RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 TCEANC2Q96MN5 208 aa28.9■■■□□ 2.22
DDX42-201ENST00000359353 HTATSF1O43719 755 aaKnown RBP28.9■■■□□ 2.22
DDX42-201ENST00000359353 FAM173BQ6P4H8 233 aa28.9■■■□□ 2.22
DDX42-201ENST00000359353 UBR1Q8IWV7 1749 aa28.9■■■□□ 2.22
DDX42-201ENST00000359353 IL17RAQ96F46 866 aa28.9■■■□□ 2.22
DDX42-201ENST00000359353 AP5Z1O43299 807 aa28.89■■■□□ 2.22
DDX42-201ENST00000359353 FERMT3Q86UX7 667 aa28.89■■■□□ 2.22
DDX42-201ENST00000359353 PIK3C2AO00443 1686 aa28.89■■■□□ 2.22
DDX42-201ENST00000359353 UBE2HP62256 183 aa28.89■■■□□ 2.21
DDX42-201ENST00000359353 DNAAF4Q8WXU2 420 aa28.89■■■□□ 2.21
DDX42-201ENST00000359353 HYPKQ9NX55 129 aa28.89■■■□□ 2.21
DDX42-201ENST00000359353 BEND3Q5T5X7 828 aa28.88■■■□□ 2.21
DDX42-201ENST00000359353 CACNA1FO60840 1977 aa28.88■■■□□ 2.21
DDX42-201ENST00000359353 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.88■■■□□ 2.21
DDX42-201ENST00000359353 TMEM87AQ8NBN3 555 aa28.87■■■□□ 2.21
DDX42-201ENST00000359353 SPC24Q8NBT2 197 aa28.87■■■□□ 2.21
DDX42-201ENST00000359353 RBM33Q96EV2 1170 aaKnown RBP28.87■■■□□ 2.21
DDX42-201ENST00000359353 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.87■■■□□ 2.21
DDX42-201ENST00000359353 LRRC37A3O60309 1634 aa28.87■■■□□ 2.21
DDX42-201ENST00000359353 DYNC1I1O14576 645 aa28.86■■■□□ 2.21
DDX42-201ENST00000359353 ST3GAL1Q11201 340 aa28.86■■■□□ 2.21
DDX42-201ENST00000359353 NOLC1Q14978 699 aaKnown RBP eCLIP28.86■■■□□ 2.21
DDX42-201ENST00000359353 PDRG1Q9NUG6 133 aa28.86■■■□□ 2.21
DDX42-201ENST00000359353 MTMR6Q9Y217 621 aa28.85■■■□□ 2.21
DDX42-201ENST00000359353 EIF4A1P60842 406 aaKnown RBP28.85■■■□□ 2.21
DDX42-201ENST00000359353 FAM184AQ8NB25 1140 aa28.84■■■□□ 2.21
DDX42-201ENST00000359353 NWD1Q149M9 1564 aa28.84■■■□□ 2.21
DDX42-201ENST00000359353 ME3Q16798 604 aa28.84■■■□□ 2.21
DDX42-201ENST00000359353 CWF19L2Q2TBE0 894 aaKnown RBP28.84■■■□□ 2.21
DDX42-201ENST00000359353 MPRIPQ6WCQ1 1025 aa28.83■■■□□ 2.21
DDX42-201ENST00000359353 FAM227BQ96M60 508 aa28.83■■■□□ 2.21
DDX42-201ENST00000359353 CAMK4Q16566 473 aa28.83■■■□□ 2.21
DDX42-201ENST00000359353 PROSER3Q2NL68 480 aa28.83■■■□□ 2.21
DDX42-201ENST00000359353 PIBF1Q8WXW3 757 aa28.83■■■□□ 2.21
DDX42-201ENST00000359353 PLEKHG1Q9ULL1 1385 aa28.83■■■□□ 2.21
DDX42-201ENST00000359353 PRAMEF22A3QJZ6 481 aa28.82■■■□□ 2.2
DDX42-201ENST00000359353 KDM4AO75164 1064 aa28.82■■■□□ 2.2
DDX42-201ENST00000359353 KCNJ4P48050 445 aa28.82■■■□□ 2.2
DDX42-201ENST00000359353 PRDM10Q9NQV6 1147 aa28.82■■■□□ 2.2
DDX42-201ENST00000359353 GLRX3O76003 335 aaKnown RBP28.81■■■□□ 2.2
DDX42-201ENST00000359353 UVSSAQ2YD98 709 aa28.81■■■□□ 2.2
DDX42-201ENST00000359353 NBPF6Q5VWK0 638 aa28.81■■■□□ 2.2
DDX42-201ENST00000359353 CLASRPQ8N2M8 674 aaKnown RBP28.81■■■□□ 2.2
DDX42-201ENST00000359353 NBPF4Q96M43 638 aa28.81■■■□□ 2.2
DDX42-201ENST00000359353 PXDNLA1KZ92 1463 aa28.81■■■□□ 2.2
DDX42-201ENST00000359353 LRRC59Q96AG4 307 aaKnown RBP28.8■■■□□ 2.2
DDX42-201ENST00000359353 C9orf78Q9NZ63 289 aaPredicted RBP28.8■■■□□ 2.2
DDX42-201ENST00000359353 EID1Q9Y6B2 187 aa28.8■■■□□ 2.2
DDX42-201ENST00000359353 TAF6LQ9Y6J9 622 aa28.8■■■□□ 2.2
DDX42-201ENST00000359353 ADCY9O60503 1353 aa28.8■■■□□ 2.2
DDX42-201ENST00000359353 AACSQ86V21 672 aa28.79■■■□□ 2.2
DDX42-201ENST00000359353 CCDC8Q9H0W5 538 aaPredicted RBP28.79■■■□□ 2.2
DDX42-201ENST00000359353 CYP46A1Q9Y6A2 500 aa28.79■■■□□ 2.2
DDX42-201ENST00000359353 FUCA2Q9BTY2 467 aa28.79■■■□□ 2.2
DDX42-201ENST00000359353 TPCN1Q9ULQ1 816 aa28.79■■■□□ 2.2
DDX42-201ENST00000359353 IFIT2P09913 472 aaKnown RBP28.79■■■□□ 2.2
DDX42-201ENST00000359353 MAP3K2Q9Y2U5 619 aa28.79■■■□□ 2.2
DDX42-201ENST00000359353 DIP2AQ14689 1571 aa28.78■■■□□ 2.2
DDX42-201ENST00000359353 CDC37L1Q7L3B6 337 aa28.78■■■□□ 2.2
DDX42-201ENST00000359353 MYRIPQ8NFW9 859 aa28.78■■■□□ 2.2
DDX42-201ENST00000359353 SIL1Q9H173 461 aa28.78■■■□□ 2.2
DDX42-201ENST00000359353 ECHDC1Q9NTX5 307 aa28.78■■■□□ 2.2
DDX42-201ENST00000359353 PYCARDQ9ULZ3 195 aa28.78■■■□□ 2.2
DDX42-201ENST00000359353 RBM8AQ9Y5S9 174 aaKnown RBP28.78■■■□□ 2.2
DDX42-201ENST00000359353 TLR7Q9NYK1 1049 aaKnown RBP28.77■■■□□ 2.2
DDX42-201ENST00000359353 BTBD11A6QL63 1104 aa28.76■■■□□ 2.19
DDX42-201ENST00000359353 STK3Q13188 491 aa28.76■■■□□ 2.19
DDX42-201ENST00000359353 KCNF1Q9H3M0 494 aa28.76■■■□□ 2.19
DDX42-201ENST00000359353 ATP6V1DQ9Y5K8 247 aa28.76■■■□□ 2.19
DDX42-201ENST00000359353 EPB41L2O43491 1005 aaKnown RBP28.76■■■□□ 2.19
DDX42-201ENST00000359353 TEFQ10587 303 aa28.76■■■□□ 2.19
DDX42-201ENST00000359353 TTC6Q86TZ1 520 aa28.76■■■□□ 2.19
DDX42-201ENST00000359353 CKAP2LQ8IYA6 745 aa28.75■■■□□ 2.19
DDX42-201ENST00000359353 KLHDC4Q8TBB5 520 aa28.75■■■□□ 2.19
DDX42-201ENST00000359353 MAP7D2Q96T17 732 aa28.75■■■□□ 2.19
DDX42-201ENST00000359353 N4BP2Q86UW6 1770 aaPredicted RBP28.75■■■□□ 2.19
DDX42-201ENST00000359353 LIG1P18858 919 aa28.75■■■□□ 2.19
DDX42-201ENST00000359353 AIMP1Q12904 312 aaKnown RBP28.75■■■□□ 2.19
DDX42-201ENST00000359353 VPS53Q5VIR6 699 aa28.75■■■□□ 2.19
DDX42-201ENST00000359353 LARP1BQ659C4 914 aaKnown RBP28.75■■■□□ 2.19
DDX42-201ENST00000359353 NMIQ13287 307 aaPredicted RBP28.74■■■□□ 2.19
DDX42-201ENST00000359353 ZSWIM6Q9HCJ5 1215 aa28.74■■■□□ 2.19
DDX42-201ENST00000359353 TFIP11Q9UBB9 837 aaKnown RBP28.74■■■□□ 2.19
DDX42-201ENST00000359353 KCNA6P17658 529 aa28.74■■■□□ 2.19
DDX42-201ENST00000359353 ZNF710Q8N1W2 664 aa28.74■■■□□ 2.19
DDX42-201ENST00000359353 RUFY2Q8WXA3 655 aa28.74■■■□□ 2.19
DDX42-201ENST00000359353 CREB3L3Q68CJ9 461 aa28.73■■■□□ 2.19
DDX42-201ENST00000359353 TTC41PQ6P2S7 1318 aa28.73■■■□□ 2.19
DDX42-201ENST00000359353 CCDC171Q6TFL3 1326 aa28.73■■■□□ 2.19
DDX42-201ENST00000359353 LETM1O95202 739 aaPredicted RBP28.73■■■□□ 2.19
DDX42-201ENST00000359353 ZNF530Q6P9A1 599 aaPredicted RBP28.73■■■□□ 2.19
DDX42-201ENST00000359353 BOLA2Q9H3K6 86 aa28.73■■■□□ 2.19
DDX42-201ENST00000359353 NECTIN1Q15223 517 aa28.73■■■□□ 2.19
DDX42-201ENST00000359353 HSP90AB4PQ58FF6 505 aa28.73■■■□□ 2.19
DDX42-201ENST00000359353 EDC3Q96F86 508 aaKnown RBP28.72■■■□□ 2.19
DDX42-201ENST00000359353 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.72■■■□□ 2.19
DDX42-201ENST00000359353 LUZP1Q86V48 1076 aa28.71■■■□□ 2.19
DDX42-201ENST00000359353 EAF2Q96CJ1 260 aaPredicted RBP28.71■■■□□ 2.19
DDX42-201ENST00000359353 A0A0D9SFI3 127 aa28.71■■■□□ 2.19
DDX42-201ENST00000359353 CEMIPQ8WUJ3 1361 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms