RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ATP5DP30049 168 aa7.07□□□□□ -1.28
VCAN-203ENST00000343200 CEP85LQ5SZL2 805 aa7.07□□□□□ -1.28
VCAN-203ENST00000343200 BRD4O60885 1362 aaPredicted RBP7.07□□□□□ -1.28
VCAN-203ENST00000343200 IRX4P78413 519 aa7.07□□□□□ -1.28
VCAN-203ENST00000343200 ARHGAP24Q8N264 748 aa7.07□□□□□ -1.28
VCAN-203ENST00000343200 KIF21BO75037 1637 aa7.07□□□□□ -1.28
VCAN-203ENST00000343200 DLG5Q8TDM6 1919 aa7.07□□□□□ -1.28
VCAN-203ENST00000343200 ZEB2O60315 1214 aa7.07□□□□□ -1.28
VCAN-203ENST00000343200 G3BP1Q13283 466 aaKnown RBP eCLIP7.07□□□□□ -1.28
VCAN-203ENST00000343200 LARP1BQ659C4 914 aaKnown RBP7.07□□□□□ -1.28
VCAN-203ENST00000343200 LNPKQ9C0E8 428 aa7.07□□□□□ -1.28
VCAN-203ENST00000343200 XAB2Q9HCS7 855 aaKnown RBP7.07□□□□□ -1.28
VCAN-203ENST00000343200 ATP2C2O75185 946 aa7.07□□□□□ -1.28
VCAN-203ENST00000343200 RASSF2P50749 326 aa7.07□□□□□ -1.28
VCAN-203ENST00000343200 SENP3Q9H4L4 574 aaPredicted RBP7.07□□□□□ -1.28
VCAN-203ENST00000343200 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.07□□□□□ -1.28
VCAN-203ENST00000343200 CCDC62Q6P9F0 684 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 NUCKS1Q9H1E3 243 aaKnown RBP7.06□□□□□ -1.28
VCAN-203ENST00000343200 APBB1IPQ7Z5R6 666 aaPredicted RBP7.06□□□□□ -1.28
VCAN-203ENST00000343200 CCDC12Q8WUD4 166 aaPredicted RBP7.06□□□□□ -1.28
VCAN-203ENST00000343200 FERMT1Q9BQL6 677 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 SMG6Q86US8 1419 aaKnown RBP7.06□□□□□ -1.28
VCAN-203ENST00000343200 CCDC196A0A1B0GTZ2 297 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 BICDL2A1A5D9 508 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 CETN3O15182 167 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 ZKSCAN8Q15776 578 aaPredicted RBP7.06□□□□□ -1.28
VCAN-203ENST00000343200 MICAL1Q8TDZ2 1067 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 PPP6R1Q9UPN7 881 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 MAP1BP46821 2468 aaKnown RBP7.06□□□□□ -1.28
VCAN-203ENST00000343200 DOCK8Q8NF50 2099 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 PEX19P40855 299 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 TRPC3Q13507 836 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 GSDMBQ8TAX9 411 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 SLMAPQ14BN4 828 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 LRRC43Q8N309 656 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 PALMDQ9NP74 551 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 ERCC3P19447 782 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 TERF1P54274 439 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 ERCC6LQ2NKX8 1250 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 LARP1Q6PKG0 1096 aaKnown RBP7.06□□□□□ -1.28
VCAN-203ENST00000343200 SMC1BQ8NDV3 1235 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 API5Q9BZZ5 524 aaKnown RBP7.06□□□□□ -1.28
VCAN-203ENST00000343200 PCM1Q15154 2024 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 CHD2O14647 1828 aaKnown RBP7.06□□□□□ -1.28
VCAN-203ENST00000343200 DMTNQ08495 405 aa7.06□□□□□ -1.28
VCAN-203ENST00000343200 LARSQ9P2J5 1176 aaKnown RBP7.06□□□□□ -1.28
VCAN-203ENST00000343200 RAD21O60216 631 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 NEDD9Q14511 834 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 MUM1Q2TAK8 710 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 UVSSAQ2YD98 709 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.05□□□□□ -1.28
VCAN-203ENST00000343200 MRFAP1Q9Y605 127 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 CKAP5Q14008 2032 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 HDGFP51858 240 aaKnown RBP7.05□□□□□ -1.28
VCAN-203ENST00000343200 CAMK4Q16566 473 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 UIMC1Q96RL1 719 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 INTS8Q75QN2 995 aaKnown RBP7.05□□□□□ -1.28
VCAN-203ENST00000343200 Q9H521 79 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 SLU7O95391 586 aaKnown RBP7.05□□□□□ -1.28
VCAN-203ENST00000343200 TSGA10Q9BZW7 698 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 TP53BP1Q12888 1972 aaPredicted RBP7.05□□□□□ -1.28
VCAN-203ENST00000343200 WRNQ14191 1432 aaPredicted RBP eCLIP7.05□□□□□ -1.28
VCAN-203ENST00000343200 KIAA0100Q14667 2235 aaKnown RBP7.05□□□□□ -1.28
VCAN-203ENST00000343200 TMEM132AQ24JP5 1023 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 KLHDC4Q8TBB5 520 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 MORC4Q8TE76 937 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 MAN1A2O60476 641 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 GFAPP14136 432 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 CASTP20810 708 aaKnown RBP7.05□□□□□ -1.28
VCAN-203ENST00000343200 ARFGAP2Q8N6H7 521 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 TACO1Q9BSH4 297 aaKnown RBP7.05□□□□□ -1.28
VCAN-203ENST00000343200 SELENOOQ9BVL4 669 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 PRKRIP1Q9H875 184 aaPredicted RBP7.05□□□□□ -1.28
VCAN-203ENST00000343200 TTC12Q9H892 705 aaPredicted RBP7.05□□□□□ -1.28
VCAN-203ENST00000343200 SMIM24O75264 130 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 CNGA1P29973 690 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 PCYT1AP49585 367 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 WDR78Q5VTH9 848 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 MCUR1Q96AQ8 359 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 DOCK9Q9BZ29 2069 aa7.05□□□□□ -1.28
VCAN-203ENST00000343200 FYB2Q5VWT5 728 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 NUB1Q9Y5A7 615 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 CTNNA2P26232 953 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 NOLC1Q14978 699 aaKnown RBP eCLIP7.04□□□□□ -1.28
VCAN-203ENST00000343200 HSP90AA5PQ58FG0 334 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 CACNA2D4Q7Z3S7 1137 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 GTF3C6Q969F1 213 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 BMP2KQ9NSY1 1161 aaPredicted RBP7.04□□□□□ -1.28
VCAN-203ENST00000343200 TRMT1Q9NXH9 659 aaKnown RBP7.04□□□□□ -1.28
VCAN-203ENST00000343200 WASF1Q92558 559 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 KCNH8Q96L42 1107 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 C11orf95C9JLR9 678 aaPredicted RBP7.04□□□□□ -1.28
VCAN-203ENST00000343200 PRPHP41219 470 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 VAV2P52735 878 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 TAF7Q15545 349 aaPredicted RBP7.04□□□□□ -1.28
VCAN-203ENST00000343200 KIAA0753Q2KHM9 967 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 ANKRD24Q8TF21 1146 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 SEPT8Q92599 483 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 SRCIN1Q9C0H9 1055 aa7.04□□□□□ -1.28
VCAN-203ENST00000343200 TTC19Q6DKK2 380 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms