RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 RBM17Q96I25 401 aaKnown RBP12.6□□□□□ -0.39
SYNPO2-201ENST00000307142 HOXC9P31274 260 aa12.6□□□□□ -0.39
SYNPO2-201ENST00000307142 IQSEC3Q9UPP2 1182 aaPredicted RBP12.6□□□□□ -0.39
SYNPO2-201ENST00000307142 PICALMQ13492 652 aa12.59□□□□□ -0.39
SYNPO2-201ENST00000307142 EHMT1Q9H9B1 1298 aa12.59□□□□□ -0.39
SYNPO2-201ENST00000307142 IP6K1Q92551 441 aa12.59□□□□□ -0.39
SYNPO2-201ENST00000307142 ME1P48163 572 aa12.59□□□□□ -0.39
SYNPO2-201ENST00000307142 STIM1Q13586 685 aa12.59□□□□□ -0.39
SYNPO2-201ENST00000307142 ZGPATQ8N5A5 531 aaKnown RBP12.59□□□□□ -0.39
SYNPO2-201ENST00000307142 ARHGEF10O15013 1369 aa12.59□□□□□ -0.39
SYNPO2-201ENST00000307142 KIF1BO60333 1816 aa12.59□□□□□ -0.39
SYNPO2-201ENST00000307142 DCAF5Q96JK2 942 aa12.59□□□□□ -0.39
SYNPO2-201ENST00000307142 TANGO6Q9C0B7 1094 aa12.59□□□□□ -0.39
SYNPO2-201ENST00000307142 CTCFLQ8NI51 663 aaPredicted RBP12.59□□□□□ -0.39
SYNPO2-201ENST00000307142 SHANK2Q9UPX8 1470 aa12.59□□□□□ -0.39
SYNPO2-201ENST00000307142 VTI1AQ96AJ9 217 aa12.58□□□□□ -0.4
SYNPO2-201ENST00000307142 RARSP54136 660 aaKnown RBP12.58□□□□□ -0.4
SYNPO2-201ENST00000307142 FAM13BQ9NYF5 915 aa12.58□□□□□ -0.4
SYNPO2-201ENST00000307142 LARP1BQ659C4 914 aaKnown RBP12.58□□□□□ -0.4
SYNPO2-201ENST00000307142 RNF41Q9H4P4 317 aaPredicted RBP12.58□□□□□ -0.4
SYNPO2-201ENST00000307142 VAT1LQ9HCJ6 419 aa12.58□□□□□ -0.4
SYNPO2-201ENST00000307142 NSFL1CQ9UNZ2 370 aaKnown RBP12.58□□□□□ -0.4
SYNPO2-201ENST00000307142 PDE4BQ07343 736 aa12.58□□□□□ -0.4
SYNPO2-201ENST00000307142 FIBPO43427 364 aa12.58□□□□□ -0.4
SYNPO2-201ENST00000307142 CCDC82Q8N4S0 544 aa12.58□□□□□ -0.4
SYNPO2-201ENST00000307142 CRNKL1Q9BZJ0 848 aaKnown RBP12.58□□□□□ -0.4
SYNPO2-201ENST00000307142 PRAG1Q86YV5 1406 aa12.58□□□□□ -0.4
SYNPO2-201ENST00000307142 FILIP1LQ4L180 1135 aa12.57□□□□□ -0.4
SYNPO2-201ENST00000307142 MPHOSPH6Q99547 160 aaKnown RBP12.57□□□□□ -0.4
SYNPO2-201ENST00000307142 TSPY2A6NKD2 308 aa12.57□□□□□ -0.4
SYNPO2-201ENST00000307142 CATIPQ7Z7H3 387 aa12.57□□□□□ -0.4
SYNPO2-201ENST00000307142 TSHZ2Q9NRE2 1034 aa12.57□□□□□ -0.4
SYNPO2-201ENST00000307142 SLC12A7Q9Y666 1083 aa12.57□□□□□ -0.4
SYNPO2-201ENST00000307142 QTRT2Q9H974 415 aaKnown RBP12.57□□□□□ -0.4
SYNPO2-201ENST00000307142 TRIM21P19474 475 aaKnown RBP12.57□□□□□ -0.4
SYNPO2-201ENST00000307142 MTHFSDQ2M296 383 aaKnown RBP12.57□□□□□ -0.4
SYNPO2-201ENST00000307142 CNBD1Q8NA66 436 aa12.57□□□□□ -0.4
SYNPO2-201ENST00000307142 TTLL5Q6EMB2 1281 aa12.56□□□□□ -0.4
SYNPO2-201ENST00000307142 DDX11Q96FC9 970 aa12.56□□□□□ -0.4
SYNPO2-201ENST00000307142 MAP3K5Q99683 1374 aa12.56□□□□□ -0.4
SYNPO2-201ENST00000307142 IFIT3O14879 490 aaKnown RBP12.56□□□□□ -0.4
SYNPO2-201ENST00000307142 PTPRKQ15262 1439 aa12.56□□□□□ -0.4
SYNPO2-201ENST00000307142 SAMD9Q5K651 1589 aa12.56□□□□□ -0.4
SYNPO2-201ENST00000307142 KDM6BO15054 1643 aa12.56□□□□□ -0.4
SYNPO2-201ENST00000307142 PLS1Q14651 629 aa12.56□□□□□ -0.4
SYNPO2-201ENST00000307142 GPR162Q16538 588 aa12.56□□□□□ -0.4
SYNPO2-201ENST00000307142 RALGAPBQ86X10 1494 aa12.56□□□□□ -0.4
SYNPO2-201ENST00000307142 ZNF408Q9H9D4 720 aa12.56□□□□□ -0.4
SYNPO2-201ENST00000307142 SMC2O95347 1197 aa12.55□□□□□ -0.4
SYNPO2-201ENST00000307142 UQCRFS1P1P0C7P4 283 aa12.55□□□□□ -0.4
SYNPO2-201ENST00000307142 PRPF40BQ6NWY9 871 aaKnown RBP12.55□□□□□ -0.4
SYNPO2-201ENST00000307142 PRIM1P49642 420 aaKnown RBP12.55□□□□□ -0.4
SYNPO2-201ENST00000307142 EYA3Q99504 573 aa12.55□□□□□ -0.4
SYNPO2-201ENST00000307142 CCDC196A0A1B0GTZ2 297 aa12.55□□□□□ -0.4
SYNPO2-201ENST00000307142 KAT14Q9H8E8 782 aa12.55□□□□□ -0.4
SYNPO2-201ENST00000307142 H0YIN7 160 aa12.55□□□□□ -0.4
SYNPO2-201ENST00000307142 IRS4O14654 1257 aaPredicted RBP12.55□□□□□ -0.4
SYNPO2-201ENST00000307142 RNMTO43148 476 aaKnown RBP12.55□□□□□ -0.4
SYNPO2-201ENST00000307142 TRMT1LQ7Z2T5 733 aaKnown RBP12.54□□□□□ -0.4
SYNPO2-201ENST00000307142 CYP7A1P22680 504 aa12.54□□□□□ -0.4
SYNPO2-201ENST00000307142 RXRBP28702 533 aa12.54□□□□□ -0.4
SYNPO2-201ENST00000307142 CEP57L1Q8IYX8 460 aa12.54□□□□□ -0.4
SYNPO2-201ENST00000307142 POLKQ9UBT6 870 aa12.54□□□□□ -0.4
SYNPO2-201ENST00000307142 CEP131Q9UPN4 1083 aa12.54□□□□□ -0.4
SYNPO2-201ENST00000307142 EYA1Q99502 592 aa12.54□□□□□ -0.4
SYNPO2-201ENST00000307142 TCOF1Q13428 1488 aaKnown RBP12.54□□□□□ -0.4
SYNPO2-201ENST00000307142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.54□□□□□ -0.4
SYNPO2-201ENST00000307142 TSPY3P0CV98 308 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 TSPY8P0CW00 308 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 ZNF772Q68DY9 489 aaPredicted RBP12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 CCDC144CPQ8IYA2 1237 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 A0A1W2PP64 1363 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 GRM8O00222 908 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 YEATS2Q9ULM3 1422 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 COL17A1Q9UMD9 1497 aaPredicted RBP12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 SSRP1Q08945 709 aaKnown RBP12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 MFSD6Q6ZSS7 791 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 JAG2Q9Y219 1238 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 CA8P35219 290 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 ATP2B3Q16720 1220 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 MSL1Q68DK7 614 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 EVI5LQ96CN4 794 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 LIG1P18858 919 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 NLRP5P59047 1200 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 ZSCAN31Q96LW9 406 aaPredicted RBP12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 CCDC87Q9NVE4 849 aa12.53□□□□□ -0.4
SYNPO2-201ENST00000307142 TMEM2Q9UHN6 1383 aa12.52□□□□□ -0.4
SYNPO2-201ENST00000307142 RDXP35241 583 aaKnown RBP12.52□□□□□ -0.4
SYNPO2-201ENST00000307142 SMARCE1Q969G3 411 aa12.52□□□□□ -0.4
SYNPO2-201ENST00000307142 SEPT11Q9NVA2 429 aaKnown RBP12.52□□□□□ -0.4
SYNPO2-201ENST00000307142 BIN2Q9UBW5 565 aaPredicted RBP12.52□□□□□ -0.4
SYNPO2-201ENST00000307142 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.41
SYNPO2-201ENST00000307142 DHX8Q14562 1220 aaKnown RBP12.52□□□□□ -0.41
SYNPO2-201ENST00000307142 NAA16Q6N069 864 aaPredicted RBP12.52□□□□□ -0.41
SYNPO2-201ENST00000307142 UGGT1Q9NYU2 1555 aa12.52□□□□□ -0.41
SYNPO2-201ENST00000307142 LMBR1LQ6UX01 489 aa12.52□□□□□ -0.41
SYNPO2-201ENST00000307142 KSR2Q6VAB6 950 aa12.52□□□□□ -0.41
SYNPO2-201ENST00000307142 CCDC173Q0VFZ6 552 aa12.52□□□□□ -0.41
SYNPO2-201ENST00000307142 SAMM50Q9Y512 469 aa12.52□□□□□ -0.41
SYNPO2-201ENST00000307142 MAP3K19Q56UN5 1328 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms