RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 TRERF1Q96PN7 1200 aa9.14□□□□□ -0.95
RNU4-28P-201ENST00000364739 HCN2Q9UL51 889 aa9.14□□□□□ -0.95
RNU4-28P-201ENST00000364739 CHMP3Q9Y3E7 222 aa9.14□□□□□ -0.95
RNU4-28P-201ENST00000364739 ELOAQ14241 798 aaKnown RBP9.13□□□□□ -0.95
RNU4-28P-201ENST00000364739 GJA3Q9Y6H8 435 aa9.13□□□□□ -0.95
RNU4-28P-201ENST00000364739 DCDC2BA2VCK2 349 aa9.12□□□□□ -0.95
RNU4-28P-201ENST00000364739 WEE1P30291 646 aa9.12□□□□□ -0.95
RNU4-28P-201ENST00000364739 IRS1P35568 1242 aa9.12□□□□□ -0.95
RNU4-28P-201ENST00000364739 MARSP56192 900 aaKnown RBP9.12□□□□□ -0.95
RNU4-28P-201ENST00000364739 ALDH16A1Q8IZ83 802 aa9.12□□□□□ -0.95
RNU4-28P-201ENST00000364739 RHPN1Q8TCX5 695 aa9.12□□□□□ -0.95
RNU4-28P-201ENST00000364739 SCARF2Q96GP6 870 aaPredicted RBP9.12□□□□□ -0.95
RNU4-28P-201ENST00000364739 ACIN1Q9UKV3 1341 aaKnown RBP9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 CARNS1A5YM72 827 aa9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 ATXN7O15265 892 aaPredicted RBP9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 ADAMTS2O95450 1211 aa9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 MX2P20592 715 aa9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 IGFBP4P22692 258 aa9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 CTBSQ01459 385 aa9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 LBRQ14739 615 aaKnown RBP9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 POTEAQ6S8J7 498 aa9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 NLRP8Q86W28 1048 aa9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 ZNF280CQ8ND82 737 aa9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 HSH2DQ96JZ2 352 aa9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 NDFIP2Q9NV92 336 aa9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 SLAIN2Q9P270 581 aa9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 PCDHGC4Q9Y5F7 938 aa9.11□□□□□ -0.95
RNU4-28P-201ENST00000364739 KHNYNO15037 678 aaKnown RBP9.1□□□□□ -0.95
RNU4-28P-201ENST00000364739 HIRAP54198 1017 aaPredicted RBP9.1□□□□□ -0.95
RNU4-28P-201ENST00000364739 CFHR5Q9BXR6 569 aa9.1□□□□□ -0.95
RNU4-28P-201ENST00000364739 NEUROD4Q9HD90 331 aa9.1□□□□□ -0.95
RNU4-28P-201ENST00000364739 MBIPQ9NS73 344 aa9.1□□□□□ -0.95
RNU4-28P-201ENST00000364739 IGF1RP08069 1367 aa9.1□□□□□ -0.95
RNU4-28P-201ENST00000364739 C2CD2LO14523 706 aa9.09□□□□□ -0.95
RNU4-28P-201ENST00000364739 SRSF11Q05519 484 aaKnown RBP9.09□□□□□ -0.95
RNU4-28P-201ENST00000364739 GPAT2Q6NUI2 795 aa9.09□□□□□ -0.95
RNU4-28P-201ENST00000364739 STAG2Q8N3U4 1231 aa9.09□□□□□ -0.95
RNU4-28P-201ENST00000364739 MAPTP10636 758 aaKnown RBP9.08□□□□□ -0.96
RNU4-28P-201ENST00000364739 FGFR3P22607 806 aa9.08□□□□□ -0.96
RNU4-28P-201ENST00000364739 TNP2Q05952 138 aa9.08□□□□□ -0.96
RNU4-28P-201ENST00000364739 FKBP5Q13451 457 aaPredicted RBP9.08□□□□□ -0.96
RNU4-28P-201ENST00000364739 GRIN2CQ14957 1233 aa9.08□□□□□ -0.96
RNU4-28P-201ENST00000364739 OCLNQ16625 522 aa9.08□□□□□ -0.96
RNU4-28P-201ENST00000364739 C1orf53Q5VUE5 145 aa9.08□□□□□ -0.96
RNU4-28P-201ENST00000364739 FIGNL1Q6PIW4 674 aa9.08□□□□□ -0.96
RNU4-28P-201ENST00000364739 LYPD4Q6UWN0 246 aa9.08□□□□□ -0.96
RNU4-28P-201ENST00000364739 CAPN12Q6ZSI9 719 aa9.08□□□□□ -0.96
RNU4-28P-201ENST00000364739 STRN4Q9NRL3 753 aa9.08□□□□□ -0.96
RNU4-28P-201ENST00000364739 CD33P20138 364 aa9.07□□□□□ -0.96
RNU4-28P-201ENST00000364739 MAP3K10Q02779 954 aa9.07□□□□□ -0.96
RNU4-28P-201ENST00000364739 SWI5Q1ZZU3 235 aa9.07□□□□□ -0.96
RNU4-28P-201ENST00000364739 SUSD3Q96L08 255 aa9.07□□□□□ -0.96
RNU4-28P-201ENST00000364739 KLK14Q9P0G3 267 aa9.07□□□□□ -0.96
RNU4-28P-201ENST00000364739 ATXN7L1Q9ULK2 861 aaPredicted RBP9.07□□□□□ -0.96
RNU4-28P-201ENST00000364739 PHF24Q9UPV7 400 aa9.07□□□□□ -0.96
RNU4-28P-201ENST00000364739 MKNK1Q9BUB5 465 aa9.06□□□□□ -0.96
RNU4-28P-201ENST00000364739 SCNN1AP37088 669 aa9.05□□□□□ -0.96
RNU4-28P-201ENST00000364739 SFSWAPQ12872 951 aaKnown RBP9.05□□□□□ -0.96
RNU4-28P-201ENST00000364739 VTI1AQ96AJ9 217 aa9.05□□□□□ -0.96
RNU4-28P-201ENST00000364739 ACDQ96AP0 544 aa9.05□□□□□ -0.96
RNU4-28P-201ENST00000364739 QTRT2Q9H974 415 aaKnown RBP9.05□□□□□ -0.96
RNU4-28P-201ENST00000364739 FOXO3O43524 673 aa9.04□□□□□ -0.96
RNU4-28P-201ENST00000364739 PPP1R15AO75807 674 aaPredicted RBP9.04□□□□□ -0.96
RNU4-28P-201ENST00000364739 CELA2BP08218 269 aaPredicted RBP9.04□□□□□ -0.96
RNU4-28P-201ENST00000364739 BMP4P12644 408 aa9.04□□□□□ -0.96
RNU4-28P-201ENST00000364739 CEP63Q96MT8 703 aa9.04□□□□□ -0.96
RNU4-28P-201ENST00000364739 ENAMQ9NRM1 1142 aa9.04□□□□□ -0.96
RNU4-28P-201ENST00000364739 BCS1LQ9Y276 419 aa9.04□□□□□ -0.96
RNU4-28P-201ENST00000364739 NAA30Q147X3 362 aaPredicted RBP9.03□□□□□ -0.96
RNU4-28P-201ENST00000364739 RTN1Q16799 776 aa9.03□□□□□ -0.96
RNU4-28P-201ENST00000364739 CXXC1Q9P0U4 656 aaPredicted RBP9.03□□□□□ -0.96
RNU4-28P-201ENST00000364739 LRFN2Q9ULH4 789 aa9.03□□□□□ -0.96
RNU4-28P-201ENST00000364739 TMEM88BA6NKF7 163 aa9.02□□□□□ -0.97
RNU4-28P-201ENST00000364739 EFSO43281 561 aa9.02□□□□□ -0.97
RNU4-28P-201ENST00000364739 FAM157BP0CG42 384 aa9.02□□□□□ -0.97
RNU4-28P-201ENST00000364739 DGKZQ13574 1117 aa9.02□□□□□ -0.97
RNU4-28P-201ENST00000364739 SAMD5Q5TGI4 173 aa9.02□□□□□ -0.97
RNU4-28P-201ENST00000364739 CLP1Q92989 425 aaKnown RBP9.02□□□□□ -0.97
RNU4-28P-201ENST00000364739 SAP130Q9H0E3 1048 aa9.02□□□□□ -0.97
RNU4-28P-201ENST00000364739 ANKIB1Q9P2G1 1089 aa9.02□□□□□ -0.97
RNU4-28P-201ENST00000364739 NSFL1CQ9UNZ2 370 aaKnown RBP9.02□□□□□ -0.97
RNU4-28P-201ENST00000364739 C1orf229Q6ZS94 237 aaPredicted RBP9.01□□□□□ -0.97
RNU4-28P-201ENST00000364739 MARK1Q9P0L2 795 aa9.01□□□□□ -0.97
RNU4-28P-201ENST00000364739 GPC6Q9Y625 555 aaPredicted RBP9.01□□□□□ -0.97
RNU4-28P-201ENST00000364739 PHF20L1A8MW92 1017 aa9□□□□□ -0.97
RNU4-28P-201ENST00000364739 ATP2B4P23634 1241 aa9□□□□□ -0.97
RNU4-28P-201ENST00000364739 COX20Q5RI15 118 aa9□□□□□ -0.97
RNU4-28P-201ENST00000364739 BTLAQ7Z6A9 289 aa9□□□□□ -0.97
RNU4-28P-201ENST00000364739 OXCT2Q9BYC2 517 aaPredicted RBP9□□□□□ -0.97
RNU4-28P-201ENST00000364739 BRD7Q9NPI1 651 aa9□□□□□ -0.97
RNU4-28P-201ENST00000364739 MAP2K3P46734 347 aa8.99□□□□□ -0.97
RNU4-28P-201ENST00000364739 PCBP4P57723 403 aaKnown RBP8.99□□□□□ -0.97
RNU4-28P-201ENST00000364739 TYRO3Q06418 890 aa8.99□□□□□ -0.97
RNU4-28P-201ENST00000364739 RAB44Q7Z6P3 723 aaPredicted RBP8.99□□□□□ -0.97
RNU4-28P-201ENST00000364739 SLC30A3Q99726 388 aa8.99□□□□□ -0.97
RNU4-28P-201ENST00000364739 KLF15Q9UIH9 416 aa8.99□□□□□ -0.97
RNU4-28P-201ENST00000364739 SEPT3Q9UH03 358 aa8.98□□□□□ -0.97
RNU4-28P-201ENST00000364739 DMGDHQ9UI17 866 aaKnown RBP8.98□□□□□ -0.97
RNU4-28P-201ENST00000364739 GGA1Q9UJY5 639 aa8.98□□□□□ -0.97
RNU4-28P-201ENST00000364739 NEURL1BA8MQ27 555 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms