RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 NRBP1Q9UHY1 535 aa19.42■□□□□ 0.7
CCDC8-201ENST00000307522 TMEM94Q12767 1356 aa19.42■□□□□ 0.7
CCDC8-201ENST00000307522 DRC7Q8IY82 874 aa19.42■□□□□ 0.7
CCDC8-201ENST00000307522 SPTLC3Q9NUV7 552 aa19.42■□□□□ 0.7
CCDC8-201ENST00000307522 TRIM6-TRIM34B2RNG4 842 aa19.42■□□□□ 0.7
CCDC8-201ENST00000307522 BRD1O95696 1058 aa19.42■□□□□ 0.7
CCDC8-201ENST00000307522 TRIM34Q9BYJ4 488 aa19.42■□□□□ 0.7
CCDC8-201ENST00000307522 TCHHQ07283 1943 aa19.41■□□□□ 0.7
CCDC8-201ENST00000307522 OGFRQ9NZT2 677 aa19.41■□□□□ 0.7
CCDC8-201ENST00000307522 CTNNA3Q9UI47 895 aa19.41■□□□□ 0.7
CCDC8-201ENST00000307522 DLG5Q8TDM6 1919 aa19.41■□□□□ 0.7
CCDC8-201ENST00000307522 A0A0G2JS52 829 aa19.4■□□□□ 0.7
CCDC8-201ENST00000307522 KDM4AO75164 1064 aa19.4■□□□□ 0.7
CCDC8-201ENST00000307522 CHMP4CQ96CF2 233 aa19.4■□□□□ 0.7
CCDC8-201ENST00000307522 CAMK4Q16566 473 aa19.4■□□□□ 0.7
CCDC8-201ENST00000307522 FLIIQ13045 1269 aa19.4■□□□□ 0.7
CCDC8-201ENST00000307522 C19orf44Q9H6X5 657 aa19.4■□□□□ 0.7
CCDC8-201ENST00000307522 PIK3R4Q99570 1358 aa19.39■□□□□ 0.7
CCDC8-201ENST00000307522 TAF7Q15545 349 aaPredicted RBP19.39■□□□□ 0.69
CCDC8-201ENST00000307522 CHPF2Q9P2E5 772 aa19.39■□□□□ 0.69
CCDC8-201ENST00000307522 BTBD11A6QL63 1104 aa19.38■□□□□ 0.69
CCDC8-201ENST00000307522 ANO2Q9NQ90 1003 aa19.38■□□□□ 0.69
CCDC8-201ENST00000307522 AKAP12Q02952 1782 aa19.38■□□□□ 0.69
CCDC8-201ENST00000307522 CRB1P82279 1406 aa19.38■□□□□ 0.69
CCDC8-201ENST00000307522 SYTL4Q96C24 671 aaPredicted RBP19.38■□□□□ 0.69
CCDC8-201ENST00000307522 ABCC4O15439 1325 aa19.38■□□□□ 0.69
CCDC8-201ENST00000307522 PROSER3Q2NL68 480 aa19.38■□□□□ 0.69
CCDC8-201ENST00000307522 SRCIN1Q9C0H9 1055 aa19.38■□□□□ 0.69
CCDC8-201ENST00000307522 STRN4Q9NRL3 753 aa19.38■□□□□ 0.69
CCDC8-201ENST00000307522 PIK3C2AO00443 1686 aa19.37■□□□□ 0.69
CCDC8-201ENST00000307522 CAPN2P17655 700 aa19.37■□□□□ 0.69
CCDC8-201ENST00000307522 TMX1Q9H3N1 280 aa19.37■□□□□ 0.69
CCDC8-201ENST00000307522 KNDC1Q76NI1 1749 aa19.37■□□□□ 0.69
CCDC8-201ENST00000307522 C1orf141Q5JVX7 400 aa19.37■□□□□ 0.69
CCDC8-201ENST00000307522 CCDC186Q7Z3E2 898 aa19.37■□□□□ 0.69
CCDC8-201ENST00000307522 IL1RAPL2Q9NP60 686 aa19.37■□□□□ 0.69
CCDC8-201ENST00000307522 PHF14O94880 888 aa19.36■□□□□ 0.69
CCDC8-201ENST00000307522 MYL6BP14649 208 aa19.36■□□□□ 0.69
CCDC8-201ENST00000307522 CASC1Q6TDU7 716 aa19.36■□□□□ 0.69
CCDC8-201ENST00000307522 ZNF335Q9H4Z2 1342 aaPredicted RBP19.36■□□□□ 0.69
CCDC8-201ENST00000307522 MAP4K4O95819 1239 aaPredicted RBP19.36■□□□□ 0.69
CCDC8-201ENST00000307522 TNNT1P13805 278 aa19.36■□□□□ 0.69
CCDC8-201ENST00000307522 ARHGEF10O15013 1369 aa19.36■□□□□ 0.69
CCDC8-201ENST00000307522 LUZP1Q86V48 1076 aa19.36■□□□□ 0.69
CCDC8-201ENST00000307522 ARHGEF25Q86VW2 580 aa19.36■□□□□ 0.69
CCDC8-201ENST00000307522 RILPL2Q969X0 211 aa19.36■□□□□ 0.69
CCDC8-201ENST00000307522 TERF2Q15554 542 aa19.35■□□□□ 0.69
CCDC8-201ENST00000307522 PNMA6EA0A0J9YXQ4 647 aa19.34■□□□□ 0.69
CCDC8-201ENST00000307522 CCDC183Q5T5S1 534 aa19.34■□□□□ 0.69
CCDC8-201ENST00000307522 ZNF330Q9Y3S2 320 aaPredicted RBP19.34■□□□□ 0.69
CCDC8-201ENST00000307522 LRRFIP2Q9Y608 721 aaKnown RBP19.34■□□□□ 0.69
CCDC8-201ENST00000307522 GOLGB1Q14789 3259 aaKnown RBP19.34■□□□□ 0.69
CCDC8-201ENST00000307522 CEP85Q6P2H3 762 aa19.34■□□□□ 0.69
CCDC8-201ENST00000307522 DDX54Q8TDD1 881 aaKnown RBP19.34■□□□□ 0.69
CCDC8-201ENST00000307522 MAP3K5Q99683 1374 aa19.34■□□□□ 0.69
CCDC8-201ENST00000307522 ERC2O15083 957 aa19.34■□□□□ 0.69
CCDC8-201ENST00000307522 CTIFO43310 598 aaKnown RBP19.34■□□□□ 0.69
CCDC8-201ENST00000307522 CKAP2LQ8IYA6 745 aa19.33■□□□□ 0.69
CCDC8-201ENST00000307522 GTF3C6Q969F1 213 aa19.33■□□□□ 0.69
CCDC8-201ENST00000307522 TIGD1Q96MW7 591 aa19.33■□□□□ 0.69
CCDC8-201ENST00000307522 FEZ1Q99689 392 aa19.33■□□□□ 0.69
CCDC8-201ENST00000307522 DDX41Q9UJV9 622 aaKnown RBP19.33■□□□□ 0.69
CCDC8-201ENST00000307522 ADGRL3Q9HAR2 1447 aa19.33■□□□□ 0.69
CCDC8-201ENST00000307522 PI4KAP2A4QPH2 592 aa19.33■□□□□ 0.68
CCDC8-201ENST00000307522 REC8O95072 547 aa19.33■□□□□ 0.68
CCDC8-201ENST00000307522 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.68
CCDC8-201ENST00000307522 PI4KAP1Q8N8J0 262 aa19.33■□□□□ 0.68
CCDC8-201ENST00000307522 NFATC2IPQ8NCF5 419 aa19.32■□□□□ 0.68
CCDC8-201ENST00000307522 KCNH5Q8NCM2 988 aa19.32■□□□□ 0.68
CCDC8-201ENST00000307522 KIF18AQ8NI77 898 aa19.32■□□□□ 0.68
CCDC8-201ENST00000307522 CPA1P15085 419 aa19.32■□□□□ 0.68
CCDC8-201ENST00000307522 CCDC30Q5VVM6 783 aa19.32■□□□□ 0.68
CCDC8-201ENST00000307522 TPD52L1Q16890 204 aaPredicted RBP19.32■□□□□ 0.68
CCDC8-201ENST00000307522 KMT5BQ4FZB7 885 aa19.32■□□□□ 0.68
CCDC8-201ENST00000307522 TAF3Q5VWG9 929 aa19.32■□□□□ 0.68
CCDC8-201ENST00000307522 ARHGAP45Q92619 1136 aa19.32■□□□□ 0.68
CCDC8-201ENST00000307522 MX1P20591 662 aa19.31■□□□□ 0.68
CCDC8-201ENST00000307522 ARID5BQ14865 1188 aa19.31■□□□□ 0.68
CCDC8-201ENST00000307522 CCDC112Q8NEF3 446 aa19.31■□□□□ 0.68
CCDC8-201ENST00000307522 NALCNQ8IZF0 1738 aa19.31■□□□□ 0.68
CCDC8-201ENST00000307522 RAPGEF4Q8WZA2 1011 aa19.31■□□□□ 0.68
CCDC8-201ENST00000307522 TRMT1Q9NXH9 659 aaKnown RBP19.31■□□□□ 0.68
CCDC8-201ENST00000307522 CCDC9Q9Y3X0 531 aaKnown RBP19.31■□□□□ 0.68
CCDC8-201ENST00000307522 FAM173BQ6P4H8 233 aa19.3■□□□□ 0.68
CCDC8-201ENST00000307522 FAM184AQ8NB25 1140 aa19.3■□□□□ 0.68
CCDC8-201ENST00000307522 CWF19L2Q2TBE0 894 aaKnown RBP19.3■□□□□ 0.68
CCDC8-201ENST00000307522 KDRP35968 1356 aa19.3■□□□□ 0.68
CCDC8-201ENST00000307522 NBPF7P0C2Y1 421 aaPredicted RBP19.3■□□□□ 0.68
CCDC8-201ENST00000307522 ELF2Q15723 593 aa19.3■□□□□ 0.68
CCDC8-201ENST00000307522 PLEKHO1Q53GL0 409 aaPredicted RBP19.3■□□□□ 0.68
CCDC8-201ENST00000307522 ZNF215Q9UL58 517 aaPredicted RBP19.3■□□□□ 0.68
CCDC8-201ENST00000307522 KAT6BQ8WYB5 2073 aa19.3■□□□□ 0.68
CCDC8-201ENST00000307522 USP27XA6NNY8 438 aa19.29■□□□□ 0.68
CCDC8-201ENST00000307522 NRKQ7Z2Y5 1582 aa19.29■□□□□ 0.68
CCDC8-201ENST00000307522 DNM1Q05193 864 aaKnown RBP19.29■□□□□ 0.68
CCDC8-201ENST00000307522 DCTPP1Q9H773 170 aa19.29■□□□□ 0.68
CCDC8-201ENST00000307522 UVSSAQ2YD98 709 aa19.28■□□□□ 0.68
CCDC8-201ENST00000307522 TOPAZ1Q8N9V7 1692 aa19.28■□□□□ 0.68
CCDC8-201ENST00000307522 TAF7LQ5H9L4 462 aa19.28■□□□□ 0.68
CCDC8-201ENST00000307522 NUTM1Q86Y26 1132 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms