RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 RAPGEF6Q8TEU7 1601 aa17.8■□□□□ 0.44
DDB1-201ENST00000301764 C8orf76Q96K31 380 aa17.8■□□□□ 0.44
DDB1-201ENST00000301764 GCC2Q8IWJ2 1684 aa17.8■□□□□ 0.44
DDB1-201ENST00000301764 LRRC2Q9BYS8 371 aa17.8■□□□□ 0.44
DDB1-201ENST00000301764 ATP10BO94823 1461 aa17.79■□□□□ 0.44
DDB1-201ENST00000301764 ATP8B2P98198 1209 aa17.79■□□□□ 0.44
DDB1-201ENST00000301764 ANXA1P04083 346 aa17.79■□□□□ 0.44
DDB1-201ENST00000301764 CPLX3Q8WVH0 158 aa17.79■□□□□ 0.44
DDB1-201ENST00000301764 EIF2AK4Q9P2K8 1649 aaKnown RBP17.79■□□□□ 0.44
DDB1-201ENST00000301764 BTBD11A6QL63 1104 aa17.79■□□□□ 0.44
DDB1-201ENST00000301764 POLR3DP05423 398 aaPredicted RBP17.79■□□□□ 0.44
DDB1-201ENST00000301764 KLHL10Q6JEL2 608 aa17.79■□□□□ 0.44
DDB1-201ENST00000301764 NLRP2Q9NX02 1062 aa17.79■□□□□ 0.44
DDB1-201ENST00000301764 ZNF608Q9ULD9 1512 aaPredicted RBP17.78■□□□□ 0.44
DDB1-201ENST00000301764 BRF1Q92994 677 aa17.78■□□□□ 0.44
DDB1-201ENST00000301764 KIAA0754O94854 1291 aa17.78■□□□□ 0.44
DDB1-201ENST00000301764 PLCD3Q8N3E9 789 aa17.78■□□□□ 0.44
DDB1-201ENST00000301764 PI4KAP2A4QPH2 592 aa17.78■□□□□ 0.44
DDB1-201ENST00000301764 PI4KAP1Q8N8J0 262 aa17.78■□□□□ 0.44
DDB1-201ENST00000301764 CCDC150Q8NCX0 1101 aa17.77■□□□□ 0.44
DDB1-201ENST00000301764 XBP1P17861 261 aa17.77■□□□□ 0.44
DDB1-201ENST00000301764 SYT10Q6XYQ8 523 aa17.77■□□□□ 0.44
DDB1-201ENST00000301764 TRIM34Q9BYJ4 488 aa17.77■□□□□ 0.44
DDB1-201ENST00000301764 KIF5CO60282 957 aa17.77■□□□□ 0.43
DDB1-201ENST00000301764 VGLL3A8MV65 326 aa17.77■□□□□ 0.43
DDB1-201ENST00000301764 HSP90AA4PQ58FG1 418 aa17.77■□□□□ 0.43
DDB1-201ENST00000301764 NEK1Q96PY6 1258 aa17.77■□□□□ 0.43
DDB1-201ENST00000301764 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.43
DDB1-201ENST00000301764 CRACR2AQ9BSW2 395 aa17.76■□□□□ 0.43
DDB1-201ENST00000301764 ARFGAP3Q9NP61 516 aa17.76■□□□□ 0.43
DDB1-201ENST00000301764 U3KPZ7 1027 aaPredicted RBP17.76■□□□□ 0.43
DDB1-201ENST00000301764 MCM6Q14566 821 aa17.76■□□□□ 0.43
DDB1-201ENST00000301764 GBP3Q9H0R5 595 aa17.76■□□□□ 0.43
DDB1-201ENST00000301764 ITSN2Q9NZM3 1697 aa17.76■□□□□ 0.43
DDB1-201ENST00000301764 SART3Q15020 963 aaKnown RBP17.75■□□□□ 0.43
DDB1-201ENST00000301764 ZSCAN16Q9H4T2 348 aaPredicted RBP17.75■□□□□ 0.43
DDB1-201ENST00000301764 LMOD1P29536 600 aaPredicted RBP17.75■□□□□ 0.43
DDB1-201ENST00000301764 HSP90AB2PQ58FF8 381 aa17.75■□□□□ 0.43
DDB1-201ENST00000301764 CCDC158Q5M9N0 1113 aa17.75■□□□□ 0.43
DDB1-201ENST00000301764 USHBP1Q8N6Y0 703 aa17.75■□□□□ 0.43
DDB1-201ENST00000301764 BRMS1Q9HCU9 246 aa17.75■□□□□ 0.43
DDB1-201ENST00000301764 MSH6P52701 1360 aa17.75■□□□□ 0.43
DDB1-201ENST00000301764 TXLNBQ8N3L3 684 aa17.75■□□□□ 0.43
DDB1-201ENST00000301764 CCDC12Q8WUD4 166 aaPredicted RBP17.75■□□□□ 0.43
DDB1-201ENST00000301764 ZNHIT6Q9NWK9 470 aaKnown RBP17.75■□□□□ 0.43
DDB1-201ENST00000301764 ADGRL2O95490 1459 aa17.74■□□□□ 0.43
DDB1-201ENST00000301764 ELF2Q15723 593 aa17.74■□□□□ 0.43
DDB1-201ENST00000301764 TRIM22Q8IYM9 498 aa17.74■□□□□ 0.43
DDB1-201ENST00000301764 SYCP2Q9BX26 1530 aa17.74■□□□□ 0.43
DDB1-201ENST00000301764 TTC39AQ5SRH9 613 aa17.74■□□□□ 0.43
DDB1-201ENST00000301764 HSP90AB3PQ58FF7 597 aa17.74■□□□□ 0.43
DDB1-201ENST00000301764 CTNNA3Q9UI47 895 aa17.74■□□□□ 0.43
DDB1-201ENST00000301764 LRMPQ12912 555 aa17.73■□□□□ 0.43
DDB1-201ENST00000301764 RAB11FIP4Q86YS3 637 aa17.73■□□□□ 0.43
DDB1-201ENST00000301764 CBX8Q9HC52 389 aa17.73■□□□□ 0.43
DDB1-201ENST00000301764 UBASH3AP57075 661 aa17.73■□□□□ 0.43
DDB1-201ENST00000301764 GABPB1Q06547 395 aaPredicted RBP17.73■□□□□ 0.43
DDB1-201ENST00000301764 G2E3Q7L622 706 aa17.73■□□□□ 0.43
DDB1-201ENST00000301764 CEP89Q96ST8 783 aa17.73■□□□□ 0.43
DDB1-201ENST00000301764 PALD1Q9ULE6 856 aa17.73■□□□□ 0.43
DDB1-201ENST00000301764 USP16Q9Y5T5 823 aa17.73■□□□□ 0.43
DDB1-201ENST00000301764 WASLO00401 505 aaPredicted RBP17.73■□□□□ 0.43
DDB1-201ENST00000301764 DMTNQ08495 405 aa17.73■□□□□ 0.43
DDB1-201ENST00000301764 TBC1D2BQ9UPU7 963 aa17.73■□□□□ 0.43
DDB1-201ENST00000301764 ERO1AQ96HE7 468 aa17.73■□□□□ 0.43
DDB1-201ENST00000301764 CENPHQ9H3R5 247 aa17.73■□□□□ 0.43
DDB1-201ENST00000301764 MAGEC2Q9UBF1 373 aaPredicted RBP17.73■□□□□ 0.43
DDB1-201ENST00000301764 A0A1W2PP64 1363 aa17.72■□□□□ 0.43
DDB1-201ENST00000301764 IBTKQ9P2D0 1353 aaPredicted RBP17.72■□□□□ 0.43
DDB1-201ENST00000301764 CDR1P51861 262 aa17.72■□□□□ 0.43
DDB1-201ENST00000301764 CNNM3Q8NE01 707 aa17.72■□□□□ 0.43
DDB1-201ENST00000301764 NSFL1CQ9UNZ2 370 aaKnown RBP17.72■□□□□ 0.43
DDB1-201ENST00000301764 PIP4K2AP48426 406 aaPredicted RBP17.72■□□□□ 0.43
DDB1-201ENST00000301764 SLC26A8Q96RN1 970 aa17.72■□□□□ 0.43
DDB1-201ENST00000301764 USP8P40818 1118 aa17.72■□□□□ 0.43
DDB1-201ENST00000301764 DHX37Q8IY37 1157 aaKnown RBP17.72■□□□□ 0.43
DDB1-201ENST00000301764 NUP133Q8WUM0 1156 aa17.72■□□□□ 0.43
DDB1-201ENST00000301764 CDKL5O76039 1030 aa17.71■□□□□ 0.43
DDB1-201ENST00000301764 TRHP20396 242 aaPredicted RBP17.71■□□□□ 0.43
DDB1-201ENST00000301764 GTF2E1P29083 439 aaPredicted RBP17.71■□□□□ 0.43
DDB1-201ENST00000301764 MTMR7Q9Y216 660 aa17.71■□□□□ 0.43
DDB1-201ENST00000301764 HMGB1P09429 215 aaKnown RBP17.71■□□□□ 0.43
DDB1-201ENST00000301764 IBSPP21815 317 aaPredicted RBP17.71■□□□□ 0.43
DDB1-201ENST00000301764 IMMTQ16891 758 aaKnown RBP17.71■□□□□ 0.43
DDB1-201ENST00000301764 CCDC181Q5TID7 509 aa17.71■□□□□ 0.43
DDB1-201ENST00000301764 PYCARDQ9ULZ3 195 aa17.71■□□□□ 0.43
DDB1-201ENST00000301764 ZNF75DP51815 510 aa17.71■□□□□ 0.43
DDB1-201ENST00000301764 C10orf67Q8IYJ2 551 aa17.71■□□□□ 0.43
DDB1-201ENST00000301764 RNF216Q9NWF9 866 aaPredicted RBP17.71■□□□□ 0.43
DDB1-201ENST00000301764 VPS53Q5VIR6 699 aa17.71■□□□□ 0.43
DDB1-201ENST00000301764 RAI14Q9P0K7 980 aa17.71■□□□□ 0.43
DDB1-201ENST00000301764 IFNKQ9P0W0 207 aa17.71■□□□□ 0.43
DDB1-201ENST00000301764 GPATCH11Q8N954 259 aa17.7■□□□□ 0.42
DDB1-201ENST00000301764 SNX14Q9Y5W7 946 aa17.7■□□□□ 0.42
DDB1-201ENST00000301764 SHANK2Q9UPX8 1470 aa17.7■□□□□ 0.42
DDB1-201ENST00000301764 MRPS27Q92552 414 aaKnown RBP17.7■□□□□ 0.42
DDB1-201ENST00000301764 ORC3Q9UBD5 711 aaPredicted RBP17.7■□□□□ 0.42
DDB1-201ENST00000301764 LAMC3Q9Y6N6 1575 aa17.7■□□□□ 0.42
DDB1-201ENST00000301764 GOLGA8BA8MQT2 603 aa17.7■□□□□ 0.42
DDB1-201ENST00000301764 CCDC82Q8N4S0 544 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms