RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 RBM6P78332 1123 aaKnown RBP20.44■□□□□ 0.86
LRRC56-201ENST00000270115 PLA2G4DQ86XP0 818 aa20.44■□□□□ 0.86
LRRC56-201ENST00000270115 AEBP1Q8IUX7 1158 aa20.44■□□□□ 0.86
LRRC56-201ENST00000270115 SPG7Q9UQ90 795 aa20.44■□□□□ 0.86
LRRC56-201ENST00000270115 DLG5Q8TDM6 1919 aa20.43■□□□□ 0.86
LRRC56-201ENST00000270115 NME9Q86XW9 330 aa20.43■□□□□ 0.86
LRRC56-201ENST00000270115 IL17RAQ96F46 866 aa20.43■□□□□ 0.86
LRRC56-201ENST00000270115 TRMT1Q9NXH9 659 aaKnown RBP20.43■□□□□ 0.86
LRRC56-201ENST00000270115 A2ML1A8K2U0 1454 aa20.43■□□□□ 0.86
LRRC56-201ENST00000270115 NECAB1Q8N987 351 aa20.43■□□□□ 0.86
LRRC56-201ENST00000270115 RAD50Q92878 1312 aa20.43■□□□□ 0.86
LRRC56-201ENST00000270115 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.42■□□□□ 0.86
LRRC56-201ENST00000270115 CAPN2P17655 700 aa20.42■□□□□ 0.86
LRRC56-201ENST00000270115 HAP1P54257 671 aaPredicted RBP20.42■□□□□ 0.86
LRRC56-201ENST00000270115 DNAJC25Q9H1X3 360 aa20.42■□□□□ 0.86
LRRC56-201ENST00000270115 MAP2P11137 1827 aaKnown RBP20.42■□□□□ 0.86
LRRC56-201ENST00000270115 CHL1O00533 1208 aa20.41■□□□□ 0.86
LRRC56-201ENST00000270115 PTPN14Q15678 1187 aa20.41■□□□□ 0.86
LRRC56-201ENST00000270115 CWC27Q6UX04 472 aaKnown RBP20.41■□□□□ 0.86
LRRC56-201ENST00000270115 TFIP11Q9UBB9 837 aaKnown RBP20.41■□□□□ 0.86
LRRC56-201ENST00000270115 GOLGA6L4A6NEF3 574 aa20.4■□□□□ 0.86
LRRC56-201ENST00000270115 CCT4P50991 539 aaKnown RBP20.4■□□□□ 0.86
LRRC56-201ENST00000270115 CALCOCO1Q9P1Z2 691 aa20.4■□□□□ 0.86
LRRC56-201ENST00000270115 STAP2Q9UGK3 403 aa20.4■□□□□ 0.86
LRRC56-201ENST00000270115 SPATA31D1Q6ZQQ2 1576 aa20.4■□□□□ 0.86
LRRC56-201ENST00000270115 ZNF165P49910 485 aa20.4■□□□□ 0.86
LRRC56-201ENST00000270115 HYPKQ9NX55 129 aa20.4■□□□□ 0.86
LRRC56-201ENST00000270115 CPSF1Q10570 1443 aaKnown RBP20.4■□□□□ 0.86
LRRC56-201ENST00000270115 KRT85P78386 507 aa20.4■□□□□ 0.86
LRRC56-201ENST00000270115 SGSM2O43147 1006 aa20.39■□□□□ 0.85
LRRC56-201ENST00000270115 GTF3C6Q969F1 213 aa20.39■□□□□ 0.85
LRRC56-201ENST00000270115 PTPRMP28827 1452 aa20.39■□□□□ 0.85
LRRC56-201ENST00000270115 LARP1BQ659C4 914 aaKnown RBP20.39■□□□□ 0.85
LRRC56-201ENST00000270115 DNAJC2Q99543 621 aaKnown RBP20.39■□□□□ 0.85
LRRC56-201ENST00000270115 CHMP4AQ9BY43 222 aa20.39■□□□□ 0.85
LRRC56-201ENST00000270115 LSG1Q9H089 658 aaKnown RBP20.39■□□□□ 0.85
LRRC56-201ENST00000270115 SULT6B1Q6IMI4 303 aa20.38■□□□□ 0.85
LRRC56-201ENST00000270115 CDC37L1Q7L3B6 337 aa20.38■□□□□ 0.85
LRRC56-201ENST00000270115 LRRC8AQ8IWT6 810 aa20.38■□□□□ 0.85
LRRC56-201ENST00000270115 NECTIN2Q92692 538 aa20.38■□□□□ 0.85
LRRC56-201ENST00000270115 ZNF446Q9NWS9 450 aa20.38■□□□□ 0.85
LRRC56-201ENST00000270115 ADCK5Q3MIX3 580 aa20.38■□□□□ 0.85
LRRC56-201ENST00000270115 JAKMIP1Q96N16 626 aaKnown RBP20.38■□□□□ 0.85
LRRC56-201ENST00000270115 PDRG1Q9NUG6 133 aa20.38■□□□□ 0.85
LRRC56-201ENST00000270115 ALKQ9UM73 1620 aa20.38■□□□□ 0.85
LRRC56-201ENST00000270115 ATP8B2P98198 1209 aa20.37■□□□□ 0.85
LRRC56-201ENST00000270115 NOL10Q9BSC4 688 aaKnown RBP20.37■□□□□ 0.85
LRRC56-201ENST00000270115 LRRFIP2Q9Y608 721 aaKnown RBP20.37■□□□□ 0.85
LRRC56-201ENST00000270115 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.37■□□□□ 0.85
LRRC56-201ENST00000270115 FAM53CQ9NYF3 392 aa20.37■□□□□ 0.85
LRRC56-201ENST00000270115 SKILP12757 684 aa20.36■□□□□ 0.85
LRRC56-201ENST00000270115 FILIP1Q7Z7B0 1213 aa20.36■□□□□ 0.85
LRRC56-201ENST00000270115 TDRD7Q8NHU6 1098 aaKnown RBP20.36■□□□□ 0.85
LRRC56-201ENST00000270115 SYTL4Q96C24 671 aaPredicted RBP20.36■□□□□ 0.85
LRRC56-201ENST00000270115 TRIM34Q9BYJ4 488 aa20.36■□□□□ 0.85
LRRC56-201ENST00000270115 KIF20BQ96Q89 1820 aa20.36■□□□□ 0.85
LRRC56-201ENST00000270115 ST3GAL1Q11201 340 aa20.36■□□□□ 0.85
LRRC56-201ENST00000270115 HNRNPH2P55795 449 aaKnown RBP20.35■□□□□ 0.85
LRRC56-201ENST00000270115 ME3Q16798 604 aa20.35■□□□□ 0.85
LRRC56-201ENST00000270115 TXNDC2Q86VQ3 553 aa20.35■□□□□ 0.85
LRRC56-201ENST00000270115 ERO1AQ96HE7 468 aa20.35■□□□□ 0.85
LRRC56-201ENST00000270115 NR1I2O75469 434 aa20.35■□□□□ 0.85
LRRC56-201ENST00000270115 SPATA32Q96LK8 384 aa20.34■□□□□ 0.85
LRRC56-201ENST00000270115 USP16Q9Y5T5 823 aa20.34■□□□□ 0.85
LRRC56-201ENST00000270115 CCDC171Q6TFL3 1326 aa20.34■□□□□ 0.85
LRRC56-201ENST00000270115 NCKAP5LQ9HCH0 1330 aa20.34■□□□□ 0.85
LRRC56-201ENST00000270115 TULP2O00295 520 aa20.34■□□□□ 0.85
LRRC56-201ENST00000270115 PRPF40BQ6NWY9 871 aaKnown RBP20.34■□□□□ 0.85
LRRC56-201ENST00000270115 ERCC6LQ2NKX8 1250 aa20.34■□□□□ 0.85
LRRC56-201ENST00000270115 ERBB3P21860 1342 aa20.33■□□□□ 0.85
LRRC56-201ENST00000270115 SLU7O95391 586 aaKnown RBP20.33■□□□□ 0.85
LRRC56-201ENST00000270115 NYAP1Q6ZVC0 841 aa20.33■□□□□ 0.85
LRRC56-201ENST00000270115 BICD2Q8TD16 824 aa20.33■□□□□ 0.85
LRRC56-201ENST00000270115 TUBGCP6Q96RT7 1819 aa20.33■□□□□ 0.84
LRRC56-201ENST00000270115 GOLGA6L19H0YKK7 550 aa20.33■□□□□ 0.84
LRRC56-201ENST00000270115 TNRQ92752 1358 aa20.32■□□□□ 0.84
LRRC56-201ENST00000270115 GNAI3P08754 354 aa20.32■□□□□ 0.84
LRRC56-201ENST00000270115 PTH1RQ03431 593 aa20.32■□□□□ 0.84
LRRC56-201ENST00000270115 CLSTN2Q9H4D0 955 aa20.32■□□□□ 0.84
LRRC56-201ENST00000270115 SURF6O75683 361 aaKnown RBP20.32■□□□□ 0.84
LRRC56-201ENST00000270115 LRRN4CLQ8ND94 238 aa20.32■□□□□ 0.84
LRRC56-201ENST00000270115 KIF1BPQ96EK5 621 aa20.32■□□□□ 0.84
LRRC56-201ENST00000270115 METP08581 1390 aa20.31■□□□□ 0.84
LRRC56-201ENST00000270115 A0A087WWV3 80 aa20.31■□□□□ 0.84
LRRC56-201ENST00000270115 CCDC69A6NI79 296 aa20.31■□□□□ 0.84
LRRC56-201ENST00000270115 CYP2C19P33261 490 aa20.31■□□□□ 0.84
LRRC56-201ENST00000270115 PI4K2BQ8TCG2 481 aa20.31■□□□□ 0.84
LRRC56-201ENST00000270115 CYP46A1Q9Y6A2 500 aa20.31■□□□□ 0.84
LRRC56-201ENST00000270115 EPB41L2O43491 1005 aaKnown RBP20.31■□□□□ 0.84
LRRC56-201ENST00000270115 TSPYL4Q9UJ04 414 aa20.31■□□□□ 0.84
LRRC56-201ENST00000270115 BMS1Q14692 1282 aaKnown RBP20.3■□□□□ 0.84
LRRC56-201ENST00000270115 CERS3Q8IU89 383 aa20.3■□□□□ 0.84
LRRC56-201ENST00000270115 COG3Q96JB2 828 aa20.3■□□□□ 0.84
LRRC56-201ENST00000270115 DDX19AQ9NUU7 478 aaKnown RBP20.3■□□□□ 0.84
LRRC56-201ENST00000270115 TPCN1Q9ULQ1 816 aa20.3■□□□□ 0.84
LRRC56-201ENST00000270115 COL9A3Q14050 684 aaPredicted RBP20.3■□□□□ 0.84
LRRC56-201ENST00000270115 VPS53Q5VIR6 699 aa20.3■□□□□ 0.84
LRRC56-201ENST00000270115 CNTROBQ8N137 903 aa20.3■□□□□ 0.84
LRRC56-201ENST00000270115 TCEANC2Q96MN5 208 aa20.3■□□□□ 0.84
LRRC56-201ENST00000270115 POLR3GO15318 223 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms