RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 BRF1Q92994 677 aa21.58■■□□□ 1.04
ITGB5-201ENST00000296181 CWC15Q9P013 229 aaKnown RBP21.58■■□□□ 1.04
ITGB5-201ENST00000296181 RAB11FIP4Q86YS3 637 aa21.57■■□□□ 1.04
ITGB5-201ENST00000296181 GPT2Q8TD30 523 aa21.57■■□□□ 1.04
ITGB5-201ENST00000296181 ACBD3Q9H3P7 528 aa21.57■■□□□ 1.04
ITGB5-201ENST00000296181 POLR3DP05423 398 aaPredicted RBP21.57■■□□□ 1.04
ITGB5-201ENST00000296181 ERBB4Q15303 1308 aa21.57■■□□□ 1.04
ITGB5-201ENST00000296181 DBF4Q9UBU7 674 aaPredicted RBP21.56■■□□□ 1.04
ITGB5-201ENST00000296181 FILIP1LQ4L180 1135 aa21.56■■□□□ 1.04
ITGB5-201ENST00000296181 PPFIBP1Q86W92 1011 aa21.56■■□□□ 1.04
ITGB5-201ENST00000296181 PUS7Q96PZ0 661 aaKnown RBP21.56■■□□□ 1.04
ITGB5-201ENST00000296181 MYD88Q99836 296 aa21.56■■□□□ 1.04
ITGB5-201ENST00000296181 SMTNL1A8MU46 457 aa21.56■■□□□ 1.04
ITGB5-201ENST00000296181 NAP1L1P55209 391 aaKnown RBP21.56■■□□□ 1.04
ITGB5-201ENST00000296181 CAGE1Q8TC20 777 aa21.56■■□□□ 1.04
ITGB5-201ENST00000296181 CEP126Q9P2H0 1117 aa21.56■■□□□ 1.04
ITGB5-201ENST00000296181 LEKR1Q6ZMV7 388 aa21.55■■□□□ 1.04
ITGB5-201ENST00000296181 CHPF2Q9P2E5 772 aa21.55■■□□□ 1.04
ITGB5-201ENST00000296181 C8orf76Q96K31 380 aa21.55■■□□□ 1.04
ITGB5-201ENST00000296181 KIF2AO00139 706 aaPredicted RBP21.55■■□□□ 1.04
ITGB5-201ENST00000296181 NEK1Q96PY6 1258 aa21.55■■□□□ 1.04
ITGB5-201ENST00000296181 TBC1D2BQ9UPU7 963 aa21.54■■□□□ 1.04
ITGB5-201ENST00000296181 U3KPZ7 1027 aaPredicted RBP21.54■■□□□ 1.04
ITGB5-201ENST00000296181 CBFA2T2O43439 604 aa21.54■■□□□ 1.04
ITGB5-201ENST00000296181 PNMA6EA0A0J9YXQ4 647 aa21.54■■□□□ 1.04
ITGB5-201ENST00000296181 STX1AQ16623 288 aa21.54■■□□□ 1.04
ITGB5-201ENST00000296181 AK7Q96M32 723 aa21.54■■□□□ 1.04
ITGB5-201ENST00000296181 SNW1Q13573 536 aaKnown RBP21.53■■□□□ 1.04
ITGB5-201ENST00000296181 NOM1Q5C9Z4 860 aaKnown RBP21.53■■□□□ 1.04
ITGB5-201ENST00000296181 PALD1Q9ULE6 856 aa21.53■■□□□ 1.04
ITGB5-201ENST00000296181 CTAGE5O15320 804 aa21.53■■□□□ 1.04
ITGB5-201ENST00000296181 CCDC82Q8N4S0 544 aa21.53■■□□□ 1.04
ITGB5-201ENST00000296181 MAST1Q9Y2H9 1570 aa21.53■■□□□ 1.04
ITGB5-201ENST00000296181 GTF2F1P35269 517 aaKnown RBP eCLIP21.53■■□□□ 1.046e-8■■■■■ 29.8
ITGB5-201ENST00000296181 VPS37DQ86XT2 251 aa21.53■■□□□ 1.04
ITGB5-201ENST00000296181 PAXBP1Q9Y5B6 917 aa21.53■■□□□ 1.04
ITGB5-201ENST00000296181 PLA2R1Q13018 1463 aa21.53■■□□□ 1.04
ITGB5-201ENST00000296181 RUFY1Q96T51 708 aa21.52■■□□□ 1.04
ITGB5-201ENST00000296181 BRD1O95696 1058 aa21.52■■□□□ 1.04
ITGB5-201ENST00000296181 SART3Q15020 963 aaKnown RBP21.52■■□□□ 1.04
ITGB5-201ENST00000296181 NUP133Q8WUM0 1156 aa21.52■■□□□ 1.04
ITGB5-201ENST00000296181 PIBF1Q8WXW3 757 aa21.52■■□□□ 1.04
ITGB5-201ENST00000296181 PHAXQ9H814 394 aaKnown RBP21.52■■□□□ 1.04
ITGB5-201ENST00000296181 TTC21BQ7Z4L5 1316 aa21.52■■□□□ 1.04
ITGB5-201ENST00000296181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.52■■□□□ 1.04
ITGB5-201ENST00000296181 SLC3A2P08195 630 aaKnown RBP21.52■■□□□ 1.04
ITGB5-201ENST00000296181 LARP1Q6PKG0 1096 aaKnown RBP21.52■■□□□ 1.04
ITGB5-201ENST00000296181 PIK3R4Q99570 1358 aa21.52■■□□□ 1.04
ITGB5-201ENST00000296181 IL13P35225 146 aa21.52■■□□□ 1.03
ITGB5-201ENST00000296181 AXDND1Q5T1B0 1012 aaPredicted RBP21.52■■□□□ 1.03
ITGB5-201ENST00000296181 DDX46Q7L014 1031 aaKnown RBP21.52■■□□□ 1.03
ITGB5-201ENST00000296181 ANKLE2Q86XL3 938 aa21.52■■□□□ 1.03
ITGB5-201ENST00000296181 RIOK3O14730 519 aaKnown RBP21.51■■□□□ 1.03
ITGB5-201ENST00000296181 NEMFO60524 1076 aa21.51■■□□□ 1.03
ITGB5-201ENST00000296181 HAND2P61296 217 aa21.51■■□□□ 1.03
ITGB5-201ENST00000296181 KLHL10Q6JEL2 608 aa21.51■■□□□ 1.03
ITGB5-201ENST00000296181 ZBTB9Q96C00 473 aa21.51■■□□□ 1.03
ITGB5-201ENST00000296181 TOP1P11387 765 aaKnown RBP21.51■■□□□ 1.03
ITGB5-201ENST00000296181 TATP17735 454 aaPredicted RBP21.51■■□□□ 1.03
ITGB5-201ENST00000296181 CCDC57Q2TAC2 916 aa21.51■■□□□ 1.03
ITGB5-201ENST00000296181 HSP90AA4PQ58FG1 418 aa21.51■■□□□ 1.03
ITGB5-201ENST00000296181 CNNM1Q9NRU3 951 aa21.51■■□□□ 1.03
ITGB5-201ENST00000296181 CTNNA3Q9UI47 895 aa21.51■■□□□ 1.03
ITGB5-201ENST00000296181 MYRIPQ8NFW9 859 aa21.5■■□□□ 1.03
ITGB5-201ENST00000296181 ZSWIM4Q9H7M6 989 aa21.5■■□□□ 1.03
ITGB5-201ENST00000296181 XBP1P17861 261 aa21.5■■□□□ 1.03
ITGB5-201ENST00000296181 SETQ01105 290 aaPredicted RBP21.5■■□□□ 1.03
ITGB5-201ENST00000296181 PPIP5K1Q6PFW1 1433 aa21.5■■□□□ 1.03
ITGB5-201ENST00000296181 STRN4Q9NRL3 753 aa21.5■■□□□ 1.03
ITGB5-201ENST00000296181 GOLIM4O00461 696 aa21.5■■□□□ 1.03
ITGB5-201ENST00000296181 U2AF2P26368 475 aaKnown RBP eCLIP21.5■■□□□ 1.036e-6■□□□□ 8.6
ITGB5-201ENST00000296181 SMARCE1Q969G3 411 aa21.5■■□□□ 1.03
ITGB5-201ENST00000296181 DHX8Q14562 1220 aaKnown RBP21.5■■□□□ 1.03
ITGB5-201ENST00000296181 CCDC47Q96A33 483 aaKnown RBP21.5■■□□□ 1.03
ITGB5-201ENST00000296181 SNRKQ9NRH2 765 aa21.5■■□□□ 1.03
ITGB5-201ENST00000296181 IDH1O75874 414 aaKnown RBP21.49■■□□□ 1.03
ITGB5-201ENST00000296181 IMMTQ16891 758 aaKnown RBP21.49■■□□□ 1.03
ITGB5-201ENST00000296181 CCDC102AQ96A19 550 aa21.49■■□□□ 1.03
ITGB5-201ENST00000296181 ZNF500O60304 480 aaPredicted RBP21.49■■□□□ 1.03
ITGB5-201ENST00000296181 CABP4P57796 275 aa21.49■■□□□ 1.03
ITGB5-201ENST00000296181 TRIM22Q8IYM9 498 aa21.49■■□□□ 1.03
ITGB5-201ENST00000296181 SOS1Q07889 1333 aaPredicted RBP21.49■■□□□ 1.03
ITGB5-201ENST00000296181 ATP5J2-PTCD1G3V325 749 aa21.49■■□□□ 1.03
ITGB5-201ENST00000296181 PTCD1O75127 700 aaKnown RBP21.49■■□□□ 1.03
ITGB5-201ENST00000296181 IFIT1P09914 478 aaKnown RBP21.49■■□□□ 1.03
ITGB5-201ENST00000296181 CPLX3Q8WVH0 158 aa21.49■■□□□ 1.03
ITGB5-201ENST00000296181 NPHP3Q7Z494 1330 aa21.49■■□□□ 1.03
ITGB5-201ENST00000296181 ZMYM3Q14202 1370 aa21.49■■□□□ 1.03
ITGB5-201ENST00000296181 NMIQ13287 307 aaPredicted RBP21.48■■□□□ 1.03
ITGB5-201ENST00000296181 VPS53Q5VIR6 699 aa21.48■■□□□ 1.03
ITGB5-201ENST00000296181 PLEKHF1Q96S99 279 aa21.48■■□□□ 1.03
ITGB5-201ENST00000296181 PHF8Q9UPP1 1060 aa21.48■■□□□ 1.03
ITGB5-201ENST00000296181 KRT222Q8N1A0 295 aa21.48■■□□□ 1.03
ITGB5-201ENST00000296181 ADGBQ8N7X0 1667 aa21.48■■□□□ 1.03
ITGB5-201ENST00000296181 TERF1P54274 439 aa21.48■■□□□ 1.03
ITGB5-201ENST00000296181 AOPEPQ8N6M6 819 aa21.48■■□□□ 1.03
ITGB5-201ENST00000296181 GSDMDP57764 484 aa21.48■■□□□ 1.03
ITGB5-201ENST00000296181 UBE3BQ7Z3V4 1068 aa21.48■■□□□ 1.03
ITGB5-201ENST00000296181 SNX14Q9Y5W7 946 aa21.48■■□□□ 1.03
ITGB5-201ENST00000296181 SAMD9LQ8IVG5 1584 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms