RNA–Protein interactions for RNA: ENST00000269844.4

PRDM15-201, Transcript of PR/SET domain 15, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM15, Length 4,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-201ENST00000269844 CCDC6Q16204 474 aa16.63■□□□□ 0.25
PRDM15-201ENST00000269844 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.63■□□□□ 0.25
PRDM15-201ENST00000269844 CAPN7Q9Y6W3 813 aa16.63■□□□□ 0.25
PRDM15-201ENST00000269844 HMOX1P09601 288 aa16.63■□□□□ 0.25
PRDM15-201ENST00000269844 RLBP1P12271 317 aa16.63■□□□□ 0.25
PRDM15-201ENST00000269844 UBASH3AP57075 661 aa16.63■□□□□ 0.25
PRDM15-201ENST00000269844 BIRC2Q13490 618 aa16.63■□□□□ 0.25
PRDM15-201ENST00000269844 ANKRD62A6NC57 917 aa16.62■□□□□ 0.25
PRDM15-201ENST00000269844 PIP4K2BP78356 416 aa16.62■□□□□ 0.25
PRDM15-201ENST00000269844 MCTP2Q6DN12 878 aa16.62■□□□□ 0.25
PRDM15-201ENST00000269844 AOPEPQ8N6M6 819 aa16.62■□□□□ 0.25
PRDM15-201ENST00000269844 NCAPGQ9BPX3 1015 aa16.62■□□□□ 0.25
PRDM15-201ENST00000269844 RAD51AP2Q09MP3 1159 aa16.62■□□□□ 0.25
PRDM15-201ENST00000269844 SPA17Q15506 151 aa16.62■□□□□ 0.25
PRDM15-201ENST00000269844 RAPGEF4Q8WZA2 1011 aa16.62■□□□□ 0.25
PRDM15-201ENST00000269844 HMGB1P09429 215 aaKnown RBP16.62■□□□□ 0.25
PRDM15-201ENST00000269844 EIF2S2P20042 333 aaKnown RBP16.62■□□□□ 0.25
PRDM15-201ENST00000269844 SIL1Q9H173 461 aa16.62■□□□□ 0.25
PRDM15-201ENST00000269844 ERICH2A1L162 156 aa16.62■□□□□ 0.25
PRDM15-201ENST00000269844 HDAC1Q13547 482 aaPredicted RBP16.62■□□□□ 0.25
PRDM15-201ENST00000269844 CEP85LQ5SZL2 805 aa16.62■□□□□ 0.25
PRDM15-201ENST00000269844 CCAR1Q8IX12 1150 aaKnown RBP16.62■□□□□ 0.25
PRDM15-201ENST00000269844 FBXO3Q9UK99 471 aa16.62■□□□□ 0.25
PRDM15-201ENST00000269844 DNM1Q05193 864 aaKnown RBP16.61■□□□□ 0.25
PRDM15-201ENST00000269844 RNF168Q8IYW5 571 aaPredicted RBP16.61■□□□□ 0.25
PRDM15-201ENST00000269844 TRIM27P14373 513 aa16.61■□□□□ 0.25
PRDM15-201ENST00000269844 NUCB1Q02818 461 aa16.61■□□□□ 0.25
PRDM15-201ENST00000269844 ANKS4BQ8N8V4 417 aa16.61■□□□□ 0.25
PRDM15-201ENST00000269844 CTAGE9A4FU28 777 aa16.61■□□□□ 0.25
PRDM15-201ENST00000269844 CKAP4Q07065 602 aaKnown RBP16.61■□□□□ 0.25
PRDM15-201ENST00000269844 JADE2Q9NQC1 790 aa16.61■□□□□ 0.25
PRDM15-201ENST00000269844 FRMD3A2A2Y4 597 aa16.6■□□□□ 0.25
PRDM15-201ENST00000269844 DDX54Q8TDD1 881 aaKnown RBP16.6■□□□□ 0.25
PRDM15-201ENST00000269844 NUP88Q99567 741 aaPredicted RBP16.6■□□□□ 0.25
PRDM15-201ENST00000269844 CYB5RLQ6IPT4 315 aa16.6■□□□□ 0.25
PRDM15-201ENST00000269844 KLHL10Q6JEL2 608 aa16.6■□□□□ 0.25
PRDM15-201ENST00000269844 F13A1P00488 732 aa16.59■□□□□ 0.25
PRDM15-201ENST00000269844 NAA15Q9BXJ9 866 aaKnown RBP16.59■□□□□ 0.25
PRDM15-201ENST00000269844 SCAPERQ9BY12 1400 aa16.59■□□□□ 0.25
PRDM15-201ENST00000269844 MINK1Q8N4C8 1332 aaPredicted RBP16.59■□□□□ 0.25
PRDM15-201ENST00000269844 KIF1CO43896 1103 aaKnown RBP16.59■□□□□ 0.25
PRDM15-201ENST00000269844 MYCNP04198 464 aaPredicted RBP16.59■□□□□ 0.25
PRDM15-201ENST00000269844 DNA2P51530 1060 aa16.59■□□□□ 0.25
PRDM15-201ENST00000269844 EFCAB13Q8IY85 973 aa16.59■□□□□ 0.25
PRDM15-201ENST00000269844 FBF1Q8TES7 1133 aa16.59■□□□□ 0.25
PRDM15-201ENST00000269844 ATF3P18847 181 aa16.59■□□□□ 0.25
PRDM15-201ENST00000269844 ACTN2P35609 894 aa16.59■□□□□ 0.25
PRDM15-201ENST00000269844 PRPF40BQ6NWY9 871 aaKnown RBP16.59■□□□□ 0.25
PRDM15-201ENST00000269844 NEDD9Q14511 834 aa16.59■□□□□ 0.25
PRDM15-201ENST00000269844 CPLX4Q7Z7G2 160 aa16.59■□□□□ 0.25
PRDM15-201ENST00000269844 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.59■□□□□ 0.25
PRDM15-201ENST00000269844 MYOM3Q5VTT5 1437 aa16.59■□□□□ 0.25
PRDM15-201ENST00000269844 STIM1Q13586 685 aa16.58■□□□□ 0.25
PRDM15-201ENST00000269844 KARSQ15046 597 aaKnown RBP16.58■□□□□ 0.25
PRDM15-201ENST00000269844 OSCARQ8IYS5 282 aa16.58■□□□□ 0.25
PRDM15-201ENST00000269844 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.58■□□□□ 0.25
PRDM15-201ENST00000269844 PTPRGP23470 1445 aa16.58■□□□□ 0.25
PRDM15-201ENST00000269844 GOLGA6CA6NDK9 693 aa16.58■□□□□ 0.24
PRDM15-201ENST00000269844 CCDC160A6NGH7 325 aa16.58■□□□□ 0.24
PRDM15-201ENST00000269844 WDHD1O75717 1129 aaPredicted RBP16.58■□□□□ 0.24
PRDM15-201ENST00000269844 YEATS4O95619 227 aa16.58■□□□□ 0.24
PRDM15-201ENST00000269844 GOLGA6DP0CG33 693 aa16.58■□□□□ 0.24
PRDM15-201ENST00000269844 GOLGA6AQ9NYA3 693 aa16.58■□□□□ 0.24
PRDM15-201ENST00000269844 PCK1P35558 622 aa16.58■□□□□ 0.24
PRDM15-201ENST00000269844 ZNF75DP51815 510 aa16.58■□□□□ 0.24
PRDM15-201ENST00000269844 SPATA24Q86W54 205 aa16.58■□□□□ 0.24
PRDM15-201ENST00000269844 LMNTD2Q8IXW0 634 aa16.58■□□□□ 0.24
PRDM15-201ENST00000269844 TTC22Q5TAA0 569 aa16.57■□□□□ 0.24
PRDM15-201ENST00000269844 IL1RAPL2Q9NP60 686 aa16.57■□□□□ 0.24
PRDM15-201ENST00000269844 EXOC6BQ9Y2D4 811 aa16.57■□□□□ 0.24
PRDM15-201ENST00000269844 RPUSD2Q8IZ73 545 aaKnown RBP16.57■□□□□ 0.24
PRDM15-201ENST00000269844 UTP14AQ9BVJ6 771 aaKnown RBP16.57■□□□□ 0.24
PRDM15-201ENST00000269844 TSPYL4Q9UJ04 414 aa16.57■□□□□ 0.24
PRDM15-201ENST00000269844 DDX41Q9UJV9 622 aaKnown RBP16.57■□□□□ 0.24
PRDM15-201ENST00000269844 GCOM1H8Y6P7 765 aaPredicted RBP16.57■□□□□ 0.24
PRDM15-201ENST00000269844 RAB11FIP3O75154 756 aa16.57■□□□□ 0.24
PRDM15-201ENST00000269844 MYZAPP0CAP1 466 aa16.57■□□□□ 0.24
PRDM15-201ENST00000269844 XBP1P17861 261 aa16.57■□□□□ 0.24
PRDM15-201ENST00000269844 ARFGAP2Q8N6H7 521 aa16.57■□□□□ 0.24
PRDM15-201ENST00000269844 ANTXR1Q9H6X2 564 aa16.57■□□□□ 0.24
PRDM15-201ENST00000269844 PYCARDQ9ULZ3 195 aa16.57■□□□□ 0.24
PRDM15-201ENST00000269844 JPH2Q9BR39 696 aaPredicted RBP16.57■□□□□ 0.24
PRDM15-201ENST00000269844 HFM1A2PYH4 1435 aa16.57■□□□□ 0.24
PRDM15-201ENST00000269844 RAD50Q92878 1312 aa16.56■□□□□ 0.24
PRDM15-201ENST00000269844 USO1O60763 962 aaKnown RBP16.56■□□□□ 0.24
PRDM15-201ENST00000269844 SYCP1Q15431 976 aa16.56■□□□□ 0.24
PRDM15-201ENST00000269844 GOPCQ9HD26 462 aa16.56■□□□□ 0.24
PRDM15-201ENST00000269844 FEZ2Q9UHY8 353 aaPredicted RBP16.56■□□□□ 0.24
PRDM15-201ENST00000269844 CHMP4BP1P59074 171 aa16.56■□□□□ 0.24
PRDM15-201ENST00000269844 MMS22LQ6ZRQ5 1243 aa16.56■□□□□ 0.24
PRDM15-201ENST00000269844 DNAJC5BQ9UF47 199 aa16.56■□□□□ 0.24
PRDM15-201ENST00000269844 ODF2LQ9ULJ1 636 aa16.56■□□□□ 0.24
PRDM15-201ENST00000269844 SEPT6Q14141 434 aa16.56■□□□□ 0.24
PRDM15-201ENST00000269844 ZNF428Q96B54 188 aa16.56■□□□□ 0.24
PRDM15-201ENST00000269844 SLC24A3Q9HC58 644 aa16.56■□□□□ 0.24
PRDM15-201ENST00000269844 LZTFL1Q9NQ48 299 aa16.56■□□□□ 0.24
PRDM15-201ENST00000269844 A0A087WUV0 522 aaPredicted RBP16.55■□□□□ 0.24
PRDM15-201ENST00000269844 MAGEA9P43362 315 aa16.55■□□□□ 0.24
PRDM15-201ENST00000269844 ZSCAN25Q6NSZ9 544 aa16.55■□□□□ 0.24
PRDM15-201ENST00000269844 TMEM51Q9NW97 253 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms