RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 CALML4Q96GE6 196 aa19.84■□□□□ 0.77
CACNA1A-201ENST00000360228 EXOSC9Q06265 439 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-201ENST00000360228 GBP7Q8N8V2 638 aaPredicted RBP19.84■□□□□ 0.77
CACNA1A-201ENST00000360228 NACADO15069 1562 aa19.84■□□□□ 0.77
CACNA1A-201ENST00000360228 TTC31Q49AM3 519 aaPredicted RBP19.84■□□□□ 0.77
CACNA1A-201ENST00000360228 AKNAQ7Z591 1439 aa19.84■□□□□ 0.77
CACNA1A-201ENST00000360228 CTAGE5O15320 804 aa19.84■□□□□ 0.77
CACNA1A-201ENST00000360228 NAA25Q14CX7 972 aa19.84■□□□□ 0.77
CACNA1A-201ENST00000360228 TTC21AQ8NDW8 1320 aa19.84■□□□□ 0.77
CACNA1A-201ENST00000360228 RSPH14Q9UHP6 348 aa19.84■□□□□ 0.77
CACNA1A-201ENST00000360228 BICDL1Q6ZP65 573 aa19.83■□□□□ 0.77
CACNA1A-201ENST00000360228 SSRP1Q08945 709 aaKnown RBP19.83■□□□□ 0.77
CACNA1A-201ENST00000360228 ZMYND15Q9H091 742 aa19.83■□□□□ 0.77
CACNA1A-201ENST00000360228 TTC12Q9H892 705 aaPredicted RBP19.83■□□□□ 0.77
CACNA1A-201ENST00000360228 SLC12A7Q9Y666 1083 aa19.83■□□□□ 0.77
CACNA1A-201ENST00000360228 NAPBQ9H115 298 aa19.83■□□□□ 0.77
CACNA1A-201ENST00000360228 BTBD11A6QL63 1104 aa19.83■□□□□ 0.76
CACNA1A-201ENST00000360228 TACC1O75410 805 aa19.83■□□□□ 0.76
CACNA1A-201ENST00000360228 GMNNO75496 209 aa19.83■□□□□ 0.76
CACNA1A-201ENST00000360228 LRSAM1Q6UWE0 723 aa19.83■□□□□ 0.76
CACNA1A-201ENST00000360228 CCDC12Q8WUD4 166 aaPredicted RBP19.83■□□□□ 0.76
CACNA1A-201ENST00000360228 TCP11L2Q8N4U5 519 aa19.83■□□□□ 0.76
CACNA1A-201ENST00000360228 EHBP1Q8NDI1 1231 aa19.83■□□□□ 0.76
CACNA1A-201ENST00000360228 CEP126Q9P2H0 1117 aa19.83■□□□□ 0.76
CACNA1A-201ENST00000360228 STX1AQ16623 288 aa19.83■□□□□ 0.76
CACNA1A-201ENST00000360228 NBPF1Q3BBV0 1214 aa19.83■□□□□ 0.76
CACNA1A-201ENST00000360228 DYNC1I1O14576 645 aa19.82■□□□□ 0.76
CACNA1A-201ENST00000360228 CIZ1Q9ULV3 898 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-201ENST00000360228 BAG4O95429 457 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-201ENST00000360228 SNX16P57768 344 aa19.82■□□□□ 0.76
CACNA1A-201ENST00000360228 AMPD3Q01432 767 aa19.82■□□□□ 0.76
CACNA1A-201ENST00000360228 STMN4Q9H169 189 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-201ENST00000360228 RBM28Q9NW13 759 aaKnown RBP19.82■□□□□ 0.76
CACNA1A-201ENST00000360228 CTCFLQ8NI51 663 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-201ENST00000360228 SELENOOQ9BVL4 669 aa19.82■□□□□ 0.76
CACNA1A-201ENST00000360228 SCAND2PQ9GZW5 306 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-201ENST00000360228 KRT13P13646 458 aa19.82■□□□□ 0.76
CACNA1A-201ENST00000360228 TOM1L2Q6ZVM7 507 aa19.82■□□□□ 0.76
CACNA1A-201ENST00000360228 ISM2Q6H9L7 571 aa19.81■□□□□ 0.76
CACNA1A-201ENST00000360228 PPP1R9BQ96SB3 815 aa19.81■□□□□ 0.76
CACNA1A-201ENST00000360228 BRD4O60885 1362 aaPredicted RBP19.81■□□□□ 0.76
CACNA1A-201ENST00000360228 RANBP6O60518 1105 aaKnown RBP19.81■□□□□ 0.76
CACNA1A-201ENST00000360228 MAP3K9P80192 1104 aa19.81■□□□□ 0.76
CACNA1A-201ENST00000360228 KIF5AQ12840 1032 aa19.81■□□□□ 0.76
CACNA1A-201ENST00000360228 BIN1O00499 593 aa19.81■□□□□ 0.76
CACNA1A-201ENST00000360228 ATRIPQ8WXE1 791 aa19.81■□□□□ 0.76
CACNA1A-201ENST00000360228 METTL24Q5JXM2 366 aa19.81■□□□□ 0.76
CACNA1A-201ENST00000360228 STXBP4Q6ZWJ1 553 aa19.81■□□□□ 0.76
CACNA1A-201ENST00000360228 RNF216Q9NWF9 866 aaPredicted RBP19.81■□□□□ 0.76
CACNA1A-201ENST00000360228 A0A1B0GUA9 196 aa19.8■□□□□ 0.76
CACNA1A-201ENST00000360228 CAVIN4Q5BKX8 364 aa19.8■□□□□ 0.76
CACNA1A-201ENST00000360228 NLRP5P59047 1200 aa19.8■□□□□ 0.76
CACNA1A-201ENST00000360228 MCM6Q14566 821 aa19.8■□□□□ 0.76
CACNA1A-201ENST00000360228 GBP6Q6ZN66 633 aa19.8■□□□□ 0.76
CACNA1A-201ENST00000360228 CCDC121Q6ZUS5 278 aa19.8■□□□□ 0.76
CACNA1A-201ENST00000360228 MICALL1Q8N3F8 863 aa19.8■□□□□ 0.76
CACNA1A-201ENST00000360228 NEMFO60524 1076 aa19.8■□□□□ 0.76
CACNA1A-201ENST00000360228 CCDC194A0A1B0GVG4 234 aa19.8■□□□□ 0.76
CACNA1A-201ENST00000360228 STIM2Q9P246 746 aa19.8■□□□□ 0.76
CACNA1A-201ENST00000360228 SH2D4BQ5SQS7 431 aa19.79■□□□□ 0.76
CACNA1A-201ENST00000360228 CDCA7LQ96GN5 454 aa19.79■□□□□ 0.76
CACNA1A-201ENST00000360228 TUBB4BP68371 445 aa19.79■□□□□ 0.76
CACNA1A-201ENST00000360228 CFAP157Q5JU67 520 aa19.79■□□□□ 0.76
CACNA1A-201ENST00000360228 CCDC172P0C7W6 258 aa19.79■□□□□ 0.76
CACNA1A-201ENST00000360228 ERCC3P19447 782 aa19.79■□□□□ 0.76
CACNA1A-201ENST00000360228 SELENOSQ9BQE4 189 aa19.79■□□□□ 0.76
CACNA1A-201ENST00000360228 IQCA1Q86XH1 822 aa19.79■□□□□ 0.76
CACNA1A-201ENST00000360228 ARFGAP3Q9NP61 516 aa19.79■□□□□ 0.76
CACNA1A-201ENST00000360228 TCP11L1Q9NUJ3 509 aa19.79■□□□□ 0.76
CACNA1A-201ENST00000360228 IL1RAPL2Q9NP60 686 aa19.79■□□□□ 0.76
CACNA1A-201ENST00000360228 ZNF444Q8N0Y2 327 aaPredicted RBP19.79■□□□□ 0.76
CACNA1A-201ENST00000360228 UTP14AQ9BVJ6 771 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-201ENST00000360228 ADCY5O95622 1261 aa19.78■□□□□ 0.76
CACNA1A-201ENST00000360228 ARID4AP29374 1257 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-201ENST00000360228 PAXBP1Q9Y5B6 917 aa19.78■□□□□ 0.76
CACNA1A-201ENST00000360228 CFAP65Q6ZU64 1925 aaKnown RBP19.78■□□□□ 0.76
CACNA1A-201ENST00000360228 CATIPQ7Z7H3 387 aa19.78■□□□□ 0.76
CACNA1A-201ENST00000360228 TXNDC16Q9P2K2 825 aa19.78■□□□□ 0.76
CACNA1A-201ENST00000360228 PDE3AQ14432 1141 aa19.78■□□□□ 0.76
CACNA1A-201ENST00000360228 TTC14Q96N46 770 aa19.77■□□□□ 0.76
CACNA1A-201ENST00000360228 USP25Q9UHP3 1055 aa19.77■□□□□ 0.76
CACNA1A-201ENST00000360228 RFC1P35251 1148 aaPredicted RBP19.77■□□□□ 0.76
CACNA1A-201ENST00000360228 GNG11P61952 73 aa19.77■□□□□ 0.76
CACNA1A-201ENST00000360228 PLEKHH1Q9ULM0 1364 aa19.77■□□□□ 0.76
CACNA1A-201ENST00000360228 FSIP1Q8NA03 581 aa19.77■□□□□ 0.76
CACNA1A-201ENST00000360228 ZMAT2Q96NC0 199 aaKnown RBP19.77■□□□□ 0.76
CACNA1A-201ENST00000360228 SETD1BQ9UPS6 1966 aaKnown RBP19.77■□□□□ 0.76
CACNA1A-201ENST00000360228 GOLGA8BA8MQT2 603 aa19.77■□□□□ 0.75
CACNA1A-201ENST00000360228 PFDN4Q9NQP4 134 aa19.77■□□□□ 0.75
CACNA1A-201ENST00000360228 SPG7Q9UQ90 795 aa19.77■□□□□ 0.75
CACNA1A-201ENST00000360228 PPFIA2O75334 1257 aa19.77■□□□□ 0.75
CACNA1A-201ENST00000360228 ZBTB17Q13105 803 aa19.77■□□□□ 0.75
CACNA1A-201ENST00000360228 EXOC1Q9NV70 894 aa19.76■□□□□ 0.75
CACNA1A-201ENST00000360228 STMN1P16949 149 aa19.76■□□□□ 0.75
CACNA1A-201ENST00000360228 KRT222Q8N1A0 295 aa19.76■□□□□ 0.75
CACNA1A-201ENST00000360228 TRIM7Q9C029 511 aa19.76■□□□□ 0.75
CACNA1A-201ENST00000360228 NUTM2BA6NNL0 878 aaPredicted RBP19.76■□□□□ 0.75
CACNA1A-201ENST00000360228 NUTM2EB1AL46 878 aaPredicted RBP19.76■□□□□ 0.75
CACNA1A-201ENST00000360228 NUTM1Q86Y26 1132 aa19.76■□□□□ 0.75
CACNA1A-201ENST00000360228 NUTM2AQ8IVF1 878 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms