RNA–Protein interactions for RNA: ENST00000310931.8

HDLBP-201, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-201ENST00000310931 DCAF5Q96JK2 942 aa11.31□□□□□ -0.6
HDLBP-201ENST00000310931 TRIM34Q9BYJ4 488 aa11.31□□□□□ -0.6
HDLBP-201ENST00000310931 API5Q9BZZ5 524 aaKnown RBP11.31□□□□□ -0.6
HDLBP-201ENST00000310931 COL5A2P05997 1499 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-201ENST00000310931 H3BQV1 296 aa11.31□□□□□ -0.6
HDLBP-201ENST00000310931 IFFO2Q5TF58 517 aa11.31□□□□□ -0.6
HDLBP-201ENST00000310931 ZKSCAN2Q63HK3 967 aa11.31□□□□□ -0.6
HDLBP-201ENST00000310931 CHL1O00533 1208 aa11.3□□□□□ -0.6
HDLBP-201ENST00000310931 CHRNA2Q15822 529 aa11.3□□□□□ -0.6
HDLBP-201ENST00000310931 TTLL5Q6EMB2 1281 aa11.3□□□□□ -0.6
HDLBP-201ENST00000310931 ZCRB1Q8TBF4 217 aaKnown RBP11.3□□□□□ -0.6
HDLBP-201ENST00000310931 EIF3JO75822 258 aaKnown RBP11.3□□□□□ -0.6
HDLBP-201ENST00000310931 BRPF1P55201 1214 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-201ENST00000310931 BCL2L13Q9BXK5 485 aa11.3□□□□□ -0.6
HDLBP-201ENST00000310931 COL18A1P39060 1754 aa11.3□□□□□ -0.6
HDLBP-201ENST00000310931 POLR3GO15318 223 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-201ENST00000310931 SSR1P43307 286 aaKnown RBP11.3□□□□□ -0.6
HDLBP-201ENST00000310931 EXOSC9Q06265 439 aaKnown RBP11.3□□□□□ -0.6
HDLBP-201ENST00000310931 ARHGAP45Q92619 1136 aa11.3□□□□□ -0.6
HDLBP-201ENST00000310931 CT47A1Q5JQC4 288 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-201ENST00000310931 FBXW7Q969H0 707 aa11.29□□□□□ -0.6
HDLBP-201ENST00000310931 STRN4Q9NRL3 753 aa11.29□□□□□ -0.6
HDLBP-201ENST00000310931 TWISTNBQ3B726 338 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-201ENST00000310931 CCDC30Q5VVM6 783 aa11.29□□□□□ -0.6
HDLBP-201ENST00000310931 TMCO3Q6UWJ1 677 aa11.29□□□□□ -0.6
HDLBP-201ENST00000310931 TICAM2Q86XR7 235 aa11.29□□□□□ -0.6
HDLBP-201ENST00000310931 HDAC5Q9UQL6 1122 aa11.29□□□□□ -0.6
HDLBP-201ENST00000310931 RNMTO43148 476 aaKnown RBP11.28□□□□□ -0.6
HDLBP-201ENST00000310931 KIF20AO95235 890 aa11.28□□□□□ -0.6
HDLBP-201ENST00000310931 UBXN4Q92575 508 aa11.28□□□□□ -0.6
HDLBP-201ENST00000310931 BTG4Q9NY30 223 aa11.28□□□□□ -0.6
HDLBP-201ENST00000310931 VPS37CA5D8V6 355 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-201ENST00000310931 REC8O95072 547 aa11.28□□□□□ -0.6
HDLBP-201ENST00000310931 TTC5Q8N0Z6 440 aa11.28□□□□□ -0.6
HDLBP-201ENST00000310931 USHBP1Q8N6Y0 703 aa11.28□□□□□ -0.6
HDLBP-201ENST00000310931 CEP89Q96ST8 783 aa11.28□□□□□ -0.6
HDLBP-201ENST00000310931 CLGNO14967 610 aa11.28□□□□□ -0.6
HDLBP-201ENST00000310931 RARSP54136 660 aaKnown RBP11.28□□□□□ -0.6
HDLBP-201ENST00000310931 FAM184AQ8NB25 1140 aa11.28□□□□□ -0.6
HDLBP-201ENST00000310931 MBIPQ9NS73 344 aa11.28□□□□□ -0.6
HDLBP-201ENST00000310931 ERVV-2B6SEH9 535 aa11.27□□□□□ -0.6
HDLBP-201ENST00000310931 DNAAF4Q8WXU2 420 aa11.27□□□□□ -0.6
HDLBP-201ENST00000310931 AXIN2Q9Y2T1 843 aa11.27□□□□□ -0.6
HDLBP-201ENST00000310931 CLSTN1O94985 981 aa11.27□□□□□ -0.61
HDLBP-201ENST00000310931 CCDC102AQ96A19 550 aa11.26□□□□□ -0.61
HDLBP-201ENST00000310931 CEMIPQ8WUJ3 1361 aa11.26□□□□□ -0.61
HDLBP-201ENST00000310931 NWD2Q9ULI1 1742 aa11.26□□□□□ -0.61
HDLBP-201ENST00000310931 PTPRCP08575 1304 aa11.26□□□□□ -0.61
HDLBP-201ENST00000310931 GOLGA6L7A0A1B0GV03 622 aa11.26□□□□□ -0.61
HDLBP-201ENST00000310931 FAM83GA6ND36 823 aa11.26□□□□□ -0.61
HDLBP-201ENST00000310931 BTBD11A6QL63 1104 aa11.26□□□□□ -0.61
HDLBP-201ENST00000310931 EXOC5O00471 708 aa11.26□□□□□ -0.61
HDLBP-201ENST00000310931 ERLIN1O75477 346 aa11.26□□□□□ -0.61
HDLBP-201ENST00000310931 CABP4P57796 275 aa11.26□□□□□ -0.61
HDLBP-201ENST00000310931 MCM10Q7L590 875 aa11.26□□□□□ -0.61
HDLBP-201ENST00000310931 PHKG2P15735 406 aa11.26□□□□□ -0.61
HDLBP-201ENST00000310931 NUTM2BA6NNL0 878 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-201ENST00000310931 NUTM2EB1AL46 878 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-201ENST00000310931 NUTM2AQ8IVF1 878 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-201ENST00000310931 INCENPQ9NQS7 918 aa11.25□□□□□ -0.61
HDLBP-201ENST00000310931 RASSF8Q8NHQ8 419 aa11.25□□□□□ -0.61
HDLBP-201ENST00000310931 NGLY1Q96IV0 654 aa11.25□□□□□ -0.61
HDLBP-201ENST00000310931 NOL10Q9BSC4 688 aaKnown RBP11.25□□□□□ -0.61
HDLBP-201ENST00000310931 CCDC9Q9Y3X0 531 aaKnown RBP11.25□□□□□ -0.61
HDLBP-201ENST00000310931 LRRC37A3O60309 1634 aa11.25□□□□□ -0.61
HDLBP-201ENST00000310931 BARGINQ6ZT62 677 aa11.25□□□□□ -0.61
HDLBP-201ENST00000310931 CCDC94Q9BW85 323 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-201ENST00000310931 DDX19BQ9UMR2 479 aa11.25□□□□□ -0.61
HDLBP-201ENST00000310931 CTR9Q6PD62 1173 aa11.25□□□□□ -0.61
HDLBP-201ENST00000310931 UNC5CLQ8IV45 518 aa11.25□□□□□ -0.61
HDLBP-201ENST00000310931 TSR2Q969E8 191 aaKnown RBP11.25□□□□□ -0.61
HDLBP-201ENST00000310931 RILPL2Q969X0 211 aa11.25□□□□□ -0.61
HDLBP-201ENST00000310931 ZFP91Q96JP5 570 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-201ENST00000310931 TEX13AQ9BXU3 409 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-201ENST00000310931 XRCC6P12956 609 aaKnown RBP eCLIP11.24□□□□□ -0.613e-6■■■■□ 23.5
HDLBP-201ENST00000310931 DZIP1LQ8IYY4 767 aaKnown RBP11.24□□□□□ -0.61
HDLBP-201ENST00000310931 SMC3Q9UQE7 1217 aa11.24□□□□□ -0.61
HDLBP-201ENST00000310931 PDILTQ8N807 584 aa11.24□□□□□ -0.61
HDLBP-201ENST00000310931 PKD1L3Q7Z443 1732 aa11.24□□□□□ -0.61
HDLBP-201ENST00000310931 ADAMTS2O95450 1211 aa11.23□□□□□ -0.61
HDLBP-201ENST00000310931 CCDC73Q6ZRK6 1079 aa11.23□□□□□ -0.61
HDLBP-201ENST00000310931 NKX1-1Q15270 411 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-201ENST00000310931 CAGE1Q8TC20 777 aa11.23□□□□□ -0.61
HDLBP-201ENST00000310931 PANK2Q9BZ23 570 aa11.23□□□□□ -0.61
HDLBP-201ENST00000310931 SLC52A2Q9HAB3 445 aa11.23□□□□□ -0.61
HDLBP-201ENST00000310931 PLCH1Q4KWH8 1693 aa11.23□□□□□ -0.61
HDLBP-201ENST00000310931 RNF20Q5VTR2 975 aa11.23□□□□□ -0.61
HDLBP-201ENST00000310931 KRT222Q8N1A0 295 aa11.23□□□□□ -0.61
HDLBP-201ENST00000310931 DLG5Q8TDM6 1919 aa11.23□□□□□ -0.61
HDLBP-201ENST00000310931 CCP110O43303 1012 aa11.23□□□□□ -0.61
HDLBP-201ENST00000310931 VPS72Q15906 364 aa11.23□□□□□ -0.61
HDLBP-201ENST00000310931 DDX58O95786 925 aaKnown RBP11.22□□□□□ -0.61
HDLBP-201ENST00000310931 BRD2P25440 801 aaKnown RBP11.22□□□□□ -0.61
HDLBP-201ENST00000310931 FAM193AP78312 1265 aa11.22□□□□□ -0.61
HDLBP-201ENST00000310931 C8orf34Q49A92 452 aa11.22□□□□□ -0.61
HDLBP-201ENST00000310931 ATF7IPQ6VMQ6 1270 aa11.22□□□□□ -0.61
HDLBP-201ENST00000310931 FAM177A1Q8N128 213 aaPredicted RBP11.22□□□□□ -0.61
HDLBP-201ENST00000310931 PRIMPOLQ96LW4 560 aa11.22□□□□□ -0.61
HDLBP-201ENST00000310931 LNPKQ9C0E8 428 aa11.22□□□□□ -0.61
HDLBP-201ENST00000310931 VAMP4O75379 141 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms