RNA–Protein interactions for RNA: ENST00000296440.10

PLXNB1-201, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,143 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-201ENST00000296440 APBB1IPQ7Z5R6 666 aaPredicted RBP15.27■□□□□ 0.03
PLXNB1-201ENST00000296440 ZNF526Q8TF50 670 aaPredicted RBP15.27■□□□□ 0.03
PLXNB1-201ENST00000296440 SP4Q02446 784 aa15.27■□□□□ 0.03
PLXNB1-201ENST00000296440 TRAF1Q13077 416 aa15.27■□□□□ 0.03
PLXNB1-201ENST00000296440 ZGPATQ8N5A5 531 aaKnown RBP15.27■□□□□ 0.03
PLXNB1-201ENST00000296440 NLRP3Q96P20 1036 aa15.27■□□□□ 0.03
PLXNB1-201ENST00000296440 RIOK3O14730 519 aaKnown RBP15.26■□□□□ 0.03
PLXNB1-201ENST00000296440 KRT85P78386 507 aa15.26■□□□□ 0.03
PLXNB1-201ENST00000296440 TDRD12Q587J7 1177 aaKnown RBP15.26■□□□□ 0.03
PLXNB1-201ENST00000296440 PRKG1Q13976 671 aa15.26■□□□□ 0.03
PLXNB1-201ENST00000296440 TSR2Q969E8 191 aaKnown RBP15.26■□□□□ 0.03
PLXNB1-201ENST00000296440 GTF3C6Q969F1 213 aa15.26■□□□□ 0.03
PLXNB1-201ENST00000296440 CCDC148Q8NFR7 591 aa15.26■□□□□ 0.03
PLXNB1-201ENST00000296440 SREK1Q8WXA9 508 aaKnown RBP15.26■□□□□ 0.03
PLXNB1-201ENST00000296440 SMARCC1Q92922 1105 aaPredicted RBP15.26■□□□□ 0.03
PLXNB1-201ENST00000296440 NYXQ9GZU5 481 aa15.26■□□□□ 0.03
PLXNB1-201ENST00000296440 AQRO60306 1485 aaKnown RBP eCLIP15.25■□□□□ 0.033e-7■■■■■ 35
PLXNB1-201ENST00000296440 ZNF644Q9H582 1327 aaPredicted RBP15.25■□□□□ 0.03
PLXNB1-201ENST00000296440 LDHAL6AQ6ZMR3 332 aa15.25■□□□□ 0.03
PLXNB1-201ENST00000296440 PPP1R14CQ8TAE6 165 aa15.25■□□□□ 0.03
PLXNB1-201ENST00000296440 TCP11L1Q9NUJ3 509 aa15.25■□□□□ 0.03
PLXNB1-201ENST00000296440 STX8Q9UNK0 236 aa15.25■□□□□ 0.03
PLXNB1-201ENST00000296440 IMPG2Q9BZV3 1241 aa15.25■□□□□ 0.03
PLXNB1-201ENST00000296440 BOLA2Q9H3K6 86 aa15.25■□□□□ 0.03
PLXNB1-201ENST00000296440 PPP4R3BQ5MIZ7 849 aa15.25■□□□□ 0.03
PLXNB1-201ENST00000296440 CCDC40Q4G0X9 1142 aa15.25■□□□□ 0.03
PLXNB1-201ENST00000296440 AMPD3Q01432 767 aa15.25■□□□□ 0.03
PLXNB1-201ENST00000296440 SLC12A5Q9H2X9 1139 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 AMOTL2Q9Y2J4 779 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 SMARCC2Q8TAQ2 1214 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 ZBTB21Q9ULJ3 1066 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 PRPF4BQ13523 1007 aaKnown RBP15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 USP37Q86T82 979 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 ERLIN1O75477 346 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 IDEP14735 1019 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 IFFO1Q0D2I5 559 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 DPY19L2Q6NUT2 758 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 GCC1Q96CN9 775 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 IKBKGQ9Y6K9 419 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 CAVIN1Q6NZI2 390 aaKnown RBP15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 EYA3Q99504 573 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 SERPINA10Q9UK55 444 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 PRPF40AO75400 957 aaKnown RBP15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 CCDC192P0DO97 292 aa15.24■□□□□ 0.03
PLXNB1-201ENST00000296440 CALM1P0DP23 149 aa15.23■□□□□ 0.03
PLXNB1-201ENST00000296440 CALM2P0DP24 149 aa15.23■□□□□ 0.03
PLXNB1-201ENST00000296440 CALM3P0DP25 149 aa15.23■□□□□ 0.03
PLXNB1-201ENST00000296440 BAG6P46379 1132 aa15.23■□□□□ 0.03
PLXNB1-201ENST00000296440 CCDC144CPQ8IYA2 1237 aa15.23■□□□□ 0.03
PLXNB1-201ENST00000296440 SMTNL1A8MU46 457 aa15.23■□□□□ 0.03
PLXNB1-201ENST00000296440 TTF1Q15361 905 aaPredicted RBP15.23■□□□□ 0.03
PLXNB1-201ENST00000296440 ERMNQ8TAM6 284 aa15.23■□□□□ 0.03
PLXNB1-201ENST00000296440 GCOM1H8Y6P7 765 aaPredicted RBP15.23■□□□□ 0.03
PLXNB1-201ENST00000296440 MYZAPP0CAP1 466 aa15.23■□□□□ 0.03
PLXNB1-201ENST00000296440 M0QZ92 97 aa15.23■□□□□ 0.03
PLXNB1-201ENST00000296440 LUZP1Q86V48 1076 aa15.23■□□□□ 0.03
PLXNB1-201ENST00000296440 TAOK3Q9H2K8 898 aa15.23■□□□□ 0.03
PLXNB1-201ENST00000296440 BCCIPQ9P287 314 aaKnown RBP eCLIP15.23■□□□□ 0.03
PLXNB1-201ENST00000296440 GOLGA8AA7E2F4 631 aa15.22■□□□□ 0.03
PLXNB1-201ENST00000296440 GOLGA8BA8MQT2 603 aa15.22■□□□□ 0.03
PLXNB1-201ENST00000296440 SPC25Q9HBM1 224 aa15.22■□□□□ 0.03
PLXNB1-201ENST00000296440 CWC25Q9NXE8 425 aaPredicted RBP15.22■□□□□ 0.03
PLXNB1-201ENST00000296440 BACH1O14867 736 aa15.22■□□□□ 0.03
PLXNB1-201ENST00000296440 PRKCSHP14314 528 aaPredicted RBP15.22■□□□□ 0.03
PLXNB1-201ENST00000296440 CNGA1P29973 690 aa15.22■□□□□ 0.03
PLXNB1-201ENST00000296440 ARHGEF6Q15052 776 aa15.22■□□□□ 0.03
PLXNB1-201ENST00000296440 TMCO5BA8MYB1 307 aa15.22■□□□□ 0.03
PLXNB1-201ENST00000296440 ARID5AQ03989 594 aa15.22■□□□□ 0.03
PLXNB1-201ENST00000296440 RNF34Q969K3 372 aa15.21■□□□□ 0.03
PLXNB1-201ENST00000296440 TRIM6Q9C030 488 aaPredicted RBP15.21■□□□□ 0.03
PLXNB1-201ENST00000296440 ARHGAP29Q52LW3 1261 aa15.21■□□□□ 0.03
PLXNB1-201ENST00000296440 WAPLQ7Z5K2 1190 aa15.21■□□□□ 0.03
PLXNB1-201ENST00000296440 TBC1D5Q92609 795 aa15.21■□□□□ 0.03
PLXNB1-201ENST00000296440 FSD2A1L4K1 749 aa15.21■□□□□ 0.03
PLXNB1-201ENST00000296440 NAIPQ13075 1403 aa15.21■□□□□ 0.03
PLXNB1-201ENST00000296440 AKNAD1Q5T1N1 836 aa15.21■□□□□ 0.03
PLXNB1-201ENST00000296440 CASTP20810 708 aaKnown RBP15.21■□□□□ 0.03
PLXNB1-201ENST00000296440 UPF3BQ9BZI7 483 aaKnown RBP15.21■□□□□ 0.03
PLXNB1-201ENST00000296440 GINS2Q9Y248 185 aa15.21■□□□□ 0.03
PLXNB1-201ENST00000296440 IFNL2Q8IZJ0 200 aa15.21■□□□□ 0.02
PLXNB1-201ENST00000296440 FAM200AQ8TCP9 573 aa15.21■□□□□ 0.02
PLXNB1-201ENST00000296440 NIP7Q9Y221 180 aaKnown RBP eCLIP15.21■□□□□ 0.02
PLXNB1-201ENST00000296440 MTIF2P46199 727 aaKnown RBP15.2■□□□□ 0.02
PLXNB1-201ENST00000296440 TAF7Q15545 349 aaPredicted RBP15.2■□□□□ 0.02
PLXNB1-201ENST00000296440 CCDC61Q9Y6R9 512 aa15.2■□□□□ 0.02
PLXNB1-201ENST00000296440 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.2■□□□□ 0.02
PLXNB1-201ENST00000296440 GABPAQ06546 454 aa15.2■□□□□ 0.02
PLXNB1-201ENST00000296440 MVPQ14764 893 aaKnown RBP15.2■□□□□ 0.02
PLXNB1-201ENST00000296440 CFAP100Q494V2 611 aa15.2■□□□□ 0.02
PLXNB1-201ENST00000296440 HYPKQ9NX55 129 aa15.2■□□□□ 0.02
PLXNB1-201ENST00000296440 CEP83Q9Y592 693 aa15.2■□□□□ 0.02
PLXNB1-201ENST00000296440 ERBINQ96RT1 1412 aa15.19■□□□□ 0.02
PLXNB1-201ENST00000296440 GAS8O95995 478 aa15.19■□□□□ 0.02
PLXNB1-201ENST00000296440 ARHGAP27Q6ZUM4 889 aa15.19■□□□□ 0.02
PLXNB1-201ENST00000296440 RBM17Q96I25 401 aaKnown RBP15.19■□□□□ 0.02
PLXNB1-201ENST00000296440 FCHSD2O94868 740 aa15.19■□□□□ 0.02
PLXNB1-201ENST00000296440 KRT13P13646 458 aa15.19■□□□□ 0.02
PLXNB1-201ENST00000296440 NBPF3Q9H094 633 aa15.19■□□□□ 0.02
PLXNB1-201ENST00000296440 MFSD6Q6ZSS7 791 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms