RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 WDR33Q9C0J8 1336 aaKnown RBP16.39■□□□□ 0.21
CDH8-201ENST00000299345 ZSCAN23Q3MJ62 389 aa16.39■□□□□ 0.21
CDH8-201ENST00000299345 EVI5LQ96CN4 794 aa16.39■□□□□ 0.21
CDH8-201ENST00000299345 FSD1Q9BTV5 496 aa16.39■□□□□ 0.21
CDH8-201ENST00000299345 SMC3Q9UQE7 1217 aa16.39■□□□□ 0.21
CDH8-201ENST00000299345 CASTP20810 708 aaKnown RBP16.39■□□□□ 0.21
CDH8-201ENST00000299345 CABP4P57796 275 aa16.39■□□□□ 0.21
CDH8-201ENST00000299345 CUL4AQ13619 759 aa16.39■□□□□ 0.21
CDH8-201ENST00000299345 SYAP1Q96A49 352 aaPredicted RBP16.39■□□□□ 0.21
CDH8-201ENST00000299345 LARP6Q9BRS8 491 aaKnown RBP16.39■□□□□ 0.21
CDH8-201ENST00000299345 RRAGDQ9NQL2 400 aaPredicted RBP16.39■□□□□ 0.21
CDH8-201ENST00000299345 IL25Q9H293 177 aa16.39■□□□□ 0.21
CDH8-201ENST00000299345 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.39■□□□□ 0.21
CDH8-201ENST00000299345 SNX14Q9Y5W7 946 aa16.39■□□□□ 0.21
CDH8-201ENST00000299345 LRRC37A3O60309 1634 aa16.38■□□□□ 0.21
CDH8-201ENST00000299345 HIP1O00291 1037 aa16.38■□□□□ 0.21
CDH8-201ENST00000299345 PRPF40BQ6NWY9 871 aaKnown RBP16.38■□□□□ 0.21
CDH8-201ENST00000299345 CHAMP1Q96JM3 812 aa16.38■□□□□ 0.21
CDH8-201ENST00000299345 JAKMIP1Q96N16 626 aaKnown RBP16.38■□□□□ 0.21
CDH8-201ENST00000299345 ZDHHC9Q9Y397 364 aa16.38■□□□□ 0.21
CDH8-201ENST00000299345 SNRPA1P09661 255 aaKnown RBP16.38■□□□□ 0.21
CDH8-201ENST00000299345 ANKRD13DQ6ZTN6 518 aa16.38■□□□□ 0.21
CDH8-201ENST00000299345 BOLA2Q9H3K6 86 aa16.38■□□□□ 0.21
CDH8-201ENST00000299345 RBM27Q9P2N5 1060 aaKnown RBP16.38■□□□□ 0.21
CDH8-201ENST00000299345 CHMP3Q9Y3E7 222 aa16.38■□□□□ 0.21
CDH8-201ENST00000299345 FAM208AQ9UK61 1670 aaKnown RBP16.38■□□□□ 0.21
CDH8-201ENST00000299345 PXDNQ92626 1479 aa16.38■□□□□ 0.21
CDH8-201ENST00000299345 ZNF496Q96IT1 587 aaPredicted RBP16.37■□□□□ 0.21
CDH8-201ENST00000299345 LIMCH1Q9UPQ0 1083 aa16.37■□□□□ 0.21
CDH8-201ENST00000299345 PHKG2P15735 406 aa16.37■□□□□ 0.21
CDH8-201ENST00000299345 PIP4K2AP48426 406 aaPredicted RBP16.37■□□□□ 0.21
CDH8-201ENST00000299345 LTN1O94822 1766 aa16.37■□□□□ 0.21
CDH8-201ENST00000299345 CCDC173Q0VFZ6 552 aa16.37■□□□□ 0.21
CDH8-201ENST00000299345 FMNL2Q96PY5 1086 aa16.37■□□□□ 0.21
CDH8-201ENST00000299345 CYP46A1Q9Y6A2 500 aa16.37■□□□□ 0.21
CDH8-201ENST00000299345 BRD1O95696 1058 aa16.36■□□□□ 0.21
CDH8-201ENST00000299345 LSG1Q9H089 658 aaKnown RBP16.36■□□□□ 0.21
CDH8-201ENST00000299345 CADPS2Q86UW7 1296 aa16.36■□□□□ 0.21
CDH8-201ENST00000299345 JARID2Q92833 1246 aaPredicted RBP16.36■□□□□ 0.21
CDH8-201ENST00000299345 CACNA1FO60840 1977 aa16.36■□□□□ 0.21
CDH8-201ENST00000299345 C1orf167Q5SNV9 1468 aa16.36■□□□□ 0.21
CDH8-201ENST00000299345 ESPNB1AK53 854 aa16.36■□□□□ 0.21
CDH8-201ENST00000299345 NAP1L5Q96NT1 182 aaPredicted RBP16.36■□□□□ 0.21
CDH8-201ENST00000299345 CHD2O14647 1828 aaKnown RBP16.36■□□□□ 0.21
CDH8-201ENST00000299345 AK2P54819 239 aa16.35■□□□□ 0.21
CDH8-201ENST00000299345 DCAF5Q96JK2 942 aa16.35■□□□□ 0.21
CDH8-201ENST00000299345 PDRG1Q9NUG6 133 aa16.35■□□□□ 0.21
CDH8-201ENST00000299345 RNF20Q5VTR2 975 aa16.35■□□□□ 0.21
CDH8-201ENST00000299345 RASEFQ8IZ41 740 aa16.35■□□□□ 0.21
CDH8-201ENST00000299345 KLHDC4Q8TBB5 520 aa16.35■□□□□ 0.21
CDH8-201ENST00000299345 SYCE3A1L190 88 aa16.34■□□□□ 0.21
CDH8-201ENST00000299345 ZNF445P59923 1031 aa16.34■□□□□ 0.21
CDH8-201ENST00000299345 DDX54Q8TDD1 881 aaKnown RBP16.34■□□□□ 0.21
CDH8-201ENST00000299345 EAF2Q96CJ1 260 aaPredicted RBP16.34■□□□□ 0.21
CDH8-201ENST00000299345 ATP6V1DQ9Y5K8 247 aa16.34■□□□□ 0.21
CDH8-201ENST00000299345 CPA1P15085 419 aa16.34■□□□□ 0.21
CDH8-201ENST00000299345 GCKRQ14397 625 aa16.34■□□□□ 0.21
CDH8-201ENST00000299345 METTL22Q9BUU2 404 aaPredicted RBP16.34■□□□□ 0.21
CDH8-201ENST00000299345 ANO8Q9HCE9 1232 aaPredicted RBP16.34■□□□□ 0.21
CDH8-201ENST00000299345 UBE3BQ7Z3V4 1068 aa16.34■□□□□ 0.21
CDH8-201ENST00000299345 GDPD2Q9HCC8 539 aa16.34■□□□□ 0.21
CDH8-201ENST00000299345 CCDC9Q9Y3X0 531 aaKnown RBP16.34■□□□□ 0.21
CDH8-201ENST00000299345 USP16Q9Y5T5 823 aa16.34■□□□□ 0.21
CDH8-201ENST00000299345 TMEM94Q12767 1356 aa16.34■□□□□ 0.21
CDH8-201ENST00000299345 NEURL1BA8MQ27 555 aa16.33■□□□□ 0.21
CDH8-201ENST00000299345 ATP5J2-PTCD1G3V325 749 aa16.33■□□□□ 0.21
CDH8-201ENST00000299345 PTCD1O75127 700 aaKnown RBP16.33■□□□□ 0.21
CDH8-201ENST00000299345 GPT2Q8TD30 523 aa16.33■□□□□ 0.2
CDH8-201ENST00000299345 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.33■□□□□ 0.2
CDH8-201ENST00000299345 IGKV5-2P06315 115 aa16.33■□□□□ 0.2
CDH8-201ENST00000299345 PRDM11Q9NQV5 511 aa16.33■□□□□ 0.2
CDH8-201ENST00000299345 A0A087WZG4 1122 aa16.32■□□□□ 0.2
CDH8-201ENST00000299345 PHF14O94880 888 aa16.32■□□□□ 0.2
CDH8-201ENST00000299345 PSMA5P28066 241 aa16.32■□□□□ 0.2
CDH8-201ENST00000299345 CCDC83Q8IWF9 413 aa16.32■□□□□ 0.2
CDH8-201ENST00000299345 OVOS2A0A0G2JMS6 1433 aa16.32■□□□□ 0.2
CDH8-201ENST00000299345 USP42Q9H9J4 1324 aaKnown RBP16.32■□□□□ 0.2
CDH8-201ENST00000299345 SASH1O94885 1247 aa16.32■□□□□ 0.2
CDH8-201ENST00000299345 MSNP26038 577 aaKnown RBP16.32■□□□□ 0.2
CDH8-201ENST00000299345 PRIM1P49642 420 aaKnown RBP16.32■□□□□ 0.2
CDH8-201ENST00000299345 PTH1RQ03431 593 aa16.32■□□□□ 0.2
CDH8-201ENST00000299345 TOM1L2Q6ZVM7 507 aa16.32■□□□□ 0.2
CDH8-201ENST00000299345 NMIQ13287 307 aaPredicted RBP16.32■□□□□ 0.2
CDH8-201ENST00000299345 ZSCAN31Q96LW9 406 aaPredicted RBP16.32■□□□□ 0.2
CDH8-201ENST00000299345 AK9Q5TCS8 1911 aa16.32■□□□□ 0.2
CDH8-201ENST00000299345 RBM8AQ9Y5S9 174 aaKnown RBP16.31■□□□□ 0.2
CDH8-201ENST00000299345 PDIA6Q15084 440 aa16.31■□□□□ 0.2
CDH8-201ENST00000299345 RNF214Q8ND24 703 aa16.31■□□□□ 0.2
CDH8-201ENST00000299345 ZNF330Q9Y3S2 320 aaPredicted RBP16.31■□□□□ 0.2
CDH8-201ENST00000299345 CCDC171Q6TFL3 1326 aa16.31■□□□□ 0.2
CDH8-201ENST00000299345 VPS37CA5D8V6 355 aaPredicted RBP16.31■□□□□ 0.2
CDH8-201ENST00000299345 FAM227BQ96M60 508 aa16.31■□□□□ 0.2
CDH8-201ENST00000299345 STX6O43752 255 aa16.3■□□□□ 0.2
CDH8-201ENST00000299345 FGD1P98174 961 aa16.3■□□□□ 0.2
CDH8-201ENST00000299345 DNAJC2Q99543 621 aaKnown RBP16.3■□□□□ 0.2
CDH8-201ENST00000299345 TMEM63CQ9P1W3 806 aa16.3■□□□□ 0.2
CDH8-201ENST00000299345 MARF1Q9Y4F3 1742 aaKnown RBP16.3■□□□□ 0.2
CDH8-201ENST00000299345 CLCN1P35523 988 aa16.3■□□□□ 0.2
CDH8-201ENST00000299345 KAZALD1Q96I82 304 aa16.29■□□□□ 0.2
CDH8-201ENST00000299345 SH2B1Q9NRF2 756 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms