RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 HTATSF1O43719 755 aaKnown RBP22.76■■□□□ 1.23
HERPUD2-201ENST00000311350 KIF3AQ9Y496 699 aa22.76■■□□□ 1.23
HERPUD2-201ENST00000311350 CRYBG1Q9Y4K1 1723 aa22.75■■□□□ 1.23
HERPUD2-201ENST00000311350 EPB41L2O43491 1005 aaKnown RBP22.75■■□□□ 1.23
HERPUD2-201ENST00000311350 GTPBP4Q9BZE4 634 aaKnown RBP22.75■■□□□ 1.23
HERPUD2-201ENST00000311350 ADCY5O95622 1261 aa22.75■■□□□ 1.23
HERPUD2-201ENST00000311350 GNAI2P04899 355 aa22.74■■□□□ 1.23
HERPUD2-201ENST00000311350 ANAPC15P60006 121 aa22.74■■□□□ 1.23
HERPUD2-201ENST00000311350 LRRC37A3O60309 1634 aa22.74■■□□□ 1.23
HERPUD2-201ENST00000311350 PLCH1Q4KWH8 1693 aa22.74■■□□□ 1.23
HERPUD2-201ENST00000311350 PRDM11Q9NQV5 511 aa22.73■■□□□ 1.23
HERPUD2-201ENST00000311350 VPS72Q15906 364 aa22.73■■□□□ 1.23
HERPUD2-201ENST00000311350 HSP90AB2PQ58FF8 381 aa22.73■■□□□ 1.23
HERPUD2-201ENST00000311350 BTG4Q9NY30 223 aa22.73■■□□□ 1.23
HERPUD2-201ENST00000311350 NWD2Q9ULI1 1742 aa22.73■■□□□ 1.23
HERPUD2-201ENST00000311350 TUBGCP6Q96RT7 1819 aa22.73■■□□□ 1.23
HERPUD2-201ENST00000311350 RTF1Q92541 710 aaKnown RBP22.72■■□□□ 1.23
HERPUD2-201ENST00000311350 TSPYL4Q9UJ04 414 aa22.72■■□□□ 1.23
HERPUD2-201ENST00000311350 FLT4P35916 1363 aa22.72■■□□□ 1.23
HERPUD2-201ENST00000311350 U2AF2P26368 475 aaKnown RBP eCLIP22.72■■□□□ 1.23
HERPUD2-201ENST00000311350 AOX1Q06278 1338 aa22.71■■□□□ 1.23
HERPUD2-201ENST00000311350 GNAI3P08754 354 aa22.71■■□□□ 1.23
HERPUD2-201ENST00000311350 MCCP23508 829 aa22.71■■□□□ 1.23
HERPUD2-201ENST00000311350 FKBP5Q13451 457 aaPredicted RBP22.71■■□□□ 1.23
HERPUD2-201ENST00000311350 CUL4AQ13619 759 aa22.71■■□□□ 1.23
HERPUD2-201ENST00000311350 USP48Q86UV5 1035 aa22.71■■□□□ 1.23
HERPUD2-201ENST00000311350 N4BP2Q86UW6 1770 aaPredicted RBP22.71■■□□□ 1.23
HERPUD2-201ENST00000311350 PXDNLA1KZ92 1463 aa22.71■■□□□ 1.23
HERPUD2-201ENST00000311350 MAP3K19Q56UN5 1328 aa22.71■■□□□ 1.23
HERPUD2-201ENST00000311350 SRCIN1Q9C0H9 1055 aa22.71■■□□□ 1.23
HERPUD2-201ENST00000311350 PHRF1Q9P1Y6 1649 aaKnown RBP22.71■■□□□ 1.23
HERPUD2-201ENST00000311350 COL14A1Q05707 1796 aaKnown RBP22.71■■□□□ 1.23
HERPUD2-201ENST00000311350 PDCL2Q8N4E4 241 aa22.7■■□□□ 1.22
HERPUD2-201ENST00000311350 INTS4Q96HW7 963 aaKnown RBP22.7■■□□□ 1.22
HERPUD2-201ENST00000311350 ESYT1Q9BSJ8 1104 aa22.7■■□□□ 1.22
HERPUD2-201ENST00000311350 STAP2Q9UGK3 403 aa22.7■■□□□ 1.22
HERPUD2-201ENST00000311350 HCLS1P14317 486 aaPredicted RBP22.7■■□□□ 1.22
HERPUD2-201ENST00000311350 ZC3H6P61129 1189 aaKnown RBP22.7■■□□□ 1.22
HERPUD2-201ENST00000311350 BABAM1Q9NWV8 329 aa22.7■■□□□ 1.22
HERPUD2-201ENST00000311350 CCDC9Q9Y3X0 531 aaKnown RBP22.7■■□□□ 1.22
HERPUD2-201ENST00000311350 MTHFSDQ2M296 383 aaKnown RBP22.69■■□□□ 1.22
HERPUD2-201ENST00000311350 SPTLC3Q9NUV7 552 aa22.69■■□□□ 1.22
HERPUD2-201ENST00000311350 IGSF1Q8N6C5 1336 aa22.69■■□□□ 1.22
HERPUD2-201ENST00000311350 KIF20AO95235 890 aa22.69■■□□□ 1.22
HERPUD2-201ENST00000311350 PLCB2Q00722 1185 aa22.69■■□□□ 1.22
HERPUD2-201ENST00000311350 SYAP1Q96A49 352 aaPredicted RBP22.69■■□□□ 1.22
HERPUD2-201ENST00000311350 STK31Q9BXU1 1019 aa22.69■■□□□ 1.22
HERPUD2-201ENST00000311350 GLI3P10071 1580 aa22.69■■□□□ 1.22
HERPUD2-201ENST00000311350 G2E3Q7L622 706 aa22.68■■□□□ 1.22
HERPUD2-201ENST00000311350 UPF1Q92900 1129 aaKnown RBP eCLIP22.68■■□□□ 1.22
HERPUD2-201ENST00000311350 LRRCC1Q9C099 1032 aa22.68■■□□□ 1.22
HERPUD2-201ENST00000311350 PALD1Q9ULE6 856 aa22.68■■□□□ 1.22
HERPUD2-201ENST00000311350 RIOK3O14730 519 aaKnown RBP22.68■■□□□ 1.22
HERPUD2-201ENST00000311350 NLRP6P59044 892 aa22.68■■□□□ 1.22
HERPUD2-201ENST00000311350 ATP8B2P98198 1209 aa22.68■■□□□ 1.22
HERPUD2-201ENST00000311350 FAM208AQ9UK61 1670 aaKnown RBP22.67■■□□□ 1.22
HERPUD2-201ENST00000311350 LETM1O95202 739 aaPredicted RBP22.67■■□□□ 1.22
HERPUD2-201ENST00000311350 CHRNA2Q15822 529 aa22.67■■□□□ 1.22
HERPUD2-201ENST00000311350 GCP02774 474 aa22.67■■□□□ 1.22
HERPUD2-201ENST00000311350 BBXQ8WY36 941 aaPredicted RBP22.67■■□□□ 1.22
HERPUD2-201ENST00000311350 PYCARDQ9ULZ3 195 aa22.67■■□□□ 1.22
HERPUD2-201ENST00000311350 CCDC30Q5VVM6 783 aa22.66■■□□□ 1.22
HERPUD2-201ENST00000311350 TSHZ3Q63HK5 1081 aa22.66■■□□□ 1.22
HERPUD2-201ENST00000311350 AP5Z1O43299 807 aa22.66■■□□□ 1.22
HERPUD2-201ENST00000311350 CPDO75976 1380 aa22.65■■□□□ 1.22
HERPUD2-201ENST00000311350 NRAPQ86VF7 1730 aa22.65■■□□□ 1.22
HERPUD2-201ENST00000311350 MX1P20591 662 aa22.65■■□□□ 1.22
HERPUD2-201ENST00000311350 UVSSAQ2YD98 709 aa22.65■■□□□ 1.22
HERPUD2-201ENST00000311350 SLC4A10Q6U841 1118 aa22.65■■□□□ 1.22
HERPUD2-201ENST00000311350 KCNF1Q9H3M0 494 aa22.65■■□□□ 1.22
HERPUD2-201ENST00000311350 F6X3S4 739 aa22.64■■□□□ 1.21
HERPUD2-201ENST00000311350 CHMLP26374 656 aa22.64■■□□□ 1.21
HERPUD2-201ENST00000311350 CACNA1FO60840 1977 aa22.63■■□□□ 1.21
HERPUD2-201ENST00000311350 GTF2E1P29083 439 aaPredicted RBP22.63■■□□□ 1.21
HERPUD2-201ENST00000311350 FLIIQ13045 1269 aa22.63■■□□□ 1.21
HERPUD2-201ENST00000311350 PIK3C2AO00443 1686 aa22.63■■□□□ 1.21
HERPUD2-201ENST00000311350 PHF14O94880 888 aa22.63■■□□□ 1.21
HERPUD2-201ENST00000311350 ONECUT3O60422 494 aaPredicted RBP22.62■■□□□ 1.21
HERPUD2-201ENST00000311350 FAM184AQ8NB25 1140 aa22.62■■□□□ 1.21
HERPUD2-201ENST00000311350 UPF3BQ9BZI7 483 aaKnown RBP22.62■■□□□ 1.21
HERPUD2-201ENST00000311350 SPC24Q8NBT2 197 aa22.61■■□□□ 1.21
HERPUD2-201ENST00000311350 ANKRD7Q92527 254 aa22.61■■□□□ 1.21
HERPUD2-201ENST00000311350 MIS18AQ9NYP9 233 aa22.61■■□□□ 1.21
HERPUD2-201ENST00000311350 CNPY2Q9Y2B0 182 aa22.61■■□□□ 1.21
HERPUD2-201ENST00000311350 EXOC6BQ9Y2D4 811 aa22.61■■□□□ 1.21
HERPUD2-201ENST00000311350 SLIT3O75094 1523 aa22.61■■□□□ 1.21
HERPUD2-201ENST00000311350 KDM4AO75164 1064 aa22.6■■□□□ 1.21
HERPUD2-201ENST00000311350 SEPT12Q8IYM1 358 aa22.6■■□□□ 1.21
HERPUD2-201ENST00000311350 KIAA1524Q8TCG1 905 aa22.6■■□□□ 1.21
HERPUD2-201ENST00000311350 USP54Q70EL1 1684 aa22.6■■□□□ 1.21
HERPUD2-201ENST00000311350 EYA1Q99502 592 aa22.6■■□□□ 1.21
HERPUD2-201ENST00000311350 SPATA31A5Q5VU36 1347 aa22.6■■□□□ 1.21
HERPUD2-201ENST00000311350 SPATA31A7Q8IWB4 1347 aa22.6■■□□□ 1.21
HERPUD2-201ENST00000311350 STRN4Q9NRL3 753 aa22.59■■□□□ 1.21
HERPUD2-201ENST00000311350 CCDC183Q5T5S1 534 aa22.59■■□□□ 1.21
HERPUD2-201ENST00000311350 RAB11FIP3O75154 756 aa22.58■■□□□ 1.21
HERPUD2-201ENST00000311350 ZBTB22O15209 634 aa22.58■■□□□ 1.21
HERPUD2-201ENST00000311350 DTNBO60941 627 aa22.58■■□□□ 1.21
HERPUD2-201ENST00000311350 FAM98CQ17RN3 349 aaKnown RBP22.58■■□□□ 1.21
HERPUD2-201ENST00000311350 TCHHQ07283 1943 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms