RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 NCAPD2Q15021 1401 aa22.97■■□□□ 1.27
RFTN1-201ENST00000334133 TRPM3Q9HCF6 1732 aaPredicted RBP22.97■■□□□ 1.27
RFTN1-201ENST00000334133 SGSM2O43147 1006 aa22.97■■□□□ 1.27
RFTN1-201ENST00000334133 ALDH1L1O75891 902 aa22.97■■□□□ 1.27
RFTN1-201ENST00000334133 LINS1Q8NG48 757 aa22.97■■□□□ 1.27
RFTN1-201ENST00000334133 LMBRD1Q9NUN5 540 aa22.97■■□□□ 1.27
RFTN1-201ENST00000334133 AOX1Q06278 1338 aa22.97■■□□□ 1.27
RFTN1-201ENST00000334133 PHRF1Q9P1Y6 1649 aaKnown RBP22.97■■□□□ 1.27
RFTN1-201ENST00000334133 HSP90AB4PQ58FF6 505 aa22.97■■□□□ 1.27
RFTN1-201ENST00000334133 MYD88Q99836 296 aa22.97■■□□□ 1.27
RFTN1-201ENST00000334133 RBM27Q9P2N5 1060 aaKnown RBP22.97■■□□□ 1.27
RFTN1-201ENST00000334133 KDM6AO15550 1401 aaPredicted RBP22.97■■□□□ 1.27
RFTN1-201ENST00000334133 TPRNQ4KMQ1 711 aa22.96■■□□□ 1.27
RFTN1-201ENST00000334133 TLR7Q9NYK1 1049 aaKnown RBP22.96■■□□□ 1.27
RFTN1-201ENST00000334133 CLEC17AQ6ZS10 378 aa22.96■■□□□ 1.27
RFTN1-201ENST00000334133 MEGF6O75095 1541 aa22.96■■□□□ 1.27
RFTN1-201ENST00000334133 DDX58O95786 925 aaKnown RBP22.95■■□□□ 1.27
RFTN1-201ENST00000334133 HSPA4P34932 840 aa22.95■■□□□ 1.27
RFTN1-201ENST00000334133 CYP27B1O15528 508 aa22.95■■□□□ 1.26
RFTN1-201ENST00000334133 DIAPH3Q9NSV4 1193 aa22.95■■□□□ 1.26
RFTN1-201ENST00000334133 SASH1O94885 1247 aa22.95■■□□□ 1.26
RFTN1-201ENST00000334133 KLHL40Q2TBA0 621 aa22.95■■□□□ 1.26
RFTN1-201ENST00000334133 EPHA10Q5JZY3 1008 aa22.95■■□□□ 1.26
RFTN1-201ENST00000334133 SNX14Q9Y5W7 946 aa22.94■■□□□ 1.26
RFTN1-201ENST00000334133 GLRX3O76003 335 aaKnown RBP22.94■■□□□ 1.26
RFTN1-201ENST00000334133 ANAPC15P60006 121 aa22.94■■□□□ 1.26
RFTN1-201ENST00000334133 MTX1Q13505 466 aa22.94■■□□□ 1.26
RFTN1-201ENST00000334133 KIAA1211Q6ZU35 1233 aa22.94■■□□□ 1.26
RFTN1-201ENST00000334133 EAF2Q96CJ1 260 aaPredicted RBP22.94■■□□□ 1.26
RFTN1-201ENST00000334133 LSG1Q9H089 658 aaKnown RBP22.94■■□□□ 1.26
RFTN1-201ENST00000334133 ECHDC1Q9NTX5 307 aa22.94■■□□□ 1.26
RFTN1-201ENST00000334133 ATP5J2-PTCD1G3V325 749 aa22.93■■□□□ 1.26
RFTN1-201ENST00000334133 PTCD1O75127 700 aaKnown RBP22.93■■□□□ 1.26
RFTN1-201ENST00000334133 FAM43AQ8N2R8 423 aa22.93■■□□□ 1.26
RFTN1-201ENST00000334133 NSFL1CQ9UNZ2 370 aaKnown RBP22.93■■□□□ 1.26
RFTN1-201ENST00000334133 PTH1RQ03431 593 aa22.93■■□□□ 1.26
RFTN1-201ENST00000334133 G3BP1Q13283 466 aaKnown RBP eCLIP22.92■■□□□ 1.26
RFTN1-201ENST00000334133 IFNL2Q8IZJ0 200 aa22.92■■□□□ 1.26
RFTN1-201ENST00000334133 RAD50Q92878 1312 aa22.92■■□□□ 1.26
RFTN1-201ENST00000334133 TTC5Q8N0Z6 440 aa22.92■■□□□ 1.26
RFTN1-201ENST00000334133 MST1RQ04912 1400 aa22.92■■□□□ 1.26
RFTN1-201ENST00000334133 GPT2Q8TD30 523 aa22.92■■□□□ 1.26
RFTN1-201ENST00000334133 PTMSP20962 102 aa22.91■■□□□ 1.26
RFTN1-201ENST00000334133 BOLA2Q9H3K6 86 aa22.91■■□□□ 1.26
RFTN1-201ENST00000334133 GDPD2Q9HCC8 539 aa22.91■■□□□ 1.26
RFTN1-201ENST00000334133 CCDC9Q9Y3X0 531 aaKnown RBP22.91■■□□□ 1.26
RFTN1-201ENST00000334133 NEURL1BA8MQ27 555 aa22.9■■□□□ 1.26
RFTN1-201ENST00000334133 NEXNQ0ZGT2 675 aa22.9■■□□□ 1.26
RFTN1-201ENST00000334133 MCM2P49736 904 aa22.9■■□□□ 1.26
RFTN1-201ENST00000334133 CUL4AQ13619 759 aa22.9■■□□□ 1.26
RFTN1-201ENST00000334133 FAM227BQ96M60 508 aa22.9■■□□□ 1.26
RFTN1-201ENST00000334133 LARP1Q6PKG0 1096 aaKnown RBP22.89■■□□□ 1.26
RFTN1-201ENST00000334133 NDUFB9Q9Y6M9 179 aa22.89■■□□□ 1.26
RFTN1-201ENST00000334133 PRPF40BQ6NWY9 871 aaKnown RBP22.89■■□□□ 1.25
RFTN1-201ENST00000334133 EDC3Q96F86 508 aaKnown RBP22.89■■□□□ 1.25
RFTN1-201ENST00000334133 ANO8Q9HCE9 1232 aaPredicted RBP22.89■■□□□ 1.25
RFTN1-201ENST00000334133 TTC41PQ6P2S7 1318 aa22.89■■□□□ 1.25
RFTN1-201ENST00000334133 GCKRQ14397 625 aa22.89■■□□□ 1.25
RFTN1-201ENST00000334133 CASTP20810 708 aaKnown RBP22.88■■□□□ 1.25
RFTN1-201ENST00000334133 AK2P54819 239 aa22.88■■□□□ 1.25
RFTN1-201ENST00000334133 ADCK5Q3MIX3 580 aa22.88■■□□□ 1.25
RFTN1-201ENST00000334133 ANKRD13DQ6ZTN6 518 aa22.88■■□□□ 1.25
RFTN1-201ENST00000334133 CABP4P57796 275 aa22.88■■□□□ 1.25
RFTN1-201ENST00000334133 ZSCAN23Q3MJ62 389 aa22.88■■□□□ 1.25
RFTN1-201ENST00000334133 UBE3BQ7Z3V4 1068 aa22.88■■□□□ 1.25
RFTN1-201ENST00000334133 OVOS2A0A0G2JMS6 1433 aa22.87■■□□□ 1.25
RFTN1-201ENST00000334133 COL9A3Q14050 684 aaPredicted RBP22.87■■□□□ 1.25
RFTN1-201ENST00000334133 GPATCH3Q96I76 525 aa22.87■■□□□ 1.25
RFTN1-201ENST00000334133 ERC1Q8IUD2 1116 aa22.86■■□□□ 1.25
RFTN1-201ENST00000334133 BRD1O95696 1058 aa22.86■■□□□ 1.25
RFTN1-201ENST00000334133 SNRPA1P09661 255 aaKnown RBP22.86■■□□□ 1.25
RFTN1-201ENST00000334133 C5P01031 1676 aa22.86■■□□□ 1.25
RFTN1-201ENST00000334133 SIPA1L3O60292 1781 aaPredicted RBP22.85■■□□□ 1.25
RFTN1-201ENST00000334133 ALS2Q96Q42 1657 aa22.85■■□□□ 1.25
RFTN1-201ENST00000334133 METTL22Q9BUU2 404 aaPredicted RBP22.85■■□□□ 1.25
RFTN1-201ENST00000334133 LARGE1O95461 756 aa22.85■■□□□ 1.25
RFTN1-201ENST00000334133 RUFY3Q7L099 469 aa22.85■■□□□ 1.25
RFTN1-201ENST00000334133 DCAF5Q96JK2 942 aa22.85■■□□□ 1.25
RFTN1-201ENST00000334133 USP42Q9H9J4 1324 aaKnown RBP22.85■■□□□ 1.25
RFTN1-201ENST00000334133 KCNJ4P48050 445 aa22.84■■□□□ 1.25
RFTN1-201ENST00000334133 JAKMIP1Q96N16 626 aaKnown RBP22.84■■□□□ 1.25
RFTN1-201ENST00000334133 CHGBP05060 677 aa22.84■■□□□ 1.25
RFTN1-201ENST00000334133 NMIQ13287 307 aaPredicted RBP22.84■■□□□ 1.25
RFTN1-201ENST00000334133 CADPS2Q86UW7 1296 aa22.84■■□□□ 1.25
RFTN1-201ENST00000334133 TMEM63CQ9P1W3 806 aa22.83■■□□□ 1.25
RFTN1-201ENST00000334133 KIF1AQ12756 1690 aa22.83■■□□□ 1.25
RFTN1-201ENST00000334133 CAMTA1Q9Y6Y1 1673 aa22.83■■□□□ 1.25
RFTN1-201ENST00000334133 NASPP49321 788 aaPredicted RBP22.83■■□□□ 1.25
RFTN1-201ENST00000334133 FMNL2Q96PY5 1086 aa22.83■■□□□ 1.25
RFTN1-201ENST00000334133 STRCP1A6NGW2 1772 aa22.83■■□□□ 1.25
RFTN1-201ENST00000334133 UTYO14607 1347 aa22.83■■□□□ 1.24
RFTN1-201ENST00000334133 TCEANC2Q96MN5 208 aa22.83■■□□□ 1.24
RFTN1-201ENST00000334133 FSD1Q9BTV5 496 aa22.83■■□□□ 1.24
RFTN1-201ENST00000334133 HDAC5Q9UQL6 1122 aa22.83■■□□□ 1.24
RFTN1-201ENST00000334133 CHMP3Q9Y3E7 222 aa22.83■■□□□ 1.24
RFTN1-201ENST00000334133 LRP10Q7Z4F1 713 aa22.82■■□□□ 1.24
RFTN1-201ENST00000334133 EVI5LQ96CN4 794 aa22.82■■□□□ 1.24
RFTN1-201ENST00000334133 TTC14Q96N46 770 aa22.82■■□□□ 1.24
RFTN1-201ENST00000334133 PRIM1P49642 420 aaKnown RBP22.82■■□□□ 1.24
RFTN1-201ENST00000334133 TOM1L2Q6ZVM7 507 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms