RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 CLIP2Q9UDT6 1046 aa14.79□□□□□ -0.04
SPTBN2-201ENST00000309996 SLC4A8Q2Y0W8 1093 aa14.79□□□□□ -0.04
SPTBN2-201ENST00000309996 TOP2AP11388 1531 aaKnown RBP14.79□□□□□ -0.04
SPTBN2-201ENST00000309996 RFC4P35249 363 aa14.78□□□□□ -0.04
SPTBN2-201ENST00000309996 SSRP1Q08945 709 aaKnown RBP14.78□□□□□ -0.04
SPTBN2-201ENST00000309996 CDK19Q9BWU1 502 aa14.78□□□□□ -0.04
SPTBN2-201ENST00000309996 A0A1W2PRG0 241 aa14.78□□□□□ -0.04
SPTBN2-201ENST00000309996 CNNM3Q8NE01 707 aa14.78□□□□□ -0.04
SPTBN2-201ENST00000309996 IL27Q8NEV9 243 aa14.78□□□□□ -0.04
SPTBN2-201ENST00000309996 ZNF692Q9BU19 519 aaPredicted RBP14.78□□□□□ -0.04
SPTBN2-201ENST00000309996 VAT1LQ9HCJ6 419 aa14.78□□□□□ -0.04
SPTBN2-201ENST00000309996 SLC12A7Q9Y666 1083 aa14.78□□□□□ -0.04
SPTBN2-201ENST00000309996 PTCD1O75127 700 aaKnown RBP14.78□□□□□ -0.04
SPTBN2-201ENST00000309996 MPRIPQ6WCQ1 1025 aa14.78□□□□□ -0.04
SPTBN2-201ENST00000309996 MTIF2P46199 727 aaKnown RBP14.78□□□□□ -0.04
SPTBN2-201ENST00000309996 GAS8O95995 478 aa14.77□□□□□ -0.04
SPTBN2-201ENST00000309996 TPD52P55327 224 aaPredicted RBP14.77□□□□□ -0.04
SPTBN2-201ENST00000309996 CALML4Q96GE6 196 aa14.77□□□□□ -0.04
SPTBN2-201ENST00000309996 CALCOCO1Q9P1Z2 691 aa14.77□□□□□ -0.04
SPTBN2-201ENST00000309996 POTEB2H3BUK9 544 aa14.77□□□□□ -0.04
SPTBN2-201ENST00000309996 LPXNO60711 386 aa14.77□□□□□ -0.04
SPTBN2-201ENST00000309996 FAM212AQ96EL1 285 aa14.77□□□□□ -0.04
SPTBN2-201ENST00000309996 CCDC14Q49A88 953 aa14.77□□□□□ -0.04
SPTBN2-201ENST00000309996 MAATS1Q7Z4T9 603 aa14.77□□□□□ -0.04
SPTBN2-201ENST00000309996 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.77□□□□□ -0.04
SPTBN2-201ENST00000309996 V9GYY5 206 aaPredicted RBP14.77□□□□□ -0.04
SPTBN2-201ENST00000309996 RIOK3O14730 519 aaKnown RBP14.77□□□□□ -0.05
SPTBN2-201ENST00000309996 LMOD1P29536 600 aaPredicted RBP14.77□□□□□ -0.05
SPTBN2-201ENST00000309996 GPATCH11Q8N954 259 aa14.77□□□□□ -0.05
SPTBN2-201ENST00000309996 DAAM2Q86T65 1068 aa14.77□□□□□ -0.05
SPTBN2-201ENST00000309996 WDR63Q8IWG1 891 aa14.77□□□□□ -0.05
SPTBN2-201ENST00000309996 SLC5A1P13866 664 aa14.77□□□□□ -0.05
SPTBN2-201ENST00000309996 CTAGE5O15320 804 aa14.76□□□□□ -0.05
SPTBN2-201ENST00000309996 AMPD3Q01432 767 aa14.76□□□□□ -0.05
SPTBN2-201ENST00000309996 SMARCC1Q92922 1105 aaPredicted RBP14.76□□□□□ -0.05
SPTBN2-201ENST00000309996 NUTM1Q86Y26 1132 aa14.76□□□□□ -0.05
SPTBN2-201ENST00000309996 CCDC89Q8N998 374 aa14.76□□□□□ -0.05
SPTBN2-201ENST00000309996 PROCA1Q8NCQ7 364 aaPredicted RBP14.76□□□□□ -0.05
SPTBN2-201ENST00000309996 TBC1D5Q92609 795 aa14.76□□□□□ -0.05
SPTBN2-201ENST00000309996 CPLX3Q8WVH0 158 aa14.76□□□□□ -0.05
SPTBN2-201ENST00000309996 MCM4P33991 863 aa14.76□□□□□ -0.05
SPTBN2-201ENST00000309996 MXRA7P84157 204 aa14.76□□□□□ -0.05
SPTBN2-201ENST00000309996 CATIPQ7Z7H3 387 aa14.76□□□□□ -0.05
SPTBN2-201ENST00000309996 OGFOD1Q8N543 542 aa14.76□□□□□ -0.05
SPTBN2-201ENST00000309996 CCDC63Q8NA47 563 aa14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 SCAND2PQ9GZW5 306 aaPredicted RBP14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 CCDC194A0A1B0GVG4 234 aa14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 RAB11FIP3O75154 756 aa14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 ZSCAN30Q86W11 494 aa14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 DDX12PQ92771 950 aa14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 HMGB1P09429 215 aaKnown RBP14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 HDAC9Q9UKV0 1011 aa14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 MAP3K12Q12852 859 aa14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 CCDC144CPQ8IYA2 1237 aa14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 IQCGQ9H095 443 aaKnown RBP14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 CACYBPQ9HB71 228 aaKnown RBP14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 B4DLN1 442 aa14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 MRPL12P52815 198 aaKnown RBP14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 GUCY1B3Q02153 619 aa14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 SPOUT1Q5T280 376 aaKnown RBP14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 CEP112Q8N8E3 955 aa14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 KIF1BPQ96EK5 621 aa14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 FERMT3Q86UX7 667 aa14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 FAM114A1Q8IWE2 563 aa14.75□□□□□ -0.05
SPTBN2-201ENST00000309996 TTC36A6NLP5 189 aa14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 ZC3H6P61129 1189 aaKnown RBP14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 CUL4BQ13620 913 aa14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 IPO4Q8TEX9 1081 aaKnown RBP14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 PRDM10Q9NQV6 1147 aa14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 NOD1Q9Y239 953 aa14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 ZNF213O14771 459 aa14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 PAIP2Q9BPZ3 127 aaKnown RBP14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 TTC12Q9H892 705 aaPredicted RBP14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 JADE2Q9NQC1 790 aa14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 PFDN4Q9NQP4 134 aa14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 TRMT1Q9NXH9 659 aaKnown RBP14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 CCDC40Q4G0X9 1142 aa14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 GNAT3A8MTJ3 354 aa14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 POLD1P28340 1107 aa14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 IFI16Q16666 785 aaKnown RBP14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 TCP11L1Q9NUJ3 509 aa14.74□□□□□ -0.05
SPTBN2-201ENST00000309996 DDX46Q7L014 1031 aaKnown RBP14.73□□□□□ -0.05
SPTBN2-201ENST00000309996 FBF1Q8TES7 1133 aa14.73□□□□□ -0.05
SPTBN2-201ENST00000309996 GMNNO75496 209 aa14.73□□□□□ -0.05
SPTBN2-201ENST00000309996 ANAPC4Q9UJX5 808 aa14.73□□□□□ -0.05
SPTBN2-201ENST00000309996 BAG3O95817 575 aa14.73□□□□□ -0.05
SPTBN2-201ENST00000309996 AKNAQ7Z591 1439 aa14.73□□□□□ -0.05
SPTBN2-201ENST00000309996 HSF2BPO75031 334 aa14.73□□□□□ -0.05
SPTBN2-201ENST00000309996 CCDC155Q8N6L0 562 aa14.73□□□□□ -0.05
SPTBN2-201ENST00000309996 CCDC12Q8WUD4 166 aaPredicted RBP14.73□□□□□ -0.05
SPTBN2-201ENST00000309996 PLEKHH1Q9ULM0 1364 aa14.73□□□□□ -0.05
SPTBN2-201ENST00000309996 GLRX3O76003 335 aaKnown RBP14.73□□□□□ -0.05
SPTBN2-201ENST00000309996 KIF5AQ12840 1032 aa14.72□□□□□ -0.05
SPTBN2-201ENST00000309996 CCT6BQ92526 530 aa14.72□□□□□ -0.05
SPTBN2-201ENST00000309996 CRCPO75575 148 aa14.72□□□□□ -0.05
SPTBN2-201ENST00000309996 PRPF40BQ6NWY9 871 aaKnown RBP14.72□□□□□ -0.05
SPTBN2-201ENST00000309996 BOLA2Q9H3K6 86 aa14.72□□□□□ -0.05
SPTBN2-201ENST00000309996 RNF41Q9H4P4 317 aaPredicted RBP14.72□□□□□ -0.05
SPTBN2-201ENST00000309996 GSDMDP57764 484 aa14.72□□□□□ -0.05
SPTBN2-201ENST00000309996 MKRN1Q9UHC7 482 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms