RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 DYNC1I1O14576 645 aa20.49■□□□□ 0.87
SPG7-201ENST00000268704 CEBPAP49715 358 aaPredicted RBP20.49■□□□□ 0.87
SPG7-201ENST00000268704 OS9Q13438 667 aaPredicted RBP20.49■□□□□ 0.87
SPG7-201ENST00000268704 COL9A3Q14050 684 aaPredicted RBP20.49■□□□□ 0.87
SPG7-201ENST00000268704 ZHX1Q9UKY1 873 aaPredicted RBP20.49■□□□□ 0.87
SPG7-201ENST00000268704 UBE2HP62256 183 aa20.48■□□□□ 0.87
SPG7-201ENST00000268704 GJB2P29033 226 aa20.48■□□□□ 0.87
SPG7-201ENST00000268704 LGR6Q9HBX8 967 aa20.48■□□□□ 0.87
SPG7-201ENST00000268704 FAM177BA6PVY3 158 aa20.47■□□□□ 0.87
SPG7-201ENST00000268704 PRPF40BQ6NWY9 871 aaKnown RBP20.47■□□□□ 0.87
SPG7-201ENST00000268704 C14orf37Q86TY3 774 aa20.47■□□□□ 0.87
SPG7-201ENST00000268704 JAKMIP1Q96N16 626 aaKnown RBP20.47■□□□□ 0.87
SPG7-201ENST00000268704 HYPKQ9NX55 129 aa20.47■□□□□ 0.87
SPG7-201ENST00000268704 FAM184AQ8NB25 1140 aa20.47■□□□□ 0.87
SPG7-201ENST00000268704 AP5Z1O43299 807 aa20.47■□□□□ 0.87
SPG7-201ENST00000268704 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.47■□□□□ 0.87
SPG7-201ENST00000268704 PLEKHG1Q9ULL1 1385 aa20.47■□□□□ 0.87
SPG7-201ENST00000268704 BEND3Q5T5X7 828 aa20.46■□□□□ 0.87
SPG7-201ENST00000268704 NECAB1Q8N987 351 aa20.46■□□□□ 0.87
SPG7-201ENST00000268704 DIAPH3Q9NSV4 1193 aa20.46■□□□□ 0.87
SPG7-201ENST00000268704 PA2G4Q9UQ80 394 aaKnown RBP20.46■□□□□ 0.87
SPG7-201ENST00000268704 VPS37CA5D8V6 355 aaPredicted RBP20.46■□□□□ 0.87
SPG7-201ENST00000268704 ST3GAL1Q11201 340 aa20.46■□□□□ 0.87
SPG7-201ENST00000268704 CHMP3Q9Y3E7 222 aa20.46■□□□□ 0.87
SPG7-201ENST00000268704 NOLC1Q14978 699 aaKnown RBP eCLIP20.45■□□□□ 0.86
SPG7-201ENST00000268704 DNAAF4Q8WXU2 420 aa20.45■□□□□ 0.86
SPG7-201ENST00000268704 PIBF1Q8WXW3 757 aa20.45■□□□□ 0.86
SPG7-201ENST00000268704 DIP2AQ14689 1571 aa20.45■□□□□ 0.86
SPG7-201ENST00000268704 UVSSAQ2YD98 709 aa20.45■□□□□ 0.86
SPG7-201ENST00000268704 MTMR6Q9Y217 621 aa20.45■□□□□ 0.86
SPG7-201ENST00000268704 EPB41L2O43491 1005 aaKnown RBP20.44■□□□□ 0.86
SPG7-201ENST00000268704 ABTB2Q8N961 1025 aa20.44■□□□□ 0.86
SPG7-201ENST00000268704 PDRG1Q9NUG6 133 aa20.44■□□□□ 0.86
SPG7-201ENST00000268704 EIF4A1P60842 406 aaKnown RBP20.43■□□□□ 0.86
SPG7-201ENST00000268704 FAM173BQ6P4H8 233 aa20.43■□□□□ 0.86
SPG7-201ENST00000268704 FUCA2Q9BTY2 467 aa20.43■□□□□ 0.86
SPG7-201ENST00000268704 PRDM4Q9UKN5 801 aa20.43■□□□□ 0.86
SPG7-201ENST00000268704 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.43■□□□□ 0.86
SPG7-201ENST00000268704 KDM4AO75164 1064 aa20.42■□□□□ 0.86
SPG7-201ENST00000268704 FERMT3Q86UX7 667 aa20.42■□□□□ 0.86
SPG7-201ENST00000268704 TCEANC2Q96MN5 208 aa20.42■□□□□ 0.86
SPG7-201ENST00000268704 ME3Q16798 604 aa20.42■□□□□ 0.86
SPG7-201ENST00000268704 MAP7D2Q96T17 732 aa20.42■□□□□ 0.86
SPG7-201ENST00000268704 MARF1Q9Y4F3 1742 aaKnown RBP20.42■□□□□ 0.86
SPG7-201ENST00000268704 SPC24Q8NBT2 197 aa20.42■□□□□ 0.86
SPG7-201ENST00000268704 MYRIPQ8NFW9 859 aa20.42■□□□□ 0.86
SPG7-201ENST00000268704 GLRX3O76003 335 aaKnown RBP20.41■□□□□ 0.86
SPG7-201ENST00000268704 ADCY9O60503 1353 aa20.41■□□□□ 0.86
SPG7-201ENST00000268704 CRYBG1Q9Y4K1 1723 aa20.4■□□□□ 0.86
SPG7-201ENST00000268704 FAM227BQ96M60 508 aa20.4■□□□□ 0.86
SPG7-201ENST00000268704 CLASRPQ8N2M8 674 aaKnown RBP20.4■□□□□ 0.86
SPG7-201ENST00000268704 PROSER3Q2NL68 480 aa20.39■□□□□ 0.85
SPG7-201ENST00000268704 CWF19L2Q2TBE0 894 aaKnown RBP20.39■□□□□ 0.85
SPG7-201ENST00000268704 ATP6V1DQ9Y5K8 247 aa20.39■□□□□ 0.85
SPG7-201ENST00000268704 CYP46A1Q9Y6A2 500 aa20.39■□□□□ 0.85
SPG7-201ENST00000268704 LETM1O95202 739 aaPredicted RBP20.39■□□□□ 0.85
SPG7-201ENST00000268704 CAMK4Q16566 473 aa20.39■□□□□ 0.85
SPG7-201ENST00000268704 NBPF6Q5VWK0 638 aa20.39■□□□□ 0.85
SPG7-201ENST00000268704 NBPF4Q96M43 638 aa20.39■□□□□ 0.85
SPG7-201ENST00000268704 KCNF1Q9H3M0 494 aa20.39■□□□□ 0.85
SPG7-201ENST00000268704 TPCN1Q9ULQ1 816 aa20.39■□□□□ 0.85
SPG7-201ENST00000268704 VPS53Q5VIR6 699 aa20.38■□□□□ 0.85
SPG7-201ENST00000268704 ZNF710Q8N1W2 664 aa20.38■□□□□ 0.85
SPG7-201ENST00000268704 PYCARDQ9ULZ3 195 aa20.38■□□□□ 0.85
SPG7-201ENST00000268704 TAF6LQ9Y6J9 622 aa20.38■□□□□ 0.85
SPG7-201ENST00000268704 TTC41PQ6P2S7 1318 aa20.38■□□□□ 0.85
SPG7-201ENST00000268704 KDM4FA0A1W2PPD8 638 aa20.38■□□□□ 0.85
SPG7-201ENST00000268704 MPRIPQ6WCQ1 1025 aa20.38■□□□□ 0.85
SPG7-201ENST00000268704 CDC37L1Q7L3B6 337 aa20.38■□□□□ 0.85
SPG7-201ENST00000268704 ZSWIM6Q9HCJ5 1215 aa20.38■□□□□ 0.85
SPG7-201ENST00000268704 ECHDC1Q9NTX5 307 aa20.38■□□□□ 0.85
SPG7-201ENST00000268704 EID1Q9Y6B2 187 aa20.38■□□□□ 0.85
SPG7-201ENST00000268704 CEMIPQ8WUJ3 1361 aa20.38■□□□□ 0.85
SPG7-201ENST00000268704 PRAMEF22A3QJZ6 481 aa20.38■□□□□ 0.85
SPG7-201ENST00000268704 AACSQ86V21 672 aa20.38■□□□□ 0.85
SPG7-201ENST00000268704 IFIT2P09913 472 aaKnown RBP20.37■□□□□ 0.85
SPG7-201ENST00000268704 KCNJ4P48050 445 aa20.37■□□□□ 0.85
SPG7-201ENST00000268704 BABAM1Q9NWV8 329 aa20.37■□□□□ 0.85
SPG7-201ENST00000268704 MAP3K2Q9Y2U5 619 aa20.37■□□□□ 0.85
SPG7-201ENST00000268704 RBM8AQ9Y5S9 174 aaKnown RBP20.37■□□□□ 0.85
SPG7-201ENST00000268704 USP42Q9H9J4 1324 aaKnown RBP20.37■□□□□ 0.85
SPG7-201ENST00000268704 TTC6Q86TZ1 520 aa20.37■□□□□ 0.85
SPG7-201ENST00000268704 C9orf78Q9NZ63 289 aaPredicted RBP20.37■□□□□ 0.85
SPG7-201ENST00000268704 CCDC171Q6TFL3 1326 aa20.36■□□□□ 0.85
SPG7-201ENST00000268704 RUFY2Q8WXA3 655 aa20.36■□□□□ 0.85
SPG7-201ENST00000268704 NECTIN1Q15223 517 aa20.36■□□□□ 0.85
SPG7-201ENST00000268704 HSP90AB4PQ58FF6 505 aa20.36■□□□□ 0.85
SPG7-201ENST00000268704 LRRC59Q96AG4 307 aaKnown RBP20.36■□□□□ 0.85
SPG7-201ENST00000268704 LIG1P18858 919 aa20.35■□□□□ 0.85
SPG7-201ENST00000268704 CCDC8Q9H0W5 538 aaPredicted RBP20.35■□□□□ 0.85
SPG7-201ENST00000268704 TLR7Q9NYK1 1049 aaKnown RBP20.35■□□□□ 0.85
SPG7-201ENST00000268704 BTBD11A6QL63 1104 aa20.35■□□□□ 0.85
SPG7-201ENST00000268704 NMIQ13287 307 aaPredicted RBP20.35■□□□□ 0.85
SPG7-201ENST00000268704 CREB3L3Q68CJ9 461 aa20.35■□□□□ 0.85
SPG7-201ENST00000268704 LARP1BQ659C4 914 aaKnown RBP20.35■□□□□ 0.85
SPG7-201ENST00000268704 RBM33Q96EV2 1170 aaKnown RBP20.35■□□□□ 0.85
SPG7-201ENST00000268704 ADAMTSL3P82987 1691 aa20.34■□□□□ 0.85
SPG7-201ENST00000268704 TEFQ10587 303 aa20.34■□□□□ 0.85
SPG7-201ENST00000268704 CKAP2LQ8IYA6 745 aa20.34■□□□□ 0.85
SPG7-201ENST00000268704 SPTLC3Q9NUV7 552 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms