RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
APOBEC3F-201ENST00000308521 DDX49Q9Y6V7 483 aaKnown RBP12.56□□□□□ -0.4
APOBEC3F-201ENST00000308521 ABCC6O95255 1503 aa12.56□□□□□ -0.4
APOBEC3F-201ENST00000308521 CYP2E1P05181 493 aaPredicted RBP12.56□□□□□ -0.4
APOBEC3F-201ENST00000308521 SOS1Q07889 1333 aaPredicted RBP12.56□□□□□ -0.4
APOBEC3F-201ENST00000308521 HEG1Q9ULI3 1381 aa12.56□□□□□ -0.4
APOBEC3F-201ENST00000308521 A0A0G2JS52 829 aa12.55□□□□□ -0.4
APOBEC3F-201ENST00000308521 PLEKHM2Q8IWE5 1019 aa12.55□□□□□ -0.4
APOBEC3F-201ENST00000308521 USP44Q9H0E7 712 aa12.55□□□□□ -0.4
APOBEC3F-201ENST00000308521 PDIA6Q15084 440 aa12.55□□□□□ -0.4
APOBEC3F-201ENST00000308521 DCTPP1Q9H773 170 aa12.55□□□□□ -0.4
APOBEC3F-201ENST00000308521 CWC22Q9HCG8 908 aaKnown RBP12.55□□□□□ -0.4
APOBEC3F-201ENST00000308521 MAP3K2Q9Y2U5 619 aa12.55□□□□□ -0.4
APOBEC3F-201ENST00000308521 SCN11AQ9UI33 1791 aa12.55□□□□□ -0.4
APOBEC3F-201ENST00000308521 GSPT1P15170 499 aaKnown RBP12.55□□□□□ -0.4
APOBEC3F-201ENST00000308521 ANKRD44Q8N8A2 993 aa12.55□□□□□ -0.4
APOBEC3F-201ENST00000308521 DNAAF4Q8WXU2 420 aa12.55□□□□□ -0.4
APOBEC3F-201ENST00000308521 SYTL4Q96C24 671 aaPredicted RBP12.55□□□□□ -0.4
APOBEC3F-201ENST00000308521 BCL11BQ9C0K0 894 aaPredicted RBP12.55□□□□□ -0.4
APOBEC3F-201ENST00000308521 AHDC1Q5TGY3 1603 aaPredicted RBP12.54□□□□□ -0.4
APOBEC3F-201ENST00000308521 SMARCA5O60264 1052 aaPredicted RBP12.54□□□□□ -0.4
APOBEC3F-201ENST00000308521 NBPF7P0C2Y1 421 aaPredicted RBP12.54□□□□□ -0.4
APOBEC3F-201ENST00000308521 CWF19L2Q2TBE0 894 aaKnown RBP12.54□□□□□ -0.4
APOBEC3F-201ENST00000308521 TTC22Q5TAA0 569 aa12.54□□□□□ -0.4
APOBEC3F-201ENST00000308521 FMNL2Q96PY5 1086 aa12.54□□□□□ -0.4
APOBEC3F-201ENST00000308521 LRRFIP2Q9Y608 721 aaKnown RBP12.54□□□□□ -0.4
APOBEC3F-201ENST00000308521 PHLPP1O60346 1717 aa12.54□□□□□ -0.4
APOBEC3F-201ENST00000308521 SNRPA1P09661 255 aaKnown RBP12.54□□□□□ -0.4
APOBEC3F-201ENST00000308521 DMTNQ08495 405 aa12.54□□□□□ -0.4
APOBEC3F-201ENST00000308521 C16orf71Q8IYS4 520 aaPredicted RBP12.54□□□□□ -0.4
APOBEC3F-201ENST00000308521 USP26Q9BXU7 913 aa12.54□□□□□ -0.4
APOBEC3F-201ENST00000308521 SRCIN1Q9C0H9 1055 aa12.54□□□□□ -0.4
APOBEC3F-201ENST00000308521 SIPA1L3O60292 1781 aaPredicted RBP12.53□□□□□ -0.4
APOBEC3F-201ENST00000308521 GNAI2P04899 355 aa12.53□□□□□ -0.4
APOBEC3F-201ENST00000308521 LMBRD1Q9NUN5 540 aa12.53□□□□□ -0.4
APOBEC3F-201ENST00000308521 ADCY9O60503 1353 aa12.53□□□□□ -0.4
APOBEC3F-201ENST00000308521 PNMA6EA0A0J9YXQ4 647 aa12.53□□□□□ -0.4
APOBEC3F-201ENST00000308521 KIF20AO95235 890 aa12.53□□□□□ -0.4
APOBEC3F-201ENST00000308521 BEND3Q5T5X7 828 aa12.53□□□□□ -0.4
APOBEC3F-201ENST00000308521 COPS6Q7L5N1 327 aa12.53□□□□□ -0.4
APOBEC3F-201ENST00000308521 XAGE3Q8WTP9 111 aa12.53□□□□□ -0.4
APOBEC3F-201ENST00000308521 C8orf37Q96NL8 207 aa12.53□□□□□ -0.4
APOBEC3F-201ENST00000308521 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
APOBEC3F-201ENST00000308521 ASAP1Q9ULH1 1129 aa12.53□□□□□ -0.4
APOBEC3F-201ENST00000308521 ATP10DQ9P241 1426 aa12.53□□□□□ -0.4
APOBEC3F-201ENST00000308521 ERVV-2B6SEH9 535 aa12.52□□□□□ -0.41
APOBEC3F-201ENST00000308521 EXOC5O00471 708 aa12.52□□□□□ -0.41
APOBEC3F-201ENST00000308521 RPAP2Q8IXW5 612 aaPredicted RBP12.52□□□□□ -0.41
APOBEC3F-201ENST00000308521 IPO4Q8TEX9 1081 aaKnown RBP12.52□□□□□ -0.41
APOBEC3F-201ENST00000308521 BBXQ8WY36 941 aaPredicted RBP12.52□□□□□ -0.41
APOBEC3F-201ENST00000308521 PKD1L3Q7Z443 1732 aa12.52□□□□□ -0.41
APOBEC3F-201ENST00000308521 NKX1-1Q15270 411 aaPredicted RBP12.52□□□□□ -0.41
APOBEC3F-201ENST00000308521 HYPKQ9NX55 129 aa12.52□□□□□ -0.41
APOBEC3F-201ENST00000308521 TMOD3Q9NYL9 352 aa12.52□□□□□ -0.41
APOBEC3F-201ENST00000308521 EXOC6BQ9Y2D4 811 aa12.52□□□□□ -0.41
APOBEC3F-201ENST00000308521 ADAMTS7Q9UKP4 1686 aa12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 A1BGP04217 495 aa12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 UBTFL1P0CB47 393 aaPredicted RBP12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 MSNP26038 577 aaKnown RBP12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 TAF3Q5VWG9 929 aa12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 PIGBQ92521 554 aa12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 JARID2Q92833 1246 aaPredicted RBP12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 PDLIM2Q96JY6 352 aa12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 COL16A1Q07092 1604 aaPredicted RBP12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 ZSCAN23Q3MJ62 389 aa12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 MCTP1Q6DN14 999 aa12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 KSR2Q6VAB6 950 aa12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 RIC3Q7Z5B4 369 aa12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 OTUD7AQ8TE49 926 aaPredicted RBP12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 CACNA1FO60840 1977 aa12.51□□□□□ -0.41
APOBEC3F-201ENST00000308521 GNAI3P08754 354 aa12.5□□□□□ -0.41
APOBEC3F-201ENST00000308521 GTPBP4Q9BZE4 634 aaKnown RBP12.5□□□□□ -0.41
APOBEC3F-201ENST00000308521 ZNF330Q9Y3S2 320 aaPredicted RBP12.5□□□□□ -0.41
APOBEC3F-201ENST00000308521 DYNC1I1O14576 645 aa12.5□□□□□ -0.41
APOBEC3F-201ENST00000308521 NGLY1Q96IV0 654 aa12.5□□□□□ -0.41
APOBEC3F-201ENST00000308521 CHMP4AQ9BY43 222 aa12.5□□□□□ -0.41
APOBEC3F-201ENST00000308521 PARP4Q9UKK3 1724 aaKnown RBP12.5□□□□□ -0.41
APOBEC3F-201ENST00000308521 ST18O60284 1047 aa12.49□□□□□ -0.41
APOBEC3F-201ENST00000308521 ZNF500O60304 480 aaPredicted RBP12.49□□□□□ -0.41
APOBEC3F-201ENST00000308521 GTF2E1P29083 439 aaPredicted RBP12.49□□□□□ -0.41
APOBEC3F-201ENST00000308521 ACSBG1Q96GR2 724 aa12.49□□□□□ -0.41
APOBEC3F-201ENST00000308521 NAP1L2Q9ULW6 460 aaPredicted RBP12.49□□□□□ -0.41
APOBEC3F-201ENST00000308521 NOL7Q9UMY1 257 aaKnown RBP12.49□□□□□ -0.41
APOBEC3F-201ENST00000308521 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
APOBEC3F-201ENST00000308521 NBPF14Q5TI25 921 aa12.49□□□□□ -0.41
APOBEC3F-201ENST00000308521 NBPF10Q6P3W6 841 aaKnown RBP12.49□□□□□ -0.41
APOBEC3F-201ENST00000308521 CASC1Q6TDU7 716 aa12.49□□□□□ -0.41
APOBEC3F-201ENST00000308521 NBPF15Q8N660 670 aa12.49□□□□□ -0.41
APOBEC3F-201ENST00000308521 C9orf78Q9NZ63 289 aaPredicted RBP12.49□□□□□ -0.41
APOBEC3F-201ENST00000308521 C5P01031 1676 aa12.48□□□□□ -0.41
APOBEC3F-201ENST00000308521 CAVIN1Q6NZI2 390 aaKnown RBP12.48□□□□□ -0.41
APOBEC3F-201ENST00000308521 COL14A1Q05707 1796 aaKnown RBP12.48□□□□□ -0.41
APOBEC3F-201ENST00000308521 SPATA31A1Q5TZJ5 1347 aa12.48□□□□□ -0.41
APOBEC3F-201ENST00000308521 PRIM1P49642 420 aaKnown RBP12.48□□□□□ -0.41
APOBEC3F-201ENST00000308521 MYD88Q99836 296 aa12.48□□□□□ -0.41
APOBEC3F-201ENST00000308521 AK9Q5TCS8 1911 aa12.48□□□□□ -0.41
APOBEC3F-201ENST00000308521 MRC1P22897 1456 aa12.48□□□□□ -0.41
APOBEC3F-201ENST00000308521 ATP5J2-PTCD1G3V325 749 aa12.47□□□□□ -0.41
APOBEC3F-201ENST00000308521 MCM5P33992 734 aa12.47□□□□□ -0.41
APOBEC3F-201ENST00000308521 ATP8B2P98198 1209 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms