RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 PIP4K2AP48426 406 aaPredicted RBP25.1■■□□□ 1.61
TTC39C-202ENST00000317571 OS9Q13438 667 aaPredicted RBP25.1■■□□□ 1.61
TTC39C-202ENST00000317571 GAS2L3Q86XJ1 694 aa25.1■■□□□ 1.61
TTC39C-202ENST00000317571 FAM43AQ8N2R8 423 aa25.1■■□□□ 1.61
TTC39C-202ENST00000317571 CWC22Q9HCG8 908 aaKnown RBP25.1■■□□□ 1.61
TTC39C-202ENST00000317571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.1■■□□□ 1.61
TTC39C-202ENST00000317571 IFNL2Q8IZJ0 200 aa25.09■■□□□ 1.61
TTC39C-202ENST00000317571 UPF3BQ9BZI7 483 aaKnown RBP25.09■■□□□ 1.61
TTC39C-202ENST00000317571 MCCP23508 829 aa25.08■■□□□ 1.61
TTC39C-202ENST00000317571 HSPA4P34932 840 aa25.08■■□□□ 1.61
TTC39C-202ENST00000317571 CHAMP1Q96JM3 812 aa25.08■■□□□ 1.61
TTC39C-202ENST00000317571 CADPS2Q86UW7 1296 aa25.08■■□□□ 1.61
TTC39C-202ENST00000317571 XAGE3Q8WTP9 111 aa25.08■■□□□ 1.61
TTC39C-202ENST00000317571 USP16Q9Y5T5 823 aa25.08■■□□□ 1.61
TTC39C-202ENST00000317571 NOL8Q76FK4 1167 aaKnown RBP25.07■■□□□ 1.6
TTC39C-202ENST00000317571 TTC41PQ6P2S7 1318 aa25.07■■□□□ 1.6
TTC39C-202ENST00000317571 SASH1O94885 1247 aa25.07■■□□□ 1.6
TTC39C-202ENST00000317571 LSG1Q9H089 658 aaKnown RBP25.07■■□□□ 1.6
TTC39C-202ENST00000317571 RAD50Q92878 1312 aa25.06■■□□□ 1.6
TTC39C-202ENST00000317571 DDX58O95786 925 aaKnown RBP25.06■■□□□ 1.6
TTC39C-202ENST00000317571 COPS6Q7L5N1 327 aa25.06■■□□□ 1.6
TTC39C-202ENST00000317571 CNTROBQ8N137 903 aa25.06■■□□□ 1.6
TTC39C-202ENST00000317571 CUL4AQ13619 759 aa25.06■■□□□ 1.6
TTC39C-202ENST00000317571 NEURL1BA8MQ27 555 aa25.05■■□□□ 1.6
TTC39C-202ENST00000317571 SKOR2Q2VWA4 1001 aaPredicted RBP25.05■■□□□ 1.6
TTC39C-202ENST00000317571 MCTP1Q6DN14 999 aa25.05■■□□□ 1.6
TTC39C-202ENST00000317571 RIC3Q7Z5B4 369 aa25.05■■□□□ 1.6
TTC39C-202ENST00000317571 CLASRPQ8N2M8 674 aaKnown RBP25.05■■□□□ 1.6
TTC39C-202ENST00000317571 EPHA10Q5JZY3 1008 aa25.05■■□□□ 1.6
TTC39C-202ENST00000317571 GLRX3O76003 335 aaKnown RBP25.04■■□□□ 1.6
TTC39C-202ENST00000317571 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.04■■□□□ 1.6
TTC39C-202ENST00000317571 CPDO75976 1380 aa25.04■■□□□ 1.6
TTC39C-202ENST00000317571 CWC27Q6UX04 472 aaKnown RBP25.04■■□□□ 1.6
TTC39C-202ENST00000317571 KLHDC4Q8TBB5 520 aa25.04■■□□□ 1.6
TTC39C-202ENST00000317571 DCAF5Q96JK2 942 aa25.04■■□□□ 1.6
TTC39C-202ENST00000317571 ECHDC1Q9NTX5 307 aa25.03■■□□□ 1.6
TTC39C-202ENST00000317571 LMBRD1Q9NUN5 540 aa25.03■■□□□ 1.6
TTC39C-202ENST00000317571 EPB41L2O43491 1005 aaKnown RBP25.03■■□□□ 1.6
TTC39C-202ENST00000317571 PTMSP20962 102 aa25.03■■□□□ 1.6
TTC39C-202ENST00000317571 RASEFQ8IZ41 740 aa25.03■■□□□ 1.6
TTC39C-202ENST00000317571 MYD88Q99836 296 aa25.03■■□□□ 1.6
TTC39C-202ENST00000317571 GRPEL1Q9HAV7 217 aa25.03■■□□□ 1.6
TTC39C-202ENST00000317571 LARP1Q6PKG0 1096 aaKnown RBP25.02■■□□□ 1.6
TTC39C-202ENST00000317571 EAF2Q96CJ1 260 aaPredicted RBP25.02■■□□□ 1.6
TTC39C-202ENST00000317571 MCM2P49736 904 aa25.02■■□□□ 1.6
TTC39C-202ENST00000317571 GCKRQ14397 625 aa25.02■■□□□ 1.6
TTC39C-202ENST00000317571 AACSQ86V21 672 aa25.02■■□□□ 1.6
TTC39C-202ENST00000317571 METTL22Q9BUU2 404 aaPredicted RBP25.02■■□□□ 1.6
TTC39C-202ENST00000317571 TLR7Q9NYK1 1049 aaKnown RBP25.02■■□□□ 1.6
TTC39C-202ENST00000317571 SNX14Q9Y5W7 946 aa25.02■■□□□ 1.6
TTC39C-202ENST00000317571 KLHL40Q2TBA0 621 aa25.01■■□□□ 1.59
TTC39C-202ENST00000317571 BRINP3Q76B58 766 aa25.01■■□□□ 1.59
TTC39C-202ENST00000317571 JARID2Q92833 1246 aaPredicted RBP25.01■■□□□ 1.59
TTC39C-202ENST00000317571 MRE11P49959 708 aa25.01■■□□□ 1.59
TTC39C-202ENST00000317571 GOLGA6L22H0YM25 854 aa25■■□□□ 1.59
TTC39C-202ENST00000317571 SNRPA1P09661 255 aaKnown RBP25■■□□□ 1.59
TTC39C-202ENST00000317571 ERC1Q8IUD2 1116 aa25■■□□□ 1.59
TTC39C-202ENST00000317571 PARP4Q9UKK3 1724 aaKnown RBP25■■□□□ 1.59
TTC39C-202ENST00000317571 SIL1Q9H173 461 aa25■■□□□ 1.59
TTC39C-202ENST00000317571 DDX49Q9Y6V7 483 aaKnown RBP25■■□□□ 1.59
TTC39C-202ENST00000317571 ARFGEF2Q9Y6D5 1785 aa24.99■■□□□ 1.59
TTC39C-202ENST00000317571 IFIT2P09913 472 aaKnown RBP24.99■■□□□ 1.59
TTC39C-202ENST00000317571 FOXD4L5Q5VV16 416 aaPredicted RBP24.99■■□□□ 1.59
TTC39C-202ENST00000317571 FOXD4L4Q8WXT5 416 aaPredicted RBP24.99■■□□□ 1.59
TTC39C-202ENST00000317571 PLEKHG2Q9H7P9 1386 aa24.99■■□□□ 1.59
TTC39C-202ENST00000317571 AFDNP55196 1824 aaKnown RBP24.99■■□□□ 1.59
TTC39C-202ENST00000317571 CCDC8Q9H0W5 538 aaPredicted RBP24.98■■□□□ 1.59
TTC39C-202ENST00000317571 PTH1RQ03431 593 aa24.98■■□□□ 1.59
TTC39C-202ENST00000317571 ANKRD13DQ6ZTN6 518 aa24.98■■□□□ 1.59
TTC39C-202ENST00000317571 TTC5Q8N0Z6 440 aa24.98■■□□□ 1.59
TTC39C-202ENST00000317571 HDAC5Q9UQL6 1122 aa24.98■■□□□ 1.59
TTC39C-202ENST00000317571 LAMB4A4D0S4 1761 aa24.97■■□□□ 1.59
TTC39C-202ENST00000317571 TTC14Q96N46 770 aa24.97■■□□□ 1.59
TTC39C-202ENST00000317571 FMNL2Q96PY5 1086 aa24.97■■□□□ 1.59
TTC39C-202ENST00000317571 NEXNQ0ZGT2 675 aa24.96■■□□□ 1.59
TTC39C-202ENST00000317571 BRD1O95696 1058 aa24.96■■□□□ 1.59
TTC39C-202ENST00000317571 INTS4Q96HW7 963 aaKnown RBP24.96■■□□□ 1.59
TTC39C-202ENST00000317571 RRAGDQ9NQL2 400 aaPredicted RBP24.96■■□□□ 1.59
TTC39C-202ENST00000317571 CABP4P57796 275 aa24.95■■□□□ 1.59
TTC39C-202ENST00000317571 G3BP1Q13283 466 aaKnown RBP eCLIP24.95■■□□□ 1.59
TTC39C-202ENST00000317571 DIAPH3Q9NSV4 1193 aa24.95■■□□□ 1.58
TTC39C-202ENST00000317571 ISY1Q9ULR0 285 aaKnown RBP24.95■■□□□ 1.58
TTC39C-202ENST00000317571 CPA1P15085 419 aa24.94■■□□□ 1.58
TTC39C-202ENST00000317571 GPT2Q8TD30 523 aa24.94■■□□□ 1.58
TTC39C-202ENST00000317571 PRPF40AO75400 957 aaKnown RBP24.93■■□□□ 1.58
TTC39C-202ENST00000317571 RFX5P48382 616 aaPredicted RBP24.93■■□□□ 1.58
TTC39C-202ENST00000317571 ATP5J2-PTCD1G3V325 749 aa24.93■■□□□ 1.58
TTC39C-202ENST00000317571 PTCD1O75127 700 aaKnown RBP24.93■■□□□ 1.58
TTC39C-202ENST00000317571 EVI5LQ96CN4 794 aa24.93■■□□□ 1.58
TTC39C-202ENST00000317571 LARP6Q9BRS8 491 aaKnown RBP24.93■■□□□ 1.58
TTC39C-202ENST00000317571 NBPF26B4DH59 902 aa24.92■■□□□ 1.58
TTC39C-202ENST00000317571 NBPF14Q5TI25 921 aa24.92■■□□□ 1.58
TTC39C-202ENST00000317571 NBPF10Q6P3W6 841 aaKnown RBP24.92■■□□□ 1.58
TTC39C-202ENST00000317571 NBPF15Q8N660 670 aa24.92■■□□□ 1.58
TTC39C-202ENST00000317571 GPATCH3Q96I76 525 aa24.92■■□□□ 1.58
TTC39C-202ENST00000317571 FAM227BQ96M60 508 aa24.92■■□□□ 1.58
TTC39C-202ENST00000317571 WDR17Q8IZU2 1322 aa24.92■■□□□ 1.58
TTC39C-202ENST00000317571 AK2P54819 239 aa24.91■■□□□ 1.58
TTC39C-202ENST00000317571 NSFL1CQ9UNZ2 370 aaKnown RBP24.91■■□□□ 1.58
TTC39C-202ENST00000317571 UBR2Q8IWV8 1755 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms