3-201ENST00000366516 KRT222Q8N1A0 295 aa10.75□□□□□ -0.69
SMYD3-201ENST00000366516 MPNDQ8N594 471 aa10.75□□□□□ -0.69
SMYD3-201ENST00000366516 ZNF397Q8NF99 534 aaPredicted RBP10.75□□□□□ -0.69
SMYD3-201ENST00000366516 JAKMIP1Q96N16 626 aaKnown RBP10.75□□□□□ -0.69
SMYD3-201ENST00000366516 ALDH8A1Q9H2A2 487 aaPredicted RBP10.75□□□□□ -0.69
SMYD3-201ENST00000366516 CLSTN2Q9H4D0 955 aa10.75□□□□□ -0.69
SMYD3-201ENST00000366516 ZRANB1Q9UGI0 708 aa10.75□□□□□ -0.69
SMYD3-201ENST00000366516 MORC2Q9Y6X9 1032 aaPredicted RBP10.75□□□□□ -0.69
SMYD3-201ENST00000366516 PEAK1Q9H792 1746 aa10.75□□□□□ -0.69
SMYD3-201ENST00000366516 USP6P35125 1406 aa10.74□□□□□ -0.69
SMYD3-201ENST00000366516 SPDYE4A6NLX3 237 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms